SH Domains

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Author :
Publisher : Springer
ISBN 13 : 3319200984
Total Pages : 252 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis SH Domains by : Natalya Kurochkina

Download or read book SH Domains written by Natalya Kurochkina and published by Springer. This book was released on 2015-07-17 with total page 252 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book covers structure, function, and important roles of the SH domains, structure-function relationships, the versatile nature of their action, mechanisms of aggregation, specificity of interactions, impact of mutations on protein functional dysregulation, and cell signaling. Their involvement in various cellular processes such as migration, invasiveness, actin reorganization, shaping spines, determination of the morphology assembly of fibrils, and mechanotransduction makes these molecules attractive drug targets. Substrates, inhibitors and activators of PTKs present a wide variety of therapeutic agents in the context of delivering treatments for numerous pathologies. The new emerging field of stem cell therapies and design of biomaterials for treatments relies on the directed regulation of stem cell growth, differentiation and morphology, as well as the production of biomimetic scaffolds that respond to programmed signals. Advances in deciphering the mechanisms of action of these important molecules will lead to the implementation and success of their vital applications.

SH2 Domains

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Author :
Publisher : Humana
ISBN 13 : 9781493982950
Total Pages : 558 pages
Book Rating : 4.9/5 (829 download)

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Book Synopsis SH2 Domains by : Kazuya Machida

Download or read book SH2 Domains written by Kazuya Machida and published by Humana. This book was released on 2018-06-09 with total page 558 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume covers an array of techniques available for studying SH2 domains and phosphotyrosine signaling. The book is divided into six parts: Part I outlines the history of SH2, technology development, and cell signaling; Part II focuses on computational approaches and tools used for identification, classification, and predictions of SH2 domain binding partners; Part III details various ways to prepare the SH2 domains as experimental reagents; Part IV presents methods for structural analysis and conventional binding assays using SH2 domains; Part V describes high-throughput and proteomics approaches to aid in analyzing SH2-mediated interactions; and Part VI covers applications for SH2 domain to functional and imaging analyzes. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and thorough, SH2 Domains: Methods and Protocols is a valuable resource for computational biologists, biochemists, structural biologists, cell biologists, pathologists, and people interested in SH2 domains and phosphotyrosine signaling. Researchers who are investigating how protein interaction domain mediate specificity in signaling systems may also find this book informative.

SH2 Domains

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Author :
Publisher : Springer Nature
ISBN 13 : 1071633937
Total Pages : 375 pages
Book Rating : 4.0/5 (716 download)

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Book Synopsis SH2 Domains by : Teresa Carlomagno

Download or read book SH2 Domains written by Teresa Carlomagno and published by Springer Nature. This book was released on 2023-09-05 with total page 375 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume looks at the latest methods used to study and modulate the biological function and mechanisms of SH2 domains. The chapters in this book are organized into five parts. Part One presents methodology aimed at determining the structures and dynamics of SH2 domains and their complexes with phosphopeptides. Part Two discusses techniques to understand and predict interactions of SH2 domains by measuring or calculating their affinity to phosphopeptides. Part Three focuses on inhibitors of SH2 domains that lead the way for chemical tool development and drug discovery. Part Four describes how to evolve and engineer SH2 domains with specific binding properties, and Part Five explores how to measure the regulation of protein tyrosine phosphatase activity through allosteric binding of peptides to SH2 domains and condensation. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Cutting-edge and comprehensive, SH2 Domains: Functional Modules and Evolving Tools in Biology is a valuable resource for researchers, working in the biophysical and biochemical field, who want to learn more about this exciting and versatile class of regulatory and signaling domains.

Signaling Mechanisms Regulating T Cell Diversity and Function

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Author :
Publisher : CRC Press
ISBN 13 : 149870509X
Total Pages : 258 pages
Book Rating : 4.4/5 (987 download)

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Book Synopsis Signaling Mechanisms Regulating T Cell Diversity and Function by : Jonathan Soboloff

Download or read book Signaling Mechanisms Regulating T Cell Diversity and Function written by Jonathan Soboloff and published by CRC Press. This book was released on 2017-03-27 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt: T cells play a vital role mediating adaptive immunity, a specific acquired resistance to an infectious agent produced by the introduction of an antigen. There are a variety of T cell types with different functions. They are called T cells, because they are derived from the thymus gland. This volume discusses how T cells are regulated through the operation of signaling mechanisms. Topics covered include positive and negative selection, early events in T cell receptor engagement, and various T cell subsets.

Modular Protein Domains

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Publisher : John Wiley & Sons
ISBN 13 : 3527605894
Total Pages : 524 pages
Book Rating : 4.5/5 (276 download)

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Book Synopsis Modular Protein Domains by : Giovanni Cesareni

Download or read book Modular Protein Domains written by Giovanni Cesareni and published by John Wiley & Sons. This book was released on 2006-03-06 with total page 524 pages. Available in PDF, EPUB and Kindle. Book excerpt: Since the full functionality of any given protein can only be understood in terms of its interaction with other, often regulatory proteins, this unique reference source covers all relevant protein domains, including SH2, SH3, PDZ, WW, PTB, EH, PH and PX. Its user-oriented concept combines broad coverage with easy retrieval of essential information, and includes a special section on Web-based tools and databases covering protein modules and functional peptide motifs. Essential for the study of protein-protein interactions in vivo or in silico, and a prerequisite for successful functional proteomics studies. With a prologue by Sir Tom Blundell.

Signaling by Receptor Tyrosine Kinases

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Author :
Publisher :
ISBN 13 : 9781936113330
Total Pages : 0 pages
Book Rating : 4.1/5 (133 download)

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Book Synopsis Signaling by Receptor Tyrosine Kinases by : Joseph Schlessinger

Download or read book Signaling by Receptor Tyrosine Kinases written by Joseph Schlessinger and published by . This book was released on 2014 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Receptor tyrosine kinases are cell-surface receptors that respond to numerous hormones and growth factors, including insulin, insulin-like growth factors, epidermal growth factor, and nerve growth factor. They activate highly conserved intracellular signaling pathways that regulate cell proliferation, differentiation, and metabolism, playing essential roles in developing and adult animals. This book examines the nature of these receptors and their ligands, the molecular mechanisms that they regulate within cells, and the roles of the receptors in normal physiology and control of embryogenesis. It also discusses how dysfunction of these mechanisms can contribute to cancer and other diseases.

Biocalorimetry 2

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Publisher : John Wiley & Sons
ISBN 13 : 0470011114
Total Pages : 276 pages
Book Rating : 4.4/5 (7 download)

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Book Synopsis Biocalorimetry 2 by : John E. Ladbury

Download or read book Biocalorimetry 2 written by John E. Ladbury and published by John Wiley & Sons. This book was released on 2005-07-15 with total page 276 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over the last decade, high-sensitivity calorimetry has developed from a specialist method used mainly by dedicated experts to a major, commercially available tool in the arsenal directed at understanding molecular interactions and stability. Calorimeters have now become commonplace in bioscience laboratories. As a result, the number of those proficient in experimentation in this field has risen dramatically, as has the range of experiments to which these methods have been applied. Applications extend from studies in small molecule and solvent biophysics, through drug screening to whole cell assays. The technology has developed to include higher levels of sensitivity (and hence smaller sample size requirements) and a drive towards high-throughput technology, creating a very large user base in both academia and the pharmaceutical industry. This book is a fully revised and updated edition of the successful Biocalorimetry: Applications of Calorimetry in the Biological Sciences, published in 1998. Since then, there have been many advances in the instrumentation as well as in its applications and methodology. There are general chapters highlighting the usage of the isothermal titration calorimeter and the differential scanning calorimeter, more advanced chapters on specific applications and tutorials that cover the idiosyncrasies of experimental methods and data analysis. The book draws these together to create the definitive biological calorimetric text book. This book both explains the background to the method and describes novel, high-impact applications. It features works of interest to the experienced calorimetrist and the enthusiastic dilettante. The book should be of interest to all working in the field of biocalorimetry, from graduate students to researchers in academia and in industry.

Protein Modules and Protein-Protein Interactions

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Author :
Publisher : Elsevier
ISBN 13 : 0080493750
Total Pages : 343 pages
Book Rating : 4.0/5 (84 download)

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Book Synopsis Protein Modules and Protein-Protein Interactions by :

Download or read book Protein Modules and Protein-Protein Interactions written by and published by Elsevier. This book was released on 2002-11-24 with total page 343 pages. Available in PDF, EPUB and Kindle. Book excerpt: Protein modules engage in a multitude of interactions with one another and with other cellular components, notably with DNA. These interactions are a central aspect of protein function of great relevance in the post-genomic era. This volume describes a panel of approaches for analyzing protein modules and their interactions, ranging from bioinformatics to physical chemistry, to biochemistry, with an emphasis on the structure-function relationship in protein-protein complexes involved in cellular processes including signal transduction. - Comprehensive overview of different facets of macromolecule interactions - Computational and bioinformatics aspects of analyzing protein modules and their interactions - Emphasis on structure-function relationship in protein-protein complexes involved in cellular processes

Jak-Stat Signaling : From Basics to Disease

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Author :
Publisher : Springer Science & Business Media
ISBN 13 : 3709108918
Total Pages : 451 pages
Book Rating : 4.7/5 (91 download)

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Book Synopsis Jak-Stat Signaling : From Basics to Disease by : Thomas Decker

Download or read book Jak-Stat Signaling : From Basics to Disease written by Thomas Decker and published by Springer Science & Business Media. This book was released on 2012-06-06 with total page 451 pages. Available in PDF, EPUB and Kindle. Book excerpt: JAK tyrosine kinases and STAT transcription factors constitute a signaling pathway, which is activated by cytokines. By activating gene transcription it regulates essential biological responses to environmental cues. The Jak-Stat pathway is involved in the regulation of cell development, differentiation, proliferation and apoptosis. Improper function may contribute to hematopoietic malignancies and cancer. This book provides comprehensive insights into the latest basic and clinical developments in the field. The first part reviews recent findings and new technologies pertaining to basics of Jak-Stat function. The second part describes the evolution of Jak-Stat signaling and the role of the pathway in invertebrate organisms. The third part focuses on Jak-Stat signaling in hematopoietic cells under both physiological and pathophysiological conditions. Finally, chapters in the fourth section describe the relationship of Jak-Stat signaling to various states of disease, particularly infection, leukemias and solid cancers. The book is intended for all scientists in molecular biology, biochemistry and cell biology dealing with biomedical issues.

Peptides for the New Millennium

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Publisher : Springer Science & Business Media
ISBN 13 : 0306468816
Total Pages : 860 pages
Book Rating : 4.3/5 (64 download)

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Book Synopsis Peptides for the New Millennium by : Gregg B. Fields

Download or read book Peptides for the New Millennium written by Gregg B. Fields and published by Springer Science & Business Media. This book was released on 2006-05-17 with total page 860 pages. Available in PDF, EPUB and Kindle. Book excerpt: “Have you tried peptides? Small proteins, the best in the land! Won’t you try peptides? Keep all your body processes in hand! For labor and lactation oxytocin you must buy! Enkephalin always gives a good runner’s high! So won’t you try peptides? Small proteins, the best in the land!” The above words [1], penned by Gary Gisselman to open Peptide Ångst: La Triviata, the opera which made its world premiere on July 1, 1999, also serve as a fitting charge to the th 16 American Peptide Symposium. This latest edition of a premier biennial series was held under the auspices of the American Peptide Society, June 26–July 1, 1999, at the Minneapolis Convention Center, Minneapolis,Minnesota, with the undersigned serving as Co-Chairs. The fortunate coincidence of the calendar allowed us to set as the theme “Peptides for the New Millennium”, and in our judgment, the approximately 1200 participants [2] who converged in the Twin Cities from academic and industrial institutions in 36 countries were treated to an exciting and stimulating conference that left most everyone with an enthusiastic vision for the future of our field. The present Proceedings volume should serve as a handy reference source and succinct snapshot of peptide science at essentially its century mark – the clock having started with the initial contributions of Emil Fischer and Th. Curtius.

Advances in Amino Acid Mimetics and Peptidomimetics

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Publisher : Elsevier
ISBN 13 : 0080552625
Total Pages : 321 pages
Book Rating : 4.0/5 (85 download)

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Book Synopsis Advances in Amino Acid Mimetics and Peptidomimetics by : A. Abell

Download or read book Advances in Amino Acid Mimetics and Peptidomimetics written by A. Abell and published by Elsevier. This book was released on 1997-11-19 with total page 321 pages. Available in PDF, EPUB and Kindle. Book excerpt: Peptidomimetics are compounds which mimic the biological activity of peptides while offering the advantages of increased bioavailability, biostability, bioefficiency, and bioselectivity against the natural biological target of the parent peptide. Examples of peptidomimetics have been isolated as natural products, synthesized as libraries from novel subunits, and designed on the basis of X-ray crystallographic studies and through an intricate knowledge of the biological mode of action of natural peptides. They offer challenging synthetic targets and are increasingly important medicinal agents and biological probes. As a consequence, peptidomimetics embrace much of what is modern medicinal and organic chemistry. This volume highlights some recent and exciting developments in the area.

Bioorganic Chemistry of Biological Signal Transduction

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Publisher : Springer
ISBN 13 : 3540450351
Total Pages : 235 pages
Book Rating : 4.5/5 (44 download)

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Book Synopsis Bioorganic Chemistry of Biological Signal Transduction by : Herbert Waldmann

Download or read book Bioorganic Chemistry of Biological Signal Transduction written by Herbert Waldmann and published by Springer. This book was released on 2003-07-01 with total page 235 pages. Available in PDF, EPUB and Kindle. Book excerpt: The transduction of signals from the extracellular space across the plasma membrane into the interior of cells and ultimately to the nucleus, where in - sponse to such external signals the transcription of the genetic code is inf- enced, belongs to the most fundamental and important events in the regulation of the life cycle of cells. During recent years several signal transduction cascades have been elucidated which regulate, for instance, the growth and the prolife- tion of organisms as diverse as mammals, flies, worms and yeast. The general picture which emerged from these investigations is that nature employs a c- bination of non-covalent ligand/protein and protein/protein interactions together with a set of covalent protein modifications to generate the signals and transduce them to their destinations. The ligands which are recognized may be low molecular weight compounds like lipids, inositol derivatives, steroids or microbial products like cyclosporin. They may be proteins like, for instance, growth factors or intracellular adaptor proteins which carry SH2 or SH3 domains, and they may be specific DNA stretches which are selectively rec- nized by transcription factors. These and other aspects of biological signal transduction provide an open and rewarding field for investigations by scientists from various different dis- plines of biology, medical research and chemistry working in academic research institutions or in industry.

Tumor Biology

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Publisher : Springer Science & Business Media
ISBN 13 : 364261180X
Total Pages : 331 pages
Book Rating : 4.6/5 (426 download)

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Book Synopsis Tumor Biology by : Asterios S. Tsiftsoglou

Download or read book Tumor Biology written by Asterios S. Tsiftsoglou and published by Springer Science & Business Media. This book was released on 2013-06-29 with total page 331 pages. Available in PDF, EPUB and Kindle. Book excerpt: With the aim of providing an international forum for the communication of both the basic and clinical aspects of molecular and cellular biology of cancer, a NATO ASl was held in Porto Carras, Halkidiki, Greece, September 1-12, 1995. The principles as well as recent developments in tumor biology were discussed in depth, with emphasis on the regulation of the cell cycle, differentiation, programmed cell death (apoptosis) and genetics of cancer. This book constitutes the proceedings of that meeting. Specifically, the following areas were addressed: (a) enzymes and proteins (cyclins) that control the cell cycle, as well as the role of m as gene in meiosis and transformation; (b) the structural basis for specificity in protein-tyrosine kinase reactions; (c) the differentiation of normal as well as neoplastic cells with respect to molecular mechanism(s) by which chemical agents or growth factors trigger maturation; (d) phenotypic and genetic aspects of apoptosis; (e) the role of growth factors, like IGF-l, FGF, TN, IL-6, etc. , in cell cycle regulation, apoptosis (cell death) and senescence; (f) molecular mechanisms of transcriptional activation of globin genes and stability of mRNAs related to growth proteins and iron metabolism; (g) the cellular and molecular biology of bone marrow hemopoiesis; and (h) neurotrophic factors and the generation of cellular diversity in the central nervous system. It was obvious from the studies presented that neoplastic cell growth, differentiation and apoptosis in many cell types are regulated at several levels.

Weak Interactions in Molecular Machinery

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Publisher : Frontiers Media SA
ISBN 13 : 2889457877
Total Pages : 105 pages
Book Rating : 4.8/5 (894 download)

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Book Synopsis Weak Interactions in Molecular Machinery by : Irene Díaz-Moreno

Download or read book Weak Interactions in Molecular Machinery written by Irene Díaz-Moreno and published by Frontiers Media SA. This book was released on 2019-03-20 with total page 105 pages. Available in PDF, EPUB and Kindle. Book excerpt: Diverse cellular processes depend on weak interactions between biological components. In this volume, we bring together a wealth of recent information on this topic, combining original research articles with up-to-date reviews, organized under four separate themes. In our first section on nucleic acid regulation, we include a study of the PII-NAGK-PipX-NtcA regulatory axis of cyanobacteria and discover much about the role of RNA binding protein regulation and cross-talk in the control of AU-rich mRNA. Peptide-mediated weak interactions are our second theme in which we review weak molecular interactions in clathrin-mediated endocytosis, investigate the selectivity of the G7-18NATE inhibitor peptide for the Grb7-SH2 domain target and present new structure and interactions of the TPR domain of Sgt2 with yeast chaperones and Ybr137wp. Our third part focuses on carbohydrates and includes a thorough review of how to use NMR to study transient carbohydrate - protein binding and a structural and functional study of lysostaphin - substrate interaction. In our final section, we look at functional sensors driving weak interactions by presenting the molecular basis of the dual regulation of bacterial iron sulfur cluster biogenesis by CyaY and IscX alongside a review of intramolecular fuzzy interactions involving intrinsically disordered domains. Taken together, our eBook chapters offer some recent insight into this area of scientific understanding which is still expanding exponentially.

Structure and Function in Cell Signalling

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Publisher : John Wiley & Sons
ISBN 13 : 0470723734
Total Pages : 416 pages
Book Rating : 4.4/5 (77 download)

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Book Synopsis Structure and Function in Cell Signalling by : John Nelson

Download or read book Structure and Function in Cell Signalling written by John Nelson and published by John Wiley & Sons. This book was released on 2008-08-06 with total page 416 pages. Available in PDF, EPUB and Kindle. Book excerpt: "This book contains extremely detailed and informative content on structure and function of ligands, receptors, and signalling intermediates plus interactions ... the extent of detail and appropriate referencing is impressive." –Microbiology Today, July 2009 "A very well-written book suitable for use as a reference or textbook for an undergraduate subject in cell signalling. For researchers interested in the molecular basis of cell signalling and how aberrant regulation of cell signalling proteins causes diseases, this is an excellent resource of biochemical and structural information." –Australian Biochemist, August 2009 "From basics to details, this is an elegantly written and carefully edited book. The chapters on cell cycle control and oncogenesis are particularly fascinating and valuable to biomedical research. This is the book to have if you are interested in molecular mechanisms of signal transduction. It is a great introduction to the literature that will be welcomed by students and experts alike." –Doody's, January 2009 This text is a concise and accessible introduction to the dynamic but complex field of signal transduction. Rather than simply cataloguing all signalling molecules and delineating every known pathway, this book aims to break signalling down into common elements and activities – the ‘nuts and bolts’ of cellular information exchange. With an emphasis on clarity of presentation throughout, the book teaches the basic principles focusing on a mature core of knowledge, providing students with a foundation of learning in this complex and potentially confusing subject. It also addresses the issue of variation in the numbering of key amino acids as well as featuring interaction with RasMol software, and exercises to aid understanding. An accessible introduction to the complex field of cell signalling Interacts with RasMol software – freely downloadable for viewing structures in 3D Includes exercises and clear instructions in the use of RasMol Well illustrated in full colour throughout Structure and Function in Cell Signalling is an invaluable resource to students across a range of life science degree programmes including biochemistry, cell and molecular biology, physiology, biomedicine and oncology. This book provides a clear, accessible introduction to this rapidly expanding field.

Biomedical Chemistry

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Publisher : John Wiley & Sons
ISBN 13 : 9780471326335
Total Pages : 438 pages
Book Rating : 4.3/5 (263 download)

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Book Synopsis Biomedical Chemistry by : Paul F. Torrence

Download or read book Biomedical Chemistry written by Paul F. Torrence and published by John Wiley & Sons. This book was released on 2000-01-24 with total page 438 pages. Available in PDF, EPUB and Kindle. Book excerpt: How basic chemical ideas help advance the understanding and treatment of disease Biomedical Chemistry presents clear, concise coverage of the application of chemistry to drug discovery and determination of disease etiology, highlighting its role in the explosive growth of biotechnology and molecular biology. Through expert contributions from leading researchers in diverse fields, the book provides readers with an understanding of how fundamental chemical concepts are used in the development of novel approaches to the major problems in medicine today. The authors explain both the science and reasoning underlying each experimental approach, exploring cutting-edge developments in AIDS, cancer, alcoholism, Parkinson's disease, trypanosomiasis, emphysema, and malaria. Contemporary research problems discussed include: * Mechanism-based drug discovery * Design of new antitumor and antiviral agents * Targeting tumors using magnetic drug delivery * Antisense and antigene agents Easily accessible to anyone with a solid undergraduate background in chemistry, Biomedical Chemistry is an excellent resource for researchers in health-related fields as well as anyone seeking an overview of frontier topics in medicinal chemistry, organic chemistry, and biochemistry.

Cell Biology E-Book

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Publisher : Elsevier Health Sciences
ISBN 13 : 0323400027
Total Pages : 900 pages
Book Rating : 4.3/5 (234 download)

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Book Synopsis Cell Biology E-Book by : Thomas D. Pollard

Download or read book Cell Biology E-Book written by Thomas D. Pollard and published by Elsevier Health Sciences. This book was released on 2016-11-01 with total page 900 pages. Available in PDF, EPUB and Kindle. Book excerpt: The much-anticipated 3rd edition of Cell Biology delivers comprehensive, clearly written, and richly illustrated content to today's students, all in a user-friendly format. Relevant to both research and clinical practice, this rich resource covers key principles of cellular function and uses them to explain how molecular defects lead to cellular dysfunction and cause human disease. Concise text and visually amazing graphics simplify complex information and help readers make the most of their study time. - Clearly written format incorporates rich illustrations, diagrams, and charts. - Uses real examples to illustrate key cell biology concepts. - Includes beneficial cell physiology coverage. - Clinically oriented text relates cell biology to pathophysiology and medicine. - Takes a mechanistic approach to molecular processes. - Major new didactic chapter flow leads with the latest on genome organization, gene expression and RNA processing. - Boasts exciting new content including the evolutionary origin of eukaryotes, super resolution fluorescence microscopy, cryo-electron microscopy, gene editing by CRISPR/Cas9, contributions of high throughput DNA sequencing to understand genome organization and gene expression, microRNAs, IncRNAs, membrane-shaping proteins, organelle-organelle contact sites, microbiota, autophagy, ERAD, motor protein mechanisms, stem cells, and cell cycle regulation. - Features specially expanded coverage of genome sequencing and regulation, endocytosis, cancer genomics, the cytoskeleton, DNA damage response, necroptosis, and RNA processing. - Includes hundreds of new and updated diagrams and micrographs,plus fifty new protein and RNA structures to explain molecular mechanisms in unprecedented detail. - Student Consult eBook version included with purchase. This enhanced eBook experience allows you to search all of the text, figures, images, and over a dozen animations from the book on a variety of devices.