The Microbial Models Of Molecular Biology

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Microbial Systems Biology

Author : Ali Navid
Publisher : Humana Press
ISBN 13 : 9781617798269
Total Pages : 0 pages
Book Rating : 4.7/5 (982 download)

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Book Synopsis Microbial Systems Biology by : Ali Navid

Download or read book Microbial Systems Biology written by Ali Navid and published by Humana Press. This book was released on 2012-05-27 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Systems biology is the study of interactions between assorted components of biological systems with the aim of acquiring new insights into how organisms function and respond to different stimuli. Although more and more efforts are being directed toward examining systems biology in complex multi-cellular organisms, the bulk of system-level analyses conducted to date have focused on the biology of microbes. In, Microbial Systems Biology: Methods and Protocols expert researchers in the field describe the utility and attributes of different tools (both experimental and computational) that are used for studying microbial systems. Written in the highly successful Methods in Molecular BiologyTM series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Microbial Systems Biology: Methods and Protocols introduces and aids scientists in using the various tools that are currently available for analysis, modification and utilization of microbial organisms.

The Microbial Models of Molecular Biology

Author : Rowland H. Davis
Publisher : Oxford University Press
ISBN 13 : 9780195348316
Total Pages : 372 pages
Book Rating : 4.3/5 (483 download)

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Book Synopsis The Microbial Models of Molecular Biology by : Rowland H. Davis

Download or read book The Microbial Models of Molecular Biology written by Rowland H. Davis and published by Oxford University Press. This book was released on 2003-09-11 with total page 372 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book explains the role of simple biological model systems in the growth of molecular biology. Essentially the whole history of molecular biology is presented here, tracing the work in bacteriophages in E. coli, the role of other prokaryotic systems, and also the protozoan and algal models - Paramecium and Chlamydomonas, primarily - and the move into eukaryotes with the fungal systems - Neurospora, Aspergillus and yeast. Each model was selected for its appropriateness for asking a given class of questions, and each spawned its own community of investigators. Some individuals made the transition to a new model over time, and remnant communities of investigators continue to pursue questions in all these models, as the cutting edge of molecular biological research flowed onward from model to model, and onward into higher organisms and, ultimately, mouse and man.

Snyder and Champness Molecular Genetics of Bacteria

Author : Tina M. Henkin
Publisher : John Wiley & Sons
ISBN 13 : 1555819753
Total Pages : 642 pages
Book Rating : 4.5/5 (558 download)

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Book Synopsis Snyder and Champness Molecular Genetics of Bacteria by : Tina M. Henkin

Download or read book Snyder and Champness Molecular Genetics of Bacteria written by Tina M. Henkin and published by John Wiley & Sons. This book was released on 2020-10-27 with total page 642 pages. Available in PDF, EPUB and Kindle. Book excerpt: The single most comprehensive and authoritative textbook on bacterial molecular genetics Snyder & Champness Molecular Genetics of Bacteria is a new edition of a classic text, updated to address the massive advances in the ﬁeld of bacterial molecular genetics and retitled as homage to the founding authors. In an era experiencing an avalanche of new genetic sequence information, this updated edition presents important experiments and advanced material relevant to current applications of molecular genetics, including conclusions from and applications of genomics; the relationships among recombination, replication, and repair and the importance of organizing sequences in DNA; the mechanisms of regulation of gene expression; the newest advances in bacterial cell biology; and the coordination of cellular processes during the bacterial cell cycle. The topics are integrated throughout with biochemical, genomic, and structural information, allowing readers to gain a deeper understanding of modern bacterial molecular genetics and its relationship to other ﬁelds of modern biology. Although the text is centered on the most-studied bacteria, Escherichia coli and Bacillus subtilis, many examples are drawn from other bacteria of experimental, medical, ecological, and biotechnological importance. The book's many useful features include Text boxes to help students make connections to relevant topics related to other organisms, including humans A summary of main points at the end of each chapter Questions for discussion and independent thought A list of suggested readings for background and further investigation in each chapter Fully illustrated with detailed diagrams and photos in full color A glossary of terms highlighted in the text While intended as an undergraduate or beginning graduate textbook, Molecular Genetics of Bacteria is an invaluable reference for anyone working in the ﬁelds of microbiology, genetics, biochemistry, bioengineering, medicine, molecular biology, and biotechnology. "This is a marvelous textbook that is completely up-to-date and comprehensive, but not overwhelming. The clear prose and excellent ﬁgures make it ideal for use in teaching bacterial molecular genetics." —Caroline Harwood, University of Washington

Bacterial Molecular Networks

Author : Denis Thieffry
Publisher : Humana Press
ISBN 13 : 9781493961566
Total Pages : 560 pages
Book Rating : 4.9/5 (615 download)

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Book Synopsis Bacterial Molecular Networks by : Denis Thieffry

Download or read book Bacterial Molecular Networks written by Denis Thieffry and published by Humana Press. This book was released on 2016-05-01 with total page 560 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bacterial Molecular Networks provides authoritative descriptions of various experimental and computational methods that enable the characterization and analysis of molecular interaction networks.

Systems Microbiology

Author : Brian Douglas Robertson
Publisher :
ISBN 13 : 9781912530458
Total Pages : 0 pages
Book Rating : 4.5/5 (34 download)

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Book Synopsis Systems Microbiology by : Brian Douglas Robertson

Download or read book Systems Microbiology written by Brian Douglas Robertson and published by . This book was released on 2012 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume contains cutting-edge reviews by world-leading experts on the systems biology of microorganisms. As well as covering theoretical approaches and mathematical modelling this book includes case studies on single microbial species of bacteria and archaea, and explores the systems analysis of microbial phenomena such as chemotaxis and phagocytosis. Topics covered include mathematical models for systems biology, systems biology of Escherichia coli metabolism, bacterial chemotaxis, systems biology of infection, host-microbe interactions, phagocytosis, system-level study of metabolism in M.

Landmark Experiments in Molecular Biology

Author : Michael Fry
Publisher : Academic Press
ISBN 13 : 012802108X
Total Pages : 572 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Landmark Experiments in Molecular Biology by : Michael Fry

Download or read book Landmark Experiments in Molecular Biology written by Michael Fry and published by Academic Press. This book was released on 2016-06-10 with total page 572 pages. Available in PDF, EPUB and Kindle. Book excerpt: Landmark Experiments in Molecular Biology critically considers breakthrough experiments that have constituted major turning points in the birth and evolution of molecular biology. These experiments laid the foundations to molecular biology by uncovering the major players in the machinery of inheritance and biological information handling such as DNA, RNA, ribosomes, and proteins. Landmark Experiments in Molecular Biology combines an historical survey of the development of ideas, theories, and profiles of leading scientists with detailed scientific and technical analysis. - Includes detailed analysis of classically designed and executed experiments - Incorporates technical and scientific analysis along with historical background for a robust understanding of molecular biology discoveries - Provides critical analysis of the history of molecular biology to inform the future of scientific discovery - Examines the machinery of inheritance and biological information handling

The Microbial Models of Molecular Biology

Author : Rowland H. Davis
Publisher : Oxford University Press
ISBN 13 : 0190288558
Total Pages : 352 pages
Book Rating : 4.1/5 (92 download)

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Book Synopsis The Microbial Models of Molecular Biology by : Rowland H. Davis

Download or read book The Microbial Models of Molecular Biology written by Rowland H. Davis and published by Oxford University Press. This book was released on 2003-09-11 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book explains the role of simple biological model systems in the growth of molecular biology. Essentially the whole history of molecular biology is presented here, tracing the work in bacteriophages in E. coli, the role of other prokaryotic systems, and also the protozoan and algal models - Paramecium and Chlamydomonas, primarily - and the move into eukaryotes with the fungal systems - Neurospora, Aspergillus and yeast. Each model was selected for its appropriateness for asking a given class of questions, and each spawned its own community of investigators. Some individuals made the transition to a new model over time, and remnant communities of investigators continue to pursue questions in all these models, as the cutting edge of molecular biological research flowed onward from model to model, and onward into higher organisms and, ultimately, mouse and man.

Systems Biology

Author : Fred Boogerd
Publisher : Elsevier
ISBN 13 : 0080475272
Total Pages : 361 pages
Book Rating : 4.0/5 (84 download)

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Book Synopsis Systems Biology by : Fred Boogerd

Download or read book Systems Biology written by Fred Boogerd and published by Elsevier. This book was released on 2007-03-20 with total page 361 pages. Available in PDF, EPUB and Kindle. Book excerpt: Systems biology is a vigorous and expanding discipline, in many ways a successor to genomics and perhaps unprecedented in its combination of biology with a great many other sciences, from physics to ecology, from mathematics to medicine, and from philosophy to chemistry. Studying the philosophical foundations of systems biology may resolve a longer standing issue, i.e., the extent to which Biology is entitled to its own scientific foundations rather than being dominated by existing philosophies.* Answers the question of what distinguishes the living from the non-living* An in-depth look to a vigorous and expanding discipline, from molecule to system* Explores the region between individual components and the system

Type IV Secretion in Gram-Negative and Gram-Positive Bacteria

Author : Steffen Backert
Publisher : Springer
ISBN 13 : 3319752413
Total Pages : 364 pages
Book Rating : 4.3/5 (197 download)

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Book Synopsis Type IV Secretion in Gram-Negative and Gram-Positive Bacteria by : Steffen Backert

Download or read book Type IV Secretion in Gram-Negative and Gram-Positive Bacteria written by Steffen Backert and published by Springer. This book was released on 2018-03-13 with total page 364 pages. Available in PDF, EPUB and Kindle. Book excerpt: Type IV secretion systems (T4SSs) are highly versatile membrane-associated transporter machines used by Gram-negative and Gram-positive bacteria to deliver substrate molecules to a large variety of target cells. This volume summarizes our current knowledge of the large variety and structural diversity of T4SSs in pathogenic Escherichia, Agrobacterium, Legionella, Coxiella, Bartonella, Helicobacter, Enterococcus and other species. Divided into 13 chapters contributed by leading experts, it presents findings that significantly enhance our understanding of how various pathogens manipulate host cell functions to trigger bacterial uptake, promote intracellular growth, suppress defense mechanisms and of how bacteria spread antibiotic resistances, thus facilitating bacterial colonization and disease development. The book is an invaluable source of information for researchers and clinicians.

Regulating with RNA in Bacteria and Archaea

Author : Gisela Storz
Publisher : John Wiley & Sons
ISBN 13 : 1683672941
Total Pages : 1102 pages
Book Rating : 4.6/5 (836 download)

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Book Synopsis Regulating with RNA in Bacteria and Archaea by : Gisela Storz

Download or read book Regulating with RNA in Bacteria and Archaea written by Gisela Storz and published by John Wiley & Sons. This book was released on 2018-11-01 with total page 1102 pages. Available in PDF, EPUB and Kindle. Book excerpt: Revealing the many roles of RNA in regulating gene expression For decades after the discoveries of messenger RNA, transfer RNA, and ribosomal RNA, it was largely assumed that the role of RNA in the cell was limited to shuttling the genomic message, chaperoning amino acids, and toiling in the ribosomes. Eventually, hints that RNA molecules might have regulatory roles began to appear. With the advent of genomics and bioinformatics, it became evident that numerous other RNA forms exist and have specific functions, including small RNAs (sRNA), RNA thermometers, and riboswitches to regulate core metabolic pathways, bacterial pathogenesis, iron homeostasis, quorum sensing, and biofilm formation. All of these functions, and more, are presented in Regulating with RNA in Bacteria and Archaea, written by RNA biologists from around the globe. Divided into eight sections-RNases and Helicases, Cis-Acting RNAs, Cis Encoded Base Pairing RNAs, Trans-Encoded Base Pairing RNAs, Protein Titration and Scaffolding, General Considerations, Emerging Topics, and Resources-this book serves as an excellent resource for established RNA biologists and for the many scientists who are studying regulated cellular systems. It is no longer a fair assumption that gene expression regulation is the provenance of proteins only or that control is exerted primarily at the level of transcription. This book makes clear that regulatory RNAs are key partners along with proteins in controlling the complex interactions and pathways found within prokaryotes.

Microbial Biodegradation

Author : Eduardo Díaz
Publisher :
ISBN 13 : 9781913652203
Total Pages : pages
Book Rating : 4.6/5 (522 download)

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Book Synopsis Microbial Biodegradation by : Eduardo Díaz

Download or read book Microbial Biodegradation written by Eduardo Díaz and published by . This book was released on 2008 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: In this timely book expert international authors critically review all of the most important topics in this exciting field. Although other books covering this are currently available, this book is unique in that it is the first to review the area from a molecular biology and genomics perspective. Topics covered include: aerobic and anaerobic biodegradation of aromatic compounds, molecular detection methods (e.g. microautoradiography, mRNA analyses, etc.), genome-based predictive modelling, elucidation of regulatory networks, bioavailability, chemotaxis and transport issues, functional genomic.

Molecular Biology of the Cell

Author :
Publisher :
ISBN 13 : 9780815332183
Total Pages : 0 pages
Book Rating : 4.3/5 (321 download)

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Book Synopsis Molecular Biology of the Cell by :

Download or read book Molecular Biology of the Cell written by and published by . This book was released on 2002 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Microbial Evolution

Author : Howard Ochman
Publisher :
ISBN 13 : 9781621820376
Total Pages : 0 pages
Book Rating : 4.8/5 (23 download)

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Book Synopsis Microbial Evolution by : Howard Ochman

Download or read book Microbial Evolution written by Howard Ochman and published by . This book was released on 2016 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bacteria have been the dominant forms of life on Earth for the past 3.5 billion years. They rapidly evolve, constantly changing their genetic architecture through horizontal DNA transfer and other mechanisms. Consequently, it can be difficult to define individual species and determine how they are related. Written and edited by experts in the field, this collection from Cold Spring Harbor Perspectives in Biology examines how bacteria and other microbes evolve, focusing on insights from genomics-based studies. Contributors discuss the origins of new microbial populations, the evolutionary and ecological mechanisms that keep species separate once they have diverged, and the challenges of constructing phylogenetic trees that accurately reflect their relationships. They describe the organization of microbial genomes, the various mutations that occur, including the birth of new genes de novo and by duplication, and how natural selection acts on those changes. The role of horizontal gene transfer as a strong driver of microbial evolution is emphasized throughout. The authors also explore the geologic evidence for early microbial evolution and describe the use of microbial evolution experiments to examine phenomena like natural selection. This volume will thus be essential reading for all microbial ecologists, population geneticists, and evolutionary biologists.

Microbial Communication

Author : Sarangam Majumdar
Publisher : Springer Nature
ISBN 13 : 9811574170
Total Pages : 182 pages
Book Rating : 4.8/5 (115 download)

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Book Synopsis Microbial Communication by : Sarangam Majumdar

Download or read book Microbial Communication written by Sarangam Majumdar and published by Springer Nature. This book was released on 2020-09-15 with total page 182 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book introduces the concept of bacterial communication systems from a mathematical modeling point of view. It sheds light on the research undertaken in the last three decades, and the mathematical models that have been proposed to understand the underlying mechanism of such systems. These communication systems are related to quorum sensing mechanisms and quorum sensing regulated processes such as biofilm formation, gene expression, bioluminescence, swarming and virulence. The book further describes the phenomenon of noise, and discusses how noise plays a crucial role in gene expression and the quorum sensing circuit operationusing a set of tools like frequency domain analysis, power spectral density, stochastic simulation and the whitening effect. It also explores various aspects of synthetic biology (related to bacterial communication), such as genetic toggle switch, bistable gene regulatory networks, transcriptional repressor systems, pattern formation, synthetic cooperation, predator-prey synthetic systems, dynamical quorum sensing, synchronized quorum of genetic clocks, role of noise in synthetic biology, the Turing test and stochastic Turing test.

The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling

Author : Johan H. J. Leveau
Publisher : Frontiers Media SA
ISBN 13 : 2889457494
Total Pages : 187 pages
Book Rating : 4.8/5 (894 download)

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Book Synopsis The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling by : Johan H. J. Leveau

Download or read book The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling written by Johan H. J. Leveau and published by Frontiers Media SA. This book was released on 2019-02-19 with total page 187 pages. Available in PDF, EPUB and Kindle. Book excerpt: Recent technological advances in single-cell microbiology, using flow cytometry, microfluidics, x-ray fluorescence microprobes, and single-cell -omics, allow for the observation of individuals within populations. Simultaneously, individual-based models (or more generally agent-based models) allow for individual microbes to be simulated. Bridging these techniques forms the foundation of individual-based ecology of microbes (µIBE). µIBE has elucidated genetic and phenotypic heterogeneity that has important consequences for a number of human interests, including antibiotic or biocide resistance, the productivity and stability of industrial fermentations, the efficacy of food preservatives, and the potential of pathogens to cause disease. Individual-based models can help us to understand how these sets of traits of individual microbes influence the above. This eBook compiles all publications from a recent Research Topic in Frontiers in Microbiology. It features recent research where individual observational and/or modelling techniques are applied to gain unique insights into the ecology of microorganisms. The Research Topic “The Individual Microbe: Single-Cell Analysis and Agent-Based Modelling” arose from the 2016 @ASM conference of the same name hosted by the American Society for Microbiology at its headquarters in Washington, D.C. We are grateful to ASM for funding and hosting this conference.

Modeling of Microscale Transport in Biological Processes

Author : Sid M. Becker
Publisher : Academic Press
ISBN 13 : 9780128045954
Total Pages : 0 pages
Book Rating : 4.0/5 (459 download)

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Book Synopsis Modeling of Microscale Transport in Biological Processes by : Sid M. Becker

Download or read book Modeling of Microscale Transport in Biological Processes written by Sid M. Becker and published by Academic Press. This book was released on 2017-01-12 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Modeling of Microscale Transport in Biological Processes provides a compendium of recent advances in theoretical and computational modeling of biotransport phenomena at the microscale. The simulation strategies presented range from molecular to continuum models and consider both numerical and exact solution method approaches to coupled systems of equations. The biological processes covered in this book include digestion, molecular transport, microbial swimming, cilia mediated flow, microscale heat transfer, micro-vascular flow, vesicle dynamics, transport through bio-films and bio-membranes, and microscale growth dynamics. The book is written for an advanced academic research audience in the fields of engineering (encompassing biomedical, chemical, biological, mechanical, and electrical), biology and mathematics. Although written for, and by, expert researchers, each chapter provides a strong introductory section to ensure accessibility to readers at all levels.

Pathogenic Escherichia Coli

Author : Stefano Morabito
Publisher : Caister Academic Press Limited
ISBN 13 : 9781908230379
Total Pages : 0 pages
Book Rating : 4.2/5 (33 download)

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Book Synopsis Pathogenic Escherichia Coli by : Stefano Morabito

Download or read book Pathogenic Escherichia Coli written by Stefano Morabito and published by Caister Academic Press Limited. This book was released on 2014 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: In recent years, a great deal of knowledge has accumulated on the features associated with the virulence of pathogenic E. coli. A large number of virulence genes have been identified and their products characterized. Great strides have been made in the understanding of the pathogenic mechanisms and the bacterium-host interaction. However, much remains elusive in the understanding of pathogenicity at a cellular and sub-cellular level. This is largely due to E. coli genome's plasticity: it generates great variability and facilitates the rapid emergence of new pathogenic variants. Elucidating the mechanisms underlying the evolution of these pathogens and their interactions with the host are key stages for disease prevention. This book reviews the most important recent findings of the studies on pathogenic E. coli, providing a timely overview of the field. The topics covered include: epidemiology of the disease in humans and animals and the biological mechanisms that shaped the pathogenic types of E. coli * shiga toxins * subtilase cytotoxin * cell cycle modulating toxins * the heat stable and heat labile enterotoxins * haemolysins * structural, molecular, and functional characteristics of A/E lesions * colonization factor antigens of ETEC * enteroaggregative adhesion * host cell invasion * the development of vaccinal strategies to confront the burden of disease. The chapters are written from a molecular and cellular biology standpoint, but also include discussions of the findings with a wider perspective, including considerations of public health and the impact on animal productions. The book will be essential reading for everyone working on these and related pathogens.