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Mathematical Modelling In Plant Biology
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Book Synopsis Mathematical Modelling in Plant Biology by : Richard J. Morris
Download or read book Mathematical Modelling in Plant Biology written by Richard J. Morris and published by Springer. This book was released on 2018-11-05 with total page 230 pages. Available in PDF, EPUB and Kindle. Book excerpt: Progress in plant biology relies on the quantification, analysis and mathematical modeling of data over different time and length scales. This book describes common mathematical and computational approaches as well as some carefully chosen case studies that demonstrate the use of these techniques to solve problems at the forefront of plant biology. Each chapter is written by an expert in field with the goal of conveying concepts whilst at the same time providing sufficient background and links to available software for readers to rapidly build their own models and run their own simulations. This book is aimed at postgraduate students and researchers working the field of plant systems biology and synthetic biology, but will also be a useful reference for anyone wanting to get into quantitative plant biology.
Book Synopsis Mathematical Models in Agriculture by : J. H. M. Thornley
Download or read book Mathematical Models in Agriculture written by J. H. M. Thornley and published by CABI. This book was released on 2007 with total page 924 pages. Available in PDF, EPUB and Kindle. Book excerpt: Role of mathematical models; Dynamic deterministic models; Mathematical programming; Basic biological processes; Growth functions; Simple dynamic growth models; Simple ecological models; Envinment and weather; Plant and crop processes; Crop models; Crop husbandry; Plant diseases and pests; Animal processes; Animal organs; Whole-animal models; Animal products; Animal husbandry; Animal diseases; Solutions exercises; Mathematical glossary.
Book Synopsis Exploring Mathematical Modeling in Biology Through Case Studies and Experimental Activities by : Rebecca Sanft
Download or read book Exploring Mathematical Modeling in Biology Through Case Studies and Experimental Activities written by Rebecca Sanft and published by Academic Press. This book was released on 2020-04-01 with total page 260 pages. Available in PDF, EPUB and Kindle. Book excerpt: Exploring Mathematical Modeling in Biology through Case Studies and Experimental Activities provides supporting materials for courses taken by students majoring in mathematics, computer science or in the life sciences. The book's cases and lab exercises focus on hypothesis testing and model development in the context of real data. The supporting mathematical, coding and biological background permit readers to explore a problem, understand assumptions, and the meaning of their results. The experiential components provide hands-on learning both in the lab and on the computer. As a beginning text in modeling, readers will learn to value the approach and apply competencies in other settings. Included case studies focus on building a model to solve a particular biological problem from concept and translation into a mathematical form, to validating the parameters, testing the quality of the model and finally interpreting the outcome in biological terms. The book also shows how particular mathematical approaches are adapted to a variety of problems at multiple biological scales. Finally, the labs bring the biological problems and the practical issues of collecting data to actually test the model and/or adapting the mathematics to the data that can be collected.
Book Synopsis Mathematical Models in Biology by : Elizabeth Spencer Allman
Download or read book Mathematical Models in Biology written by Elizabeth Spencer Allman and published by Cambridge University Press. This book was released on 2004 with total page 388 pages. Available in PDF, EPUB and Kindle. Book excerpt: This introductory textbook on mathematical biology focuses on discrete models across a variety of biological subdisciplines. Biological topics treated include linear and non-linear models of populations, Markov models of molecular evolution, phylogenetic tree construction, genetics, and infectious disease models. The coverage of models of molecular evolution and phylogenetic tree construction from DNA sequence data is unique among books at this level. Computer investigations with MATLAB are incorporated throughout, in both exercises and more extensive projects, to give readers hands-on experience with the mathematical models developed. MATLAB programs accompany the text. Mathematical tools, such as matrix algebra, eigenvector analysis, and basic probability, are motivated by biological models and given self-contained developments, so that mathematical prerequisites are minimal.
Book Synopsis Plant and Crop Modelling by : J. H. M. Thornley
Download or read book Plant and Crop Modelling written by J. H. M. Thornley and published by . This book was released on 2000 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is a textbook (it includes, for example, exercises and outline solutions). The plant scientist is shown how to express physiological ideas mathematically and how to deduce quantitative conclusions, which can then be compared with experiment. There is little new biology in the book, but it is presented in a way that will be new to many biologists. The matching of models to experiments means using mathematics for formulating biological concepts and second, using algebra, calculus, or, now more frequently, computers to solve or simulate the resulting model; and finally, comparing, qualitatively or quantitatively, prediction to measurement. Computers are the important enabling technology that makes it all possible: solving equations, assembling models of increasing sophistication and complexity, and comparing theory with experiment. The book is divided into three parts. Part I. Covers subjects of wide relevance to modelling and plant biology. Part II. The reader may choose to select topics of particular interest from part II. However, the whole-plant modeller will need to study all chapters, and the plant ecosystem modeller may need to add other material also. Part III. Plant morphology is at an introductory level. It is included because morphological characters may prove to be of equal importance to some physiological traits in determining plant function and performance. "This textbook presents, in an interesting and clearly written fashion, a mathematical approach to a wide range of topics in plant and crop physiology, including light interception, leaf and canopy photosynthesis, respiration, partitioning, transpiration and water relations, branching and phyllotaxis. The biochemistry of plant growth and maintenanace is also presented in some detail. I was very pleased with the text, especially with the philosophy presented by the authors that biological models are necessarily simplifications of complex detail. I would strongly recommend it for reading and consultation by graduates and research workers." J. Exp. Botany "The authors' approach succeeds admirably, giving a thorough account of the mathematical toolbox available to researchers and the areas in which those tools have been used." Plant, Cell and Environment "Combining considerable technical cleverness with creativity and the refreshing notion that science is a "common-sense, unpredictable, fascinating and thoroughly human activity." Times Higher Educational Supplement "Exceptionally scholarly volume. Logical and systematic. Authors have assembled a mass of mathematical material in an elegant layout." Agricultural Systems
Book Synopsis A Biologist's Guide to Mathematical Modeling in Ecology and Evolution by : Sarah P. Otto
Download or read book A Biologist's Guide to Mathematical Modeling in Ecology and Evolution written by Sarah P. Otto and published by Princeton University Press. This book was released on 2011-09-19 with total page 745 pages. Available in PDF, EPUB and Kindle. Book excerpt: Thirty years ago, biologists could get by with a rudimentary grasp of mathematics and modeling. Not so today. In seeking to answer fundamental questions about how biological systems function and change over time, the modern biologist is as likely to rely on sophisticated mathematical and computer-based models as traditional fieldwork. In this book, Sarah Otto and Troy Day provide biology students with the tools necessary to both interpret models and to build their own. The book starts at an elementary level of mathematical modeling, assuming that the reader has had high school mathematics and first-year calculus. Otto and Day then gradually build in depth and complexity, from classic models in ecology and evolution to more intricate class-structured and probabilistic models. The authors provide primers with instructive exercises to introduce readers to the more advanced subjects of linear algebra and probability theory. Through examples, they describe how models have been used to understand such topics as the spread of HIV, chaos, the age structure of a country, speciation, and extinction. Ecologists and evolutionary biologists today need enough mathematical training to be able to assess the power and limits of biological models and to develop theories and models themselves. This innovative book will be an indispensable guide to the world of mathematical models for the next generation of biologists. A how-to guide for developing new mathematical models in biology Provides step-by-step recipes for constructing and analyzing models Interesting biological applications Explores classical models in ecology and evolution Questions at the end of every chapter Primers cover important mathematical topics Exercises with answers Appendixes summarize useful rules Labs and advanced material available
Book Synopsis Methods and Models in Mathematical Biology by : Johannes Müller
Download or read book Methods and Models in Mathematical Biology written by Johannes Müller and published by Springer. This book was released on 2015-08-13 with total page 721 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book developed from classes in mathematical biology taught by the authors over several years at the Technische Universität München. The main themes are modeling principles, mathematical principles for the analysis of these models and model-based analysis of data. The key topics of modern biomathematics are covered: ecology, epidemiology, biochemistry, regulatory networks, neuronal networks and population genetics. A variety of mathematical methods are introduced, ranging from ordinary and partial differential equations to stochastic graph theory and branching processes. A special emphasis is placed on the interplay between stochastic and deterministic models.
Book Synopsis Modelling Nature by : Edward Gillman
Download or read book Modelling Nature written by Edward Gillman and published by CABI. This book was released on 2019-05-30 with total page 281 pages. Available in PDF, EPUB and Kindle. Book excerpt: This short textbook introduces students to the concept of describing natural systems using mathematical models. We highlight the variety of ways in which natural systems lend themselves to mathematical description and the importance of models in revealing fundamental processes. The process of science via the building, testing and use of models (theories) is described and forms the structure of the book. The book covers a broad range from the molecular to ecosystems and whole-Earth phenomena. Themes running through the chapters include scale (temporal and spatial), change (linear and nonlinear), emergent phenomena and uncertainty. Mathematical descriptions are kept to a minimum and we illustrate mechanisms and results in graphical form wherever possible. Essential mathematical details are described fully, with the use of boxes. The mathematics supports but does not lead the text.
Author :Przemyslaw Prusinkiewicz Publisher :Springer Science & Business Media ISBN 13 :1461384761 Total Pages :235 pages Book Rating :4.4/5 (613 download)
Book Synopsis The Algorithmic Beauty of Plants by : Przemyslaw Prusinkiewicz
Download or read book The Algorithmic Beauty of Plants written by Przemyslaw Prusinkiewicz and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 235 pages. Available in PDF, EPUB and Kindle. Book excerpt: Now available in an affordable softcover edition, this classic in Springer's acclaimed Virtual Laboratory series is the first comprehensive account of the computer simulation of plant development. 150 illustrations, one third of them in colour, vividly demonstrate the spectacular results of the algorithms used to model plant shapes and developmental processes. The latest in computer-generated images allow us to look at plants growing, self-replicating, responding to external factors and even mutating, without becoming entangled in the underlying mathematical formulae involved. The authors place particular emphasis on Lindenmayer systems - a notion conceived by one of the authors, Aristid Lindenmayer, and internationally recognised for its exceptional elegance in modelling biological phenomena. Nonetheless, the two authors take great care to present a survey of alternative methods for plant modelling.
Book Synopsis Mathematical Concepts and Methods in Modern Biology by : Raina Robeva
Download or read book Mathematical Concepts and Methods in Modern Biology written by Raina Robeva and published by Academic Press. This book was released on 2013-02-26 with total page 373 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematical Concepts and Methods in Modern Biology offers a quantitative framework for analyzing, predicting, and modulating the behavior of complex biological systems. The book presents important mathematical concepts, methods and tools in the context of essential questions raised in modern biology.Designed around the principles of project-based learning and problem-solving, the book considers biological topics such as neuronal networks, plant population growth, metabolic pathways, and phylogenetic tree reconstruction. The mathematical modeling tools brought to bear on these topics include Boolean and ordinary differential equations, projection matrices, agent-based modeling and several algebraic approaches. Heavy computation in some of the examples is eased by the use of freely available open-source software. - Features self-contained chapters with real biological research examples using freely available computational tools - Spans several mathematical techniques at basic to advanced levels - Offers broad perspective on the uses of algebraic geometry/polynomial algebra in molecular systems biology
Book Synopsis Mathematical Modeling in Systems Biology by : Brian P. Ingalls
Download or read book Mathematical Modeling in Systems Biology written by Brian P. Ingalls and published by MIT Press. This book was released on 2022-06-07 with total page 423 pages. Available in PDF, EPUB and Kindle. Book excerpt: An introduction to the mathematical concepts and techniques needed for the construction and analysis of models in molecular systems biology. Systems techniques are integral to current research in molecular cell biology, and system-level investigations are often accompanied by mathematical models. These models serve as working hypotheses: they help us to understand and predict the behavior of complex systems. This book offers an introduction to mathematical concepts and techniques needed for the construction and interpretation of models in molecular systems biology. It is accessible to upper-level undergraduate or graduate students in life science or engineering who have some familiarity with calculus, and will be a useful reference for researchers at all levels. The first four chapters cover the basics of mathematical modeling in molecular systems biology. The last four chapters address specific biological domains, treating modeling of metabolic networks, of signal transduction pathways, of gene regulatory networks, and of electrophysiology and neuronal action potentials. Chapters 3–8 end with optional sections that address more specialized modeling topics. Exercises, solvable with pen-and-paper calculations, appear throughout the text to encourage interaction with the mathematical techniques. More involved end-of-chapter problem sets require computational software. Appendixes provide a review of basic concepts of molecular biology, additional mathematical background material, and tutorials for two computational software packages (XPPAUT and MATLAB) that can be used for model simulation and analysis.
Book Synopsis Mathematical Models of Biological Systems by : Hugo van den Berg
Download or read book Mathematical Models of Biological Systems written by Hugo van den Berg and published by OUP Oxford. This book was released on 2010-11-25 with total page 250 pages. Available in PDF, EPUB and Kindle. Book excerpt: This interdisciplinary textbook provides a practical introduction to basic mathematical modelling methodology and analysis. It covers a variety of biological applications and uses these topics in turn to highlight key components in the art of modelling.
Book Synopsis Topics in Mathematical Modeling by : Ka-Kit Tung
Download or read book Topics in Mathematical Modeling written by Ka-Kit Tung and published by Princeton University Press. This book was released on 2016-06-14 with total page 319 pages. Available in PDF, EPUB and Kindle. Book excerpt: Topics in Mathematical Modeling is an introductory textbook on mathematical modeling. The book teaches how simple mathematics can help formulate and solve real problems of current research interest in a wide range of fields, including biology, ecology, computer science, geophysics, engineering, and the social sciences. Yet the prerequisites are minimal: calculus and elementary differential equations. Among the many topics addressed are HIV; plant phyllotaxis; global warming; the World Wide Web; plant and animal vascular networks; social networks; chaos and fractals; marriage and divorce; and El Niño. Traditional modeling topics such as predator-prey interaction, harvesting, and wars of attrition are also included. Most chapters begin with the history of a problem, follow with a demonstration of how it can be modeled using various mathematical tools, and close with a discussion of its remaining unsolved aspects. Designed for a one-semester course, the book progresses from problems that can be solved with relatively simple mathematics to ones that require more sophisticated methods. The math techniques are taught as needed to solve the problem being addressed, and each chapter is designed to be largely independent to give teachers flexibility. The book, which can be used as an overview and introduction to applied mathematics, is particularly suitable for sophomore, junior, and senior students in math, science, and engineering.
Download or read book Modeling Life written by Alan Garfinkel and published by Springer. This book was released on 2017-09-06 with total page 456 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book develops the mathematical tools essential for students in the life sciences to describe interacting systems and predict their behavior. From predator-prey populations in an ecosystem, to hormone regulation within the body, the natural world abounds in dynamical systems that affect us profoundly. Complex feedback relations and counter-intuitive responses are common in nature; this book develops the quantitative skills needed to explore these interactions. Differential equations are the natural mathematical tool for quantifying change, and are the driving force throughout this book. The use of Euler’s method makes nonlinear examples tractable and accessible to a broad spectrum of early-stage undergraduates, thus providing a practical alternative to the procedural approach of a traditional Calculus curriculum. Tools are developed within numerous, relevant examples, with an emphasis on the construction, evaluation, and interpretation of mathematical models throughout. Encountering these concepts in context, students learn not only quantitative techniques, but how to bridge between biological and mathematical ways of thinking. Examples range broadly, exploring the dynamics of neurons and the immune system, through to population dynamics and the Google PageRank algorithm. Each scenario relies only on an interest in the natural world; no biological expertise is assumed of student or instructor. Building on a single prerequisite of Precalculus, the book suits a two-quarter sequence for first or second year undergraduates, and meets the mathematical requirements of medical school entry. The later material provides opportunities for more advanced students in both mathematics and life sciences to revisit theoretical knowledge in a rich, real-world framework. In all cases, the focus is clear: how does the math help us understand the science?
Book Synopsis Mathematical Modelling in Biomedicine by : Vitaly Volpert
Download or read book Mathematical Modelling in Biomedicine written by Vitaly Volpert and published by MDPI. This book was released on 2021-01-26 with total page 224 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematical modelling in biomedicine is a rapidly developing scientific discipline at the intersection of medicine, biology, mathematics, physics, and computer science. Its progress is stimulated by fundamental scientific questions and by the applications to public health. This book represents a collection of papers devoted to mathematical modelling of various physiological problems in normal and pathological conditions. It covers a broad range of topics including cardiovascular system and diseases, heart and brain modelling, tumor growth, viral infections, and immune response. Computational models of blood circulation are used to study the influence of heart arrhythmias on coronary blood flow and on operating modes for left-ventricle-assisted devices. Wave propagation in the cardiac tissue is investigated in order to show the influence of tissue heterogeneity and fibrosis. The models of tumor growth are used to determine optimal protocols of antiangiogenic and radiotherapy. The models of viral hepatitis kinetics are considered for the parameter identification, and the evolution of viral quasi-species is investigated. The book presents the state-of-the-art in mathematical modelling in biomedicine and opens new perspectives in this passionate field of research.
Book Synopsis Introduction to Mathematical Modeling of Crop Growth by : Christopher B. S. Teh
Download or read book Introduction to Mathematical Modeling of Crop Growth written by Christopher B. S. Teh and published by Dissertation.com. This book was released on 2006 with total page 278 pages. Available in PDF, EPUB and Kindle. Book excerpt: Learning mathematical modeling need not be difficult. Unlike other books, this book not only lists the equations one-by-one, but explains in detail how they are each derived, used, and finally assembled into a computer program for model simulations. This book shows how mathematics is applied in agriculture, in particular to modeling the growth and yield of a generic crop. Topics covered are agriculture meteorology, solar radiation interception and absorption, evapotranspiration, energy and soil water balance, soil water flow, photosynthesis, respiration, and crop growth development. Rather than covering many modeling approaches but in superficial detail, this book selects one or two widely-used modeling approaches and discusses about them in depth. Principles learned from this book equips readers when they encounter other modeling approaches or when they develop their own crop models.
Book Synopsis Modelling for Field Biologists and Other Interesting People by : Hanna Kokko
Download or read book Modelling for Field Biologists and Other Interesting People written by Hanna Kokko and published by Cambridge University Press. This book was released on 2007-06-28 with total page 194 pages. Available in PDF, EPUB and Kindle. Book excerpt: Students of evolutionary and behavioural ecology are often unfamiliar with mathematical techniques, though much of biology relies on mathematics. Evolutionary ideas are often complex, meaning that the logic of hypotheses proposed should not only be tested empirically but also mathematically. There are numerous different modelling tools used by ecologists, ranging from population genetic 'bookkeeping', to game theory and individual-based computer simulations. Due to the many different modelling options available, it is often difficult to know where to start. Hanna Kokko has designed this 2007 book to help with these decisions. Each method described is illustrated with one or two biologically interesting examples that have been chosen to help overcome fears of many biologists when faced with mathematical work, whilst also providing the programming code (Matlab) for each problem. Aimed primarily at students of evolutionary and behavioural ecology, this book will be of interest to any biologist interested in mathematical modelling.
