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Author : Tanya Sienko
Publisher : MIT Press (MA)
ISBN 13 : 9780262283632
Total Pages : 257 pages
Book Rating : 4.2/5 (836 download)
Download or read book Molecular Computing written by Tanya Sienko and published by MIT Press (MA). This book was released on 2003 with total page 257 pages. Available in PDF, EPUB and Kindle. Book excerpt: An introduction to the principles and design of molecular computers.
Author : Nicholas G. Rambidi
Publisher : Springer
ISBN 13 : 3211996990
Total Pages : 228 pages
Book Rating : 4.2/5 (119 download)
Download or read book Molecular Computing written by Nicholas G. Rambidi and published by Springer. This book was released on 2014-10-09 with total page 228 pages. Available in PDF, EPUB and Kindle. Book excerpt: The question whether molecular primitives can prove to be real alternatives to contemporary semiconductor means or effective supplements extending greatly possibilities of information technologies is addressed. Molecular primitives and circuitry for information processing devices are also discussed. Investigations in molecular based computing devices were initiated in the early 1970s in the hopes for an increase in the integration level and processing speed. Real progress proved unfeasible into the 1980 ́s. However, recently, important and promising results were achieved. The elaboration of operational 160-kilobit molecular electronic memory patterned 1011 bits per square centimeter in the end of 90 ́s were the first timid steps of information processing further development. Subsequent advances beyond these developments are presented and discussed. This work provides useful knowledge to anyone working in molecular based information processing.
Author : Thomas J. Head
Publisher : Springer Science & Business Media
ISBN 13 : 3540207813
Total Pages : 401 pages
Book Rating : 4.5/5 (42 download)
Download or read book Aspects of Molecular Computing written by Thomas J. Head and published by Springer Science & Business Media. This book was released on 2004-02-20 with total page 401 pages. Available in PDF, EPUB and Kindle. Book excerpt: Molecular computing is a rapidly growing subarea of natural computing. On the one hand, molecular computing is concerned with the use of bio-molecules for the purpose of actual computations while, on the other hand, it attempts to understand the computational nature of molecular processes going on in living cells. The book presents a unique and authorative state-of-the-art survey on current research in molecular computing: 30 papers by leading researchers in the area are drawn together on the occasion of the 70th birthday of Tom Head, a pioneer in molecular computing. Among the topics addressed are molecular tiling, DNA self-assembly, splicing systems, DNA-based cryptography, DNA word design, gene assembly, and membrane computing.
Author : Chris Thachuk
Publisher : Springer
ISBN 13 : 3030268071
Total Pages : 247 pages
Book Rating : 4.0/5 (32 download)
Download or read book DNA Computing and Molecular Programming written by Chris Thachuk and published by Springer. This book was released on 2019-07-30 with total page 247 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 25th International Conference on DNA Computing and Molecular Programming, DNA 25, held in Seattle, WA, USA, in August 2019. The 12 full papers presented were carefully selected from 19 submissions. The papers cover a wide range of topics relating to biomolecular computing such as algorithms and models for computation on biomolecular systems; computational processes in vitro and in vivo; molecular switches, gates, devices, and circuits; molecular folding and self-assembly of nanostructures; analysis and theoretical models of laboratory techniques; molecular motors and molecular robotics; information storage; studies of fault-tolerance and error correction; software tools for analysis, simulation, anddesign; synthetic biology and in vitro evolution; and applications in engineering, physics, chemistry, biology, and medicine.
Author : Gheorghe Paun
Publisher : Springer Science & Business Media
ISBN 13 : 3662035634
Total Pages : 404 pages
Book Rating : 4.6/5 (62 download)
Download or read book DNA Computing written by Gheorghe Paun and published by Springer Science & Business Media. This book was released on 2013-03-09 with total page 404 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the first book on DNA computing, a molecular approach that may revolutionize computing-replacing silicon with carbon and microchips with DNA molecules. The book starts with an introduction to DNA computing, exploring the power of complementarity, the basics of biochemistry, and language and computation theory. It then brings the reader to the most advanced theories develop thus far in this emerging research area.
Author : Xiangxiang Zeng
Publisher : MDPI
ISBN 13 : 3039211951
Total Pages : 390 pages
Book Rating : 4.0/5 (392 download)
Download or read book Molecular Computing and Bioinformatics written by Xiangxiang Zeng and published by MDPI. This book was released on 2019-07-11 with total page 390 pages. Available in PDF, EPUB and Kindle. Book excerpt: This text will provide the most recent knowledge and advances in the area of molecular computing and bioinformatics. Molecular computing and bioinformatics have a close relationship, paying attention to the same object but working towards different orientations. The articles will range from topics such as DNA computing and membrane computing to specific biomedical applications, including drug R&D and disease analysis.
Author : Yannick Rondelez
Publisher : Springer
ISBN 13 : 3319439944
Total Pages : 204 pages
Book Rating : 4.3/5 (194 download)
Download or read book DNA Computing and Molecular Programming written by Yannick Rondelez and published by Springer. This book was released on 2016-08-16 with total page 204 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 22nd International Conference on DNA Computing and Molecular Programming, DNA 22, held Munich, Germany, in September 16 The 11 full papers presented together with 10 invited and tutorial talks were carefully selected from 55 submissions Research in DNA computing and molecular programming draws together mathematics, computer science, physics, chemistry, biology, and nanotechnology to address the analysis, design, and synthesis of information-based molecular systems
Author : Robert Brijder
Publisher : Springer
ISBN 13 : 3319667998
Total Pages : 278 pages
Book Rating : 4.3/5 (196 download)
Download or read book DNA Computing and Molecular Programming written by Robert Brijder and published by Springer. This book was released on 2017-08-22 with total page 278 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 23th International Conference on DNA Computing and Molecular Programming, DNA 23, held Austin, TX, USA, in September 2017. The 16 full papers presented were carefully selected from 23 submissions. Research in DNA computing aims to draw together mathematics, computerscience, physics, chemistry, biology, and nanotechnology to address the analysis, design, and synthesis of information-based molecular systems. The papers address all areas related to biomolecular computing such as: algorithms and models for computation with biomolecular systems; computational processes in vitro and in vivo; molecular motors and molecular robotics; studies of fault-tolerance and error correction; software tools for analysis, simulation, and design; synthetic biology and in vitro evolution; applications in engineering, physics, chemistry, biology, and medicine.
Author : Daan Frenkel
Publisher : Elsevier
ISBN 13 : 0080519989
Total Pages : 661 pages
Book Rating : 4.0/5 (85 download)
Download or read book Understanding Molecular Simulation written by Daan Frenkel and published by Elsevier. This book was released on 2001-10-19 with total page 661 pages. Available in PDF, EPUB and Kindle. Book excerpt: Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the "recipes" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique for a given application. A wide variety of tools exist, so the choice of technique requires a good understanding of the basic principles. More importantly, such understanding may greatly improve the efficiency of a simulation program. The implementation of simulation methods is illustrated in pseudocodes and their practical use in the case studies used in the text. Since the first edition only five years ago, the simulation world has changed significantly -- current techniques have matured and new ones have appeared. This new edition deals with these new developments; in particular, there are sections on: - Transition path sampling and diffusive barrier crossing to simulaterare events - Dissipative particle dynamic as a course-grained simulation technique - Novel schemes to compute the long-ranged forces - Hamiltonian and non-Hamiltonian dynamics in the context constant-temperature and constant-pressure molecular dynamics simulations - Multiple-time step algorithms as an alternative for constraints - Defects in solids - The pruned-enriched Rosenbluth sampling, recoil-growth, and concerted rotations for complex molecules - Parallel tempering for glassy Hamiltonians Examples are included that highlight current applications and the codes of case studies are available on the World Wide Web. Several new examples have been added since the first edition to illustrate recent applications. Questions are included in this new edition. No prior knowledge of computer simulation is assumed.
Author : Sandeep Kumar Shukla
Publisher : Springer Science & Business Media
ISBN 13 : 1402080670
Total Pages : 364 pages
Book Rating : 4.4/5 (2 download)
Download or read book Nano, Quantum and Molecular Computing written by Sandeep Kumar Shukla and published by Springer Science & Business Media. This book was released on 2004-06-30 with total page 364 pages. Available in PDF, EPUB and Kindle. Book excerpt: One of the grand challenges in the nano-scopic computing era is guarantees of robustness. Robust computing system design is confronted with quantum physical, probabilistic, and even biological phenomena, and guaranteeing high reliability is much more difficult than ever before. Scaling devices down to the level of single electron operation will bring forth new challenges due to probabilistic effects and uncertainty in guaranteeing 'zero-one' based computing. Minuscule devices imply billions of devices on a single chip, which may help mitigate the challenge of uncertainty by replication and redundancy. However, such device densities will create a design and validation nightmare with the shear scale. The questions that confront computer engineers regarding the current status of nanocomputing material and the reliability of systems built from such miniscule devices, are difficult to articulate and answer. We have found a lack of resources in the confines of a single volume that at least partially attempts to answer these questions. We believe that this volume contains a large amount of research material as well as new ideas that will be very useful for some one starting research in the arena of nanocomputing, not at the device level, but the problems one would face at system level design and validation when nanoscopic physicality will be present at the device level.
Author : Victor Bloomfield
Publisher : Springer Science & Business Media
ISBN 13 : 1441900837
Total Pages : 325 pages
Book Rating : 4.4/5 (419 download)
Download or read book Computer Simulation and Data Analysis in Molecular Biology and Biophysics written by Victor Bloomfield and published by Springer Science & Business Media. This book was released on 2009-06-05 with total page 325 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an introduction to two important aspects of modern bioch- istry, molecular biology, and biophysics: computer simulation and data analysis. My aim is to introduce the tools that will enable students to learn and use some f- damental methods to construct quantitative models of biological mechanisms, both deterministicandwithsomeelementsofrandomness;tolearnhowconceptsofpr- ability can help to understand important features of DNA sequences; and to apply a useful set of statistical methods to analysis of experimental data. The availability of very capable but inexpensive personal computers and software makes it possible to do such work at a much higher level, but in a much easier way, than ever before. TheExecutiveSummaryofthein?uential2003reportfromtheNationalAcademy of Sciences, “BIO 2010: Transforming Undergraduate Education for Future - search Biologists” [12], begins The interplay of the recombinant DNA, instrumentation, and digital revolutions has p- foundly transformed biological research. The con?uence of these three innovations has led to important discoveries, such as the mapping of the human genome. How biologists design, perform, and analyze experiments is changing swiftly. Biological concepts and models are becoming more quantitative, and biological research has become critically dependent on concepts and methods drawn from other scienti?c disciplines. The connections between the biological sciences and the physical sciences, mathematics, and computer science are rapidly becoming deeper and more extensive.
Author : Marian Gheorghe
Publisher : IGI Global
ISBN 13 : 1591403359
Total Pages : 287 pages
Book Rating : 4.5/5 (914 download)
Download or read book Molecular Computation Models written by Marian Gheorghe and published by IGI Global. This book was released on 2005-01-01 with total page 287 pages. Available in PDF, EPUB and Kindle. Book excerpt: With the increasing complexity of software systems and their widespread growth into many aspects of our lives, the need to search for new models, paradigms, and ultimately, technologies, to manage this problem is evident. The way nature solves various problems through processes evolving during billions of years was always an inspiration to many computational paradigms; on the other hand, the complexity of the problems posed by the investigation of biological systems challenged the research of new tractable models. Molecular Computational Models: Unconventional Approaches is looking into new computational paradigms from both a theoretical perspective which offers a solid foundation of the models developed, as well as from a modeling angle, in order to reveal their effectiveness in modeling and simulating, especially biological systems. Tools and programming concepts and implementation issues are also discussed in the context of some experiments and comparative studies.
Author : A Prasanna de Silva
Publisher : Royal Society of Chemistry
ISBN 13 : 1849733023
Total Pages : 417 pages
Book Rating : 4.8/5 (497 download)
Download or read book Molecular Logic-based Computation written by A Prasanna de Silva and published by Royal Society of Chemistry. This book was released on 2012-12-31 with total page 417 pages. Available in PDF, EPUB and Kindle. Book excerpt: We all learn - in schools, factories, bars and streets. We gather, store, process and transmit information in society. Molecular systems involved in our senses and within our brains allow all this to happen and molecular systems allow living things of all kinds to handle information for the purpose of survival and growth. Nevertheless, the vital link between molecules and computation was not generally appreciated until a few decades ago. Semiconductor-based information technology had penetrated society at many levels and the interest in maintaining momentum of this revolution led to the consideration of molecules, among others, as possible information handlers. Such an overlap between the recent engineering-oriented revolution with the ancient biology-oriented success story is very interesting and George Boole's times in Ireland 150 years ago produced the logic ideas that provide the foundations of computation to this day. Molecular logic and computation is a field which is 17 years young, has had a healthy growth and is a story which deserves to be told. It is a growing branch of chemical science which highlights the connection between information technology (engineering and biological) and chemistry. The author and co-workers of this publication launched molecular logic as an experimental field by publishing the first research in the primary literature in 1993 and are uniquely placed to recount how the field has grown. There is no other book at present on molecular logic and computation and is more comprehensive than that found in any review available so far. It shows how designed molecules can play the role of information processors in a wide variety of situations, once we are educated by those information processors already available in the semiconductor electronics business and in the natural world. Following a short history of the field, is a set of primers on logic, computing and photochemical principles which are an essential basis in this field. The book covers all of the Boolean logic gates driven by a single input and all of those with double inputs and the wide range of designs which lie beneath these gates is a particular highlight. The easily-available diversity of chemical systems is another highlight, especially when it leads to reconfigurable logic gates. Further on in the book, molecular arithmetic and other more complex logic operations, including those with a memory and those which stray beyond binary are covered. Then follows molecular computing approaches which lie outside the Boolean blueprint, including quantum phenomena and finally, the book catalogues the useful real-life applications of molecular logic and computation which are already available. This book is an authoritative, state of the art, reference and a 'one-stop-shop' concerning the current state of the field for scientists, academics and postgraduate students.
Author : MacLennan, Bruce
Publisher : IGI Global
ISBN 13 : 1609601882
Total Pages : 392 pages
Book Rating : 4.6/5 (96 download)
Download or read book Theoretical and Technological Advancements in Nanotechnology and Molecular Computation: Interdisciplinary Gains written by MacLennan, Bruce and published by IGI Global. This book was released on 2010-11-30 with total page 392 pages. Available in PDF, EPUB and Kindle. Book excerpt: Theoretical and Technological Advancements in Nanotechnology and Molecular Computation: Interdisciplinary Gains compiles research in areas where nanoscience and computer science meet. This book explores current and future trends that discus areas such as, cellular nanocomputers, DNA self-assembly, and the architectural design of a "nano-brain." The authors of each chapter have provided in-depth insight into the current state of research in nanotechnology and molecular computation as well as identified successful approaches, tools and methodologies in their research.
Author : Nataša Jonoska
Publisher : Springer Science & Business Media
ISBN 13 : 3642401937
Total Pages : 522 pages
Book Rating : 4.6/5 (424 download)
Download or read book Discrete and Topological Models in Molecular Biology written by Nataša Jonoska and published by Springer Science & Business Media. This book was released on 2013-12-23 with total page 522 pages. Available in PDF, EPUB and Kindle. Book excerpt: Theoretical tools and insights from discrete mathematics, theoretical computer science, and topology now play essential roles in our understanding of vital biomolecular processes. The related methods are now employed in various fields of mathematical biology as instruments to "zoom in" on processes at a molecular level. This book contains expository chapters on how contemporary models from discrete mathematics – in domains such as algebra, combinatorics, and graph and knot theories – can provide perspective on biomolecular problems ranging from data analysis, molecular and gene arrangements and structures, and knotted DNA embeddings via spatial graph models to the dynamics and kinetics of molecular interactions. The contributing authors are among the leading scientists in this field and the book is a reference for researchers in mathematics and theoretical computer science who are engaged with modeling molecular and biological phenomena using discrete methods. It may also serve as a guide and supplement for graduate courses in mathematical biology or bioinformatics, introducing nontraditional aspects of mathematical biology.
Author : YASUBUMI SAKAKIBARA
Publisher : Springer Science & Business Media
ISBN 13 : 3642183042
Total Pages : 196 pages
Book Rating : 4.6/5 (421 download)
Download or read book DNA Computing and Molecular Programming written by YASUBUMI SAKAKIBARA and published by Springer Science & Business Media. This book was released on 2011-01-14 with total page 196 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the thoroughly refereed post-conference proceedings of the 16th International Conference on DNA Computing and Molecular Programming, DNA16, held in Hong Kong, China, in June 2010. The 16 revised full papers presented were carefully selected during two rounds of reviewing and improvement from 59 submissions. The papers are well balanced between theoretical and experimental work and address all areas that relate to biomolecular computing, including demonstrations of biomolecular computing, theoretical models of biomolecular computing, biomolecular algorithms, computational processes in vitro and in vivo, analysis and theoretical models of laboratory techniques, biotechnological and other applications of DNA computing, DNA nanostructures, DNA devices such as DNA motors, DNA error evaluation and correction, in vitro evolution, molecular design, self-assembled systems, nucleic acid chemistry, and simulation tools.
Author : A Prasanna de Silva
Publisher : Royal Society of Chemistry
ISBN 13 : 1782626239
Total Pages : 417 pages
Book Rating : 4.7/5 (826 download)
Download or read book Molecular Logic-based Computation written by A Prasanna de Silva and published by Royal Society of Chemistry. This book was released on 2016-01-13 with total page 417 pages. Available in PDF, EPUB and Kindle. Book excerpt: We all learn - in schools, factories, bars and streets. We gather, store, process and transmit information in society. Molecular systems involved in our senses and within our brains allow all this to happen and molecular systems allow living things of all kinds to handle information for the purpose of survival and growth. Nevertheless, the vital link between molecules and computation was not generally appreciated until a few decades ago. Semiconductor-based information technology had penetrated society at many levels and the interest in maintaining momentum of this revolution led to the consideration of molecules, among others, as possible information handlers. Such an overlap between the recent engineering-oriented revolution with the ancient biology-oriented success story is very interesting and George Boole's times in Ireland 150 years ago produced the logic ideas that provide the foundations of computation to this day. Molecular logic and computation is a field which is 17 years young, has had a healthy growth and is a story which deserves to be told. It is a growing branch of chemical science which highlights the connection between information technology (engineering and biological) and chemistry. The author and co-workers of this publication launched molecular logic as an experimental field by publishing the first research in the primary literature in 1993 and are uniquely placed to recount how the field has grown. There is no other book at present on molecular logic and computation and is more comprehensive than that found in any review available so far. It shows how designed molecules can play the role of information processors in a wide variety of situations, once we are educated by those information processors already available in the semiconductor electronics business and in the natural world. Following a short history of the field, is a set of primers on logic, computing and photochemical principles which are an essential basis in this field. The book covers all of the Boolean logic gates driven by a single input and all of those with double inputs and the wide range of designs which lie beneath these gates is a particular highlight. The easily-available diversity of chemical systems is another highlight, especially when it leads to reconfigurable logic gates. Further on in the book, molecular arithmetic and other more complex logic operations, including those with a memory and those which stray beyond binary are covered. Then follows molecular computing approaches which lie outside the Boolean blueprint, including quantum phenomena and finally, the book catalogues the useful real-life applications of molecular logic and computation which are already available. This book is an authoritative, state of the art, reference and a 'one-stop-shop' concerning the current state of the field for scientists, academics and postgraduate students.
