Methods In Neuronal Modeling

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Methods in Neuronal Modeling

Author : Christof Koch
Publisher : MIT Press
ISBN 13 : 9780262112314
Total Pages : 700 pages
Book Rating : 4.1/5 (123 download)

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Book Synopsis Methods in Neuronal Modeling by : Christof Koch

Download or read book Methods in Neuronal Modeling written by Christof Koch and published by MIT Press. This book was released on 1998 with total page 700 pages. Available in PDF, EPUB and Kindle. Book excerpt: Kinetic Models of Synaptic Transmission / Alain Destexhe, Zachary F. Mainen, Terrence J. Sejnowski / - Cable Theory for Dendritic Neurons / Wilfrid Rall, Hagai Agmon-Snir / - Compartmental Models of Complex Neurons / Idan Segev, Robert E. Burke / - Multiple Channels and Calcium Dynamics / Walter M. Yamada, Christof Koch, Paul R. Adams / - Modeling Active Dendritic Processes in Pyramidal Neurons / Zachary F. Mainen, Terrence J. Sejnowski / - Calcium Dynamics in Large Neuronal Models / Erik De Schutter, Paul Smolen / - Analysis of Neural Excitability and Oscillations / John Rinzel, Bard Ermentrout / - Design and Fabrication of Analog VLSI Neurons / Rodney Douglas, Misha Mahowald / - Principles of Spike Train Analysis / Fabrizio Gabbiani, Christof Koch / - Modeling Small Networks / Larry Abbott, Eve Marder / - Spatial and Temporal Processing in Central Auditory Networks / Shihab Shamma / - Simulating Large Networks of Neurons / Alexander D. Protopapas, Michael Vanier, James M. Bower / ...

Methods in Neuronal Modeling

Author : Christof Koch
Publisher : Bradford Book
ISBN 13 : 9780262610711
Total Pages : 524 pages
Book Rating : 4.6/5 (17 download)

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Book Synopsis Methods in Neuronal Modeling by : Christof Koch

Download or read book Methods in Neuronal Modeling written by Christof Koch and published by Bradford Book. This book was released on 1991 with total page 524 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Methods in Neuronal Modeling, second edition

Author : Christof Koch
Publisher : National Geographic Books
ISBN 13 : 0262517132
Total Pages : 0 pages
Book Rating : 4.2/5 (625 download)

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Book Synopsis Methods in Neuronal Modeling, second edition by : Christof Koch

Download or read book Methods in Neuronal Modeling, second edition written by Christof Koch and published by National Geographic Books. This book was released on 2003-01-01 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Much research focuses on the question of how information is processed in nervous systems, from the level of individual ionic channels to large-scale neuronal networks, and from "simple" animals such as sea slugs and flies to cats and primates. New interdisciplinary methodologies combine a bottom-up experimental methodology with the more top-down-driven computational and modeling approach. This book serves as a handbook of computational methods and techniques for modeling the functional properties of single and groups of nerve cells. The contributors highlight several key trends: (1) the tightening link between analytical/numerical models and the associated experimental data, (2) the broadening of modeling methods, at both the subcellular level and the level of large neuronal networks that incorporate real biophysical properties of neurons as well as the statistical properties of spike trains, and (3) the organization of the data gained by physical emulation of the nervous system components through the use of very large scale circuit integration (VLSI) technology. The field of neuroscience has grown dramatically since the first edition of this book was published nine years ago. Half of the chapters of the second edition are completely new; the remaining ones have all been thoroughly revised. Many chapters provide an opportunity for interactive tutorials and simulation programs. They can be accessed via Christof Koch's Website. Contributors Larry F. Abbott, Paul R. Adams, Hagai Agmon-Snir, James M. Bower, Robert E. Burke, Erik de Schutter, Alain Destexhe, Rodney Douglas, Bard Ermentrout, Fabrizio Gabbiani, David Hansel, Michael Hines, Christof Koch, Misha Mahowald, Zachary F. Mainen, Eve Marder, Michael V. Mascagni, Alexander D. Protopapas, Wilfrid Rall, John Rinzel, Idan Segev, Terrence J. Sejnowski, Shihab Shamma, Arthur S. Sherman, Paul Smolen, Haim Sompolinsky, Michael Vanier, Walter M. Yamada

Modeling in the Neurosciences

Author : R.R. Poznanski
Publisher : Routledge
ISBN 13 : 1351430971
Total Pages : 528 pages
Book Rating : 4.3/5 (514 download)

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Book Synopsis Modeling in the Neurosciences by : R.R. Poznanski

Download or read book Modeling in the Neurosciences written by R.R. Poznanski and published by Routledge. This book was released on 2019-01-22 with total page 528 pages. Available in PDF, EPUB and Kindle. Book excerpt: With contributions from more than 40 renowned experts, Modeling in the Neurosciences: From Ionic Channels to Neural Networks is essential for those interested in neuronal modeling and quantitative neiroscience. Focusing on new mathematical and computer models, techniques and methods, this monograph represents a cohesive and comprehensive treatment

Computational Neuroscience

Author : Erik De Schutter
Publisher : CRC Press
ISBN 13 : 9780849320682
Total Pages : 368 pages
Book Rating : 4.3/5 (26 download)

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Book Synopsis Computational Neuroscience by : Erik De Schutter

Download or read book Computational Neuroscience written by Erik De Schutter and published by CRC Press. This book was released on 2000-11-22 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: Designed primarily as an introduction to realistic modeling methods, Computational Neuroscience: Realistic Modeling for Experimentalists focuses on methodological approaches, selecting appropriate methods, and identifying potential pitfalls. The author addresses varying levels of complexity, from molecular interactions within single neurons to the processing of information by neural networks. He avoids theoretical mathematics and provides just enough of the basic math used by experimentalists. What makes this resource unique is the inclusion of a CD-ROM that furnishes interactive modeling examples. It contains tutorials and demos, movies and images, and the simulation scripts necessary to run the full simulation described in the chapter examples. Each chapter covers: the theoretical foundation; parameters needed; appropriate software descriptions; evaluation of the model; future directions expected; examples in text boxes linked to the CD-ROM; and references. The first book to bring you cutting-edge developments in neuronal modeling. It provides an introduction to realistic modeling methods at levels of complexity varying from molecular interactions to neural networks. The book and CD-ROM combine to make Computational Neuroscience: Realistic Modeling for Experimentalists the complete package for understanding modeling techniques.

Modeling in the Neurosciences

Author : G. N. Reeke
Publisher : CRC Press
ISBN 13 : 0203390970
Total Pages : 736 pages
Book Rating : 4.2/5 (33 download)

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Book Synopsis Modeling in the Neurosciences by : G. N. Reeke

Download or read book Modeling in the Neurosciences written by G. N. Reeke and published by CRC Press. This book was released on 2005-03-29 with total page 736 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational models of neural networks have proven insufficient to accurately model brain function, mainly as a result of simplifications that ignore the physical reality of neuronal structure in favor of mathematically tractable algorithms and rules. Even the more biologically based "integrate and fire" and "compartmental" styles of modeling suff

Stochastic Biomathematical Models

Author : Mostafa Bachar
Publisher : Springer
ISBN 13 : 3642321577
Total Pages : 206 pages
Book Rating : 4.6/5 (423 download)

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Book Synopsis Stochastic Biomathematical Models by : Mostafa Bachar

Download or read book Stochastic Biomathematical Models written by Mostafa Bachar and published by Springer. This book was released on 2012-10-19 with total page 206 pages. Available in PDF, EPUB and Kindle. Book excerpt: Stochastic biomathematical models are becoming increasingly important as new light is shed on the role of noise in living systems. In certain biological systems, stochastic effects may even enhance a signal, thus providing a biological motivation for the noise observed in living systems. Recent advances in stochastic analysis and increasing computing power facilitate the analysis of more biophysically realistic models, and this book provides researchers in computational neuroscience and stochastic systems with an overview of recent developments. Key concepts are developed in chapters written by experts in their respective fields. Topics include: one-dimensional homogeneous diffusions and their boundary behavior, large deviation theory and its application in stochastic neurobiological models, a review of mathematical methods for stochastic neuronal integrate-and-fire models, stochastic partial differential equation models in neurobiology, and stochastic modeling of spreading cortical depression.

Single Neuron Computation

Author : Thomas M. McKenna
Publisher : Academic Press
ISBN 13 : 1483296067
Total Pages : 644 pages
Book Rating : 4.4/5 (832 download)

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Book Synopsis Single Neuron Computation by : Thomas M. McKenna

Download or read book Single Neuron Computation written by Thomas M. McKenna and published by Academic Press. This book was released on 2014-05-19 with total page 644 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book contains twenty-two original contributions that provide a comprehensive overview of computational approaches to understanding a single neuron structure. The focus on cellular-level processes is twofold. From a computational neuroscience perspective, a thorough understanding of the information processing performed by single neurons leads to an understanding of circuit- and systems-level activity. From the standpoint of artificial neural networks (ANNs), a single real neuron is as complex an operational unit as an entire ANN, and formalizing the complex computations performed by real neurons is essential to the design of enhanced processor elements for use in the next generation of ANNs. The book covers computation in dendrites and spines, computational aspects of ion channels, synapses, patterned discharge and multistate neurons, and stochastic models of neuron dynamics. It is the most up-to-date presentation of biophysical and computational methods.

Neuronal Dynamics

Author : Wulfram Gerstner
Publisher : Cambridge University Press
ISBN 13 : 113999316X
Total Pages : 591 pages
Book Rating : 4.1/5 (399 download)

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Book Synopsis Neuronal Dynamics by : Wulfram Gerstner

Download or read book Neuronal Dynamics written by Wulfram Gerstner and published by Cambridge University Press. This book was released on 2014-07-24 with total page 591 pages. Available in PDF, EPUB and Kindle. Book excerpt: What happens in our brain when we make a decision? What triggers a neuron to send out a signal? What is the neural code? This textbook for advanced undergraduate and beginning graduate students provides a thorough and up-to-date introduction to the fields of computational and theoretical neuroscience. It covers classical topics, including the Hodgkin–Huxley equations and Hopfield model, as well as modern developments in the field such as generalized linear models and decision theory. Concepts are introduced using clear step-by-step explanations suitable for readers with only a basic knowledge of differential equations and probabilities, and are richly illustrated by figures and worked-out examples. End-of-chapter summaries and classroom-tested exercises make the book ideal for courses or for self-study. The authors also give pointers to the literature and an extensive bibliography, which will prove invaluable to readers interested in further study.

Computational Modeling Methods for Neuroscientists

Author : Erik De Schutter
Publisher : National Geographic Books
ISBN 13 : 0262013274
Total Pages : 0 pages
Book Rating : 4.2/5 (62 download)

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Book Synopsis Computational Modeling Methods for Neuroscientists by : Erik De Schutter

Download or read book Computational Modeling Methods for Neuroscientists written by Erik De Schutter and published by National Geographic Books. This book was released on 2009-09-04 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: A guide to computational modeling methods in neuroscience, covering a range of modeling scales from molecular reactions to large neural networks. This book offers an introduction to current methods in computational modeling in neuroscience. The book describes realistic modeling methods at levels of complexity ranging from molecular interactions to large neural networks. A “how to” book rather than an analytical account, it focuses on the presentation of methodological approaches, including the selection of the appropriate method and its potential pitfalls. It is intended for experimental neuroscientists and graduate students who have little formal training in mathematical methods, but it will also be useful for scientists with theoretical backgrounds who want to start using data-driven modeling methods. The mathematics needed are kept to an introductory level; the first chapter explains the mathematical methods the reader needs to master to understand the rest of the book. The chapters are written by scientists who have successfully integrated data-driven modeling with experimental work, so all of the material is accessible to experimentalists. The chapters offer comprehensive coverage with little overlap and extensive cross-references, moving from basic building blocks to more complex applications. Contributors Pablo Achard, Haroon Anwar, Upinder S. Bhalla, Michiel Berends, Nicolas Brunel, Ronald L. Calabrese, Brenda Claiborne, Hugo Cornelis, Erik De Schutter, Alain Destexhe, Bard Ermentrout, Kristen Harris, Sean Hill, John R. Huguenard, William R. Holmes, Gwen Jacobs, Gwendal LeMasson, Henry Markram, Reinoud Maex, Astrid A. Prinz, Imad Riachi, John Rinzel, Arnd Roth, Felix Schürmann, Werner Van Geit, Mark C. W. van Rossum, Stefan Wils

Exploration of Cortical Function

Author : M. Stetter
Publisher : Springer Science & Business Media
ISBN 13 : 9401004307
Total Pages : 269 pages
Book Rating : 4.4/5 (1 download)

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Book Synopsis Exploration of Cortical Function by : M. Stetter

Download or read book Exploration of Cortical Function written by M. Stetter and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 269 pages. Available in PDF, EPUB and Kindle. Book excerpt: Exploration of Cortical Function summarizes recent research efforts aiming at the revelation of cortical population coding and signal processing strategies. Topics include optical detection techniques of population activity in the sub-millimeter range, advanced methods for the statistical analysis of these data, and biologically inspired neuronal modeling techniques for population activities in the frameworks of optimal coding, statistical learning theory, and mean-field recurrent networks. Exploration of Cortical Function is unique in that it covers one complete branch of population-based brain research ranging from techniques for data acquisition over data analysis up to modeling techniques for the quantification of functional principles. The volume covers an area which is of great current interest to researchers working on cerebral cortex. The combination of models and image analysis techniques to examine the activity of large cohorts of neurons is especially intriguing and prone to considerable error and debate.

Neural Modeling and Neural Networks

Author : F. Ventriglia
Publisher : Elsevier
ISBN 13 : 1483287904
Total Pages : 363 pages
Book Rating : 4.4/5 (832 download)

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Book Synopsis Neural Modeling and Neural Networks by : F. Ventriglia

Download or read book Neural Modeling and Neural Networks written by F. Ventriglia and published by Elsevier. This book was released on 2013-10-22 with total page 363 pages. Available in PDF, EPUB and Kindle. Book excerpt: Research in neural modeling and neural networks has escalated dramatically in the last decade, acquiring along the way terms and concepts, such as learning, memory, perception, recognition, which are the basis of neuropsychology. Nevertheless, for many, neural modeling remains controversial in its purported ability to describe brain activity. The difficulties in "modeling" are various, but arise principally in identifying those elements that are fundamental for the expression (and description) of superior neural activity. This is complicated by our incomplete knowledge of neural structures and functions, at the cellular and population levels. The first step towards enhanced appreciation of the value of neural modeling and neural networks is to be aware of what has been achieved in this multidisciplinary field of research. This book sets out to create such awareness. Leading experts develop in twelve chapters the key topics of neural structures and functions, dynamics of single neurons, oscillations in groups of neurons, randomness and chaos in neural activity, (statistical) dynamics of neural networks, learning, memory and pattern recognition.

Stochastic Neuron Models

Author : Priscilla E. Greenwood
Publisher : Springer
ISBN 13 : 3319269119
Total Pages : 75 pages
Book Rating : 4.3/5 (192 download)

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Book Synopsis Stochastic Neuron Models by : Priscilla E. Greenwood

Download or read book Stochastic Neuron Models written by Priscilla E. Greenwood and published by Springer. This book was released on 2016-02-02 with total page 75 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes a large number of open problems in the theory of stochastic neural systems, with the aim of enticing probabilists to work on them. This includes problems arising from stochastic models of individual neurons as well as those arising from stochastic models of the activities of small and large networks of interconnected neurons. The necessary neuroscience background to these problems is outlined within the text, so readers can grasp the context in which they arise. This book will be useful for graduate students and instructors providing material and references for applying probability to stochastic neuron modeling. Methods and results are presented, but the emphasis is on questions where additional stochastic analysis may contribute neuroscience insight. An extensive bibliography is included. Dr. Priscilla E. Greenwood is a Professor Emerita in the Department of Mathematics at the University of British Columbia. Dr. Lawrence M. Ward is a Professor in the Department of Psychology and the Brain Research Centre at the University of British Columbia.

Neuronal Stochastic Variability: Influences on Spiking Dynamics and Network Activity

Author : Mark D. McDonnell
Publisher : Frontiers Media SA
ISBN 13 : 2889198847
Total Pages : 158 pages
Book Rating : 4.8/5 (891 download)

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Book Synopsis Neuronal Stochastic Variability: Influences on Spiking Dynamics and Network Activity by : Mark D. McDonnell

Download or read book Neuronal Stochastic Variability: Influences on Spiking Dynamics and Network Activity written by Mark D. McDonnell and published by Frontiers Media SA. This book was released on 2016-07-18 with total page 158 pages. Available in PDF, EPUB and Kindle. Book excerpt: Stochastic fluctuations are intrinsic to and unavoidable at every stage of neural dynamics. For example, ion channels undergo random conformational changes, neurotransmitter release at synapses is discrete and probabilistic, and neural networks are embedded in spontaneous background activity. The mathematical and computational tool sets contributing to our understanding of stochastic neural dynamics have expanded rapidly in recent years. New theories have emerged detailing the dynamics and computational power of the balanced state in recurrent networks. At the cellular level, novel stochastic extensions to the classical Hodgkin-Huxley model have enlarged our understanding of neuronal dynamics and action potential initiation. Analytical methods have been developed that allow for the calculation of the firing statistics of simplified phenomenological integrate-and-fire models, taking into account adaptation currents or temporal correlations of the noise. This Research Topic is focused on identified physiological/internal noise sources and mechanisms. By "internal", we mean variability that is generated by intrinsic biophysical processes. This includes noise at a range of scales, from ion channels to synapses to neurons to networks. The contributions in this Research Topic introduce innovative mathematical analysis and/or computational methods that relate to empirical measures of neural activity and illuminate the functional role of intrinsic noise in the brain.

The Relevance of the Time Domain to Neural Network Models

Author : A. Ravishankar Rao
Publisher : Springer Science & Business Media
ISBN 13 : 1461407249
Total Pages : 234 pages
Book Rating : 4.4/5 (614 download)

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Book Synopsis The Relevance of the Time Domain to Neural Network Models by : A. Ravishankar Rao

Download or read book The Relevance of the Time Domain to Neural Network Models written by A. Ravishankar Rao and published by Springer Science & Business Media. This book was released on 2011-09-18 with total page 234 pages. Available in PDF, EPUB and Kindle. Book excerpt: A significant amount of effort in neural modeling is directed towards understanding the representation of information in various parts of the brain, such as cortical maps [6], and the paths along which sensory information is processed. Though the time domain is integral an integral aspect of the functioning of biological systems, it has proven very challenging to incorporate the time domain effectively in neural network models. A promising path that is being explored is to study the importance of synchronization in biological systems. Synchronization plays a critical role in the interactions between neurons in the brain, giving rise to perceptual phenomena, and explaining multiple effects such as visual contour integration, and the separation of superposed inputs. The purpose of this book is to provide a unified view of how the time domain can be effectively employed in neural network models. A first direction to consider is to deploy oscillators that model temporal firing patterns of a neuron or a group of neurons. There is a growing body of research on the use of oscillatory neural networks, and their ability to synchronize under the right conditions. Such networks of synchronizing elements have been shown to be effective in image processing and segmentation tasks, and also in solving the binding problem, which is of great significance in the field of neuroscience. The oscillatory neural models can be employed at multiple scales of abstraction, ranging from individual neurons, to groups of neurons using Wilson-Cowan modeling techniques and eventually to the behavior of entire brain regions as revealed in oscillations observed in EEG recordings. A second interesting direction to consider is to understand the effect of different neural network topologies on their ability to create the desired synchronization. A third direction of interest is the extraction of temporal signaling patterns from brain imaging data such as EEG and fMRI. Hence this Special Session is of emerging interest in the brain sciences, as imaging techniques are able to resolve sufficient temporal detail to provide an insight into how the time domain is deployed in cognitive function. The following broad topics will be covered in the book: Synchronization, phase-locking behavior, image processing, image segmentation, temporal pattern analysis, EEG analysis, fMRI analyis, network topology and synchronizability, cortical interactions involving synchronization, and oscillatory neural networks. This book will benefit readers interested in the topics of computational neuroscience, applying neural network models to understand brain function, extracting temporal information from brain imaging data, and emerging techniques for image segmentation using oscillatory networks

Computational Methods in Neural Modeling

Author : José Mira
Publisher : Springer
ISBN 13 : 9783662201848
Total Pages : 772 pages
Book Rating : 4.2/5 (18 download)

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Book Synopsis Computational Methods in Neural Modeling by : José Mira

Download or read book Computational Methods in Neural Modeling written by José Mira and published by Springer. This book was released on 2014-03-12 with total page 772 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Modeling Phase Transitions in the Brain

Author : D. Alistair Steyn-Ross
Publisher : Springer Science & Business Media
ISBN 13 : 1441907963
Total Pages : 325 pages
Book Rating : 4.4/5 (419 download)

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Book Synopsis Modeling Phase Transitions in the Brain by : D. Alistair Steyn-Ross

Download or read book Modeling Phase Transitions in the Brain written by D. Alistair Steyn-Ross and published by Springer Science & Business Media. This book was released on 2010-03-14 with total page 325 pages. Available in PDF, EPUB and Kindle. Book excerpt: Foreword by Walter J. Freeman. The induction of unconsciousness using anesthetic agents demonstrates that the cerebral cortex can operate in two very different behavioral modes: alert and responsive vs. unaware and quiescent. But the states of wakefulness and sleep are not single-neuron properties---they emerge as bulk properties of cooperating populations of neurons, with the switchover between states being similar to the physical change of phase observed when water freezes or ice melts. Some brain-state transitions, such as sleep cycling, anesthetic induction, epileptic seizure, are obvious and detected readily with a few EEG electrodes; others, such as the emergence of gamma rhythms during cognition, or the ultra-slow BOLD rhythms of relaxed free-association, are much more subtle. The unifying theme of this book is the notion that all of these bulk changes in brain behavior can be treated as phase transitions between distinct brain states. Modeling Phase Transitions in the Brain contains chapter contributions from leading researchers who apply state-space methods, network models, and biophysically-motivated continuum approaches to investigate a range of neuroscientifically relevant problems that include analysis of nonstationary EEG time-series; network topologies that limit epileptic spreading; saddle--node bifurcations for anesthesia, sleep-cycling, and the wake--sleep switch; prediction of dynamical and noise-induced spatiotemporal instabilities underlying BOLD, alpha-, and gamma-band Hopf oscillations, gap-junction-moderated Turing structures, and Hopf-Turing interactions leading to cortical waves.