Marine Metagenomics

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Marine Metagenomics

Author : Takashi Gojobori
Publisher : Springer
ISBN 13 : 9811381348
Total Pages : 271 pages
Book Rating : 4.8/5 (113 download)

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Book Synopsis Marine Metagenomics by : Takashi Gojobori

Download or read book Marine Metagenomics written by Takashi Gojobori and published by Springer. This book was released on 2019-07-24 with total page 271 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents the state-of-art marine metagenome research and explains the method of marine metagenomic analysis in an easy-to-understand manner. Changes in the marine environment due to global warming and pollution have become a major global problem. Maintaining a healthy marine ecosystem requires advanced environmental monitoring and assessment systems. As such, the book presents a novel metagenomic monitoring method, which has been developed for comprehensive analyses of the DNA of microorganisms living in seawater to further our understanding of the dynamics of the marine environment. The book can be used as a primer for new researchers and as a manual on experimental methods.

The New Science of Metagenomics

Author : National Research Council
Publisher : National Academies Press
ISBN 13 : 0309106761
Total Pages : 170 pages
Book Rating : 4.3/5 (91 download)

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Book Synopsis The New Science of Metagenomics by : National Research Council

Download or read book The New Science of Metagenomics written by National Research Council and published by National Academies Press. This book was released on 2007-06-24 with total page 170 pages. Available in PDF, EPUB and Kindle. Book excerpt: Although we can't usually see them, microbes are essential for every part of human life-indeed all life on Earth. The emerging field of metagenomics offers a new way of exploring the microbial world that will transform modern microbiology and lead to practical applications in medicine, agriculture, alternative energy, environmental remediation, and many others areas. Metagenomics allows researchers to look at the genomes of all of the microbes in an environment at once, providing a "meta" view of the whole microbial community and the complex interactions within it. It's a quantum leap beyond traditional research techniques that rely on studying-one at a time-the few microbes that can be grown in the laboratory. At the request of the National Science Foundation, five Institutes of the National Institutes of Health, and the Department of Energy, the National Research Council organized a committee to address the current state of metagenomics and identify obstacles current researchers are facing in order to determine how to best support the field and encourage its success. The New Science of Metagenomics recommends the establishment of a "Global Metagenomics Initiative" comprising a small number of large-scale metagenomics projects as well as many medium- and small-scale projects to advance the technology and develop the standard practices needed to advance the field. The report also addresses database needs, methodological challenges, and the importance of interdisciplinary collaboration in supporting this new field.

Encyclopedia of Marine Biotechnology

Author : Se-Kwon Kim
Publisher : John Wiley & Sons
ISBN 13 : 1119143799
Total Pages : 3632 pages
Book Rating : 4.1/5 (191 download)

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Book Synopsis Encyclopedia of Marine Biotechnology by : Se-Kwon Kim

Download or read book Encyclopedia of Marine Biotechnology written by Se-Kwon Kim and published by John Wiley & Sons. This book was released on 2020-08-04 with total page 3632 pages. Available in PDF, EPUB and Kindle. Book excerpt: A keystone reference that presents both up-to-date research and the far-reaching applications of marine biotechnology Featuring contributions from 100 international experts in the field, this five-volume encyclopedia provides comprehensive coverage of topics in marine biotechnology. It starts with the history of the field and delivers a complete overview of marine biotechnology. It then offers information on marine organisms, bioprocess techniques, marine natural products, biomaterials, bioenergy, and algal biotechnology. The encyclopedia also covers marine food and biotechnology applications in areas such as pharmaceuticals, cosmeceuticals, and nutraceuticals. Each topic in Encyclopedia of Marine Biotechnology is followed by 10-30 subtopics. The reference looks at algae cosmetics, drugs, and fertilizers; biodiversity; chitins and chitosans; aeroplysinin-1, toluquinol, astaxanthin, and fucoxanthin; and algal and fish genomics. It examines neuro-protective compounds from marine microorganisms; potential uses and medical management of neurotoxic phycotoxins; and the role of metagenomics in exploring marine microbiomes. Other sections fully explore marine microbiology, pharmaceutical development, seafood science, and the new biotechnology tools that are being used in the field today. One of the first encyclopedic books to cater to experts in marine biotechnology Brings together a diverse range of research on marine biotechnology to bridge the gap between scientific research and the industrial arena Offers clear explanations accompanied by color illustrations of the techniques and applications discussed Contains studies of the applications of marine biotechnology in the field of biomedical sciences Edited by an experienced author with contributions from internationally recognized experts from around the globe Encyclopedia of Marine Biotechnology is a must-have resource for researchers, scientists, and marine biologists in the industry, as well as for students at the postgraduate and graduate level. It will also benefit companies focusing on marine biotechnology, pharmaceutical and biotechnology, and bioenergy.

Population Genomics: Marine Organisms

Author : Marjorie F. Oleksiak
Publisher : Springer Nature
ISBN 13 : 3030379361
Total Pages : 458 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis Population Genomics: Marine Organisms by : Marjorie F. Oleksiak

Download or read book Population Genomics: Marine Organisms written by Marjorie F. Oleksiak and published by Springer Nature. This book was released on 2019-12-31 with total page 458 pages. Available in PDF, EPUB and Kindle. Book excerpt: Population genomics has provided unprecedented opportunities to unravel the mysteries of marine organisms in the oceans' depths. The world's oceans, which make up 70% of our planet, encompass diverse habitats and host numerous unexplored populations and species. Population genomics studies of marine organisms are rapidly emerging and have the potential to transform our understanding of marine populations, species, and ecosystems, providing insights into how these organisms are evolving and how they respond to different stimuli and environments. This knowledge is critical for understanding the fundamental aspects of marine life, how marine organisms will respond to environmental changes, and how we can better protect and preserve marine biodiversity and resources. This book brings together leading experts in the field to address critical aspects of fundamental and applied research in marine species and share their research and insights crucial for understanding marine ecosystem diversity and function. It also discusses the challenges, opportunities and future perspectives of marine population genomics.

Virus Discovery by Metagenomics: The (Im)possibilities

Author : Bas E. Dutilh
Publisher : Frontiers Media SA
ISBN 13 : 2889453081
Total Pages : 218 pages
Book Rating : 4.8/5 (894 download)

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Book Synopsis Virus Discovery by Metagenomics: The (Im)possibilities by : Bas E. Dutilh

Download or read book Virus Discovery by Metagenomics: The (Im)possibilities written by Bas E. Dutilh and published by Frontiers Media SA. This book was released on 2017-10-25 with total page 218 pages. Available in PDF, EPUB and Kindle. Book excerpt: Since the late 1800s, the discovery of new viruses was a gradual process. Viruses were described one by one using a suite of techniques such as (electron) microscopy and viral culture. Investigators were usually interested in a disease state within an organism, and expeditions in viral ecology were rare. The advent of metagenomics using high-throughput sequencing has revolutionized not only the rate of virus discovery, but also the nature of the discoveries. For example, the viral ecology and etiology of many human diseases are being characterized, non-pathogenic viral commensals are ubiquitous, and the description of environmental viromes is making progress. This Frontiers in Virology Research Topic showcases how metagenomic and bioinformatic approaches have been combined to discover, classify and characterize novel viruses.

From Genes to Species: Novel Insights from Metagenomics

Author : Eamonn P. Culligan
Publisher : Frontiers Media SA
ISBN 13 : 2889199754
Total Pages : 231 pages
Book Rating : 4.8/5 (891 download)

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Book Synopsis From Genes to Species: Novel Insights from Metagenomics by : Eamonn P. Culligan

Download or read book From Genes to Species: Novel Insights from Metagenomics written by Eamonn P. Culligan and published by Frontiers Media SA. This book was released on 2016-10-07 with total page 231 pages. Available in PDF, EPUB and Kindle. Book excerpt: The majority of microbes in many environments are considered “as yet uncultured” and were traditionally considered inaccessible for study through the microbiological gold standard of pure culture. The emergence of metagenomic approaches has allowed researchers to access and study these microbes in a culture-independent manner through DNA sequencing and functional expression of metagenomic DNA in a heterologous host. Metagenomics has revealed an extraordinary degree of diversity and novelty, not only among microbial communities themselves, but also within the genomes of these microbes. This Research Topic aims to showcase the utility of metagenomics to gain insights on the microbial and genomic diversity in different environments by revealing the breadth of novelty that was in the past, largely untapped.

Springer Handbook of Marine Biotechnology

Author : Se-Kwon Kim
Publisher : Springer
ISBN 13 : 3642539718
Total Pages : 1517 pages
Book Rating : 4.6/5 (425 download)

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Book Synopsis Springer Handbook of Marine Biotechnology by : Se-Kwon Kim

Download or read book Springer Handbook of Marine Biotechnology written by Se-Kwon Kim and published by Springer. This book was released on 2015-01-21 with total page 1517 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Springer Handbook provides, for the first time, a complete and consistent overview over the methods, applications, and products in the field of marine biotechnology. A large portion of the surface of the earth (ca. 70%) is covered by the oceans. More than 80% of the living organisms on the earth are found in aquatic ecosystems. The aquatic systems thus constitute a rich reservoir for various chemical materials and (bio-)chemical processes. Edited by a renowned expert with a longstanding experience, and including over 60 contributions from leading international scientists, the Springer Handbook of Marine Biotechnology is a major authoritative desk reference for everyone interested or working in the field of marine biotechnology and bioprocessing - from undergraduate and graduate students, over scientists and teachers, to professionals. Marine biotechnology is concerned with the study of biochemical materials and processes from marine sources, that play a vital role in the isolation of novel drugs, and to bring them to industrial and pharmaceutical development. Today, a multitude of bioprocess techniques is employed to isolate and produce marine natural compounds, novel biomaterials, or proteins and enzymes from marine organisms, and to bring them to applications as pharmaceuticals, cosmeceuticals or nutraceuticals, or for the production of bioenergy from marine sources. All these topics are addressed by the Springer Handbook of Marine Biotechnology. The book is divided into ten parts. Each part is consistently organized, so that the handbook provides a sound introduction to marine biotechnology - from historical backgrounds and the fundamentals, over the description of the methods and technology, to their applications - but it can also be used as a reference work. Key topics include: - Marine flora and fauna - Tools and methods in marine biotechnology - Marine genomics - Marine microbiology - Bioenergy and biofuels - Marine bioproducts in industrial applications - Marine bioproducts in medical and pharmaceutical applications - and many more...

Japanese Marine Life

Author : Kazuo Inaba
Publisher : Springer Nature
ISBN 13 : 9811513260
Total Pages : 367 pages
Book Rating : 4.8/5 (115 download)

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Book Synopsis Japanese Marine Life by : Kazuo Inaba

Download or read book Japanese Marine Life written by Kazuo Inaba and published by Springer Nature. This book was released on 2020-05-04 with total page 367 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book gives an overview of the diverse marine fauna and flora of Japan and includes practical guides for investigating the biology and ecology of marine organisms. Introducing marine training courses offered at a range of Japanese universities, this is the first English textbook intended for marine biology instructors and students in Japan. It provides essential information on experimental procedures for the major areas of marine biology, including cell and developmental biology, physiology, ecology and environmental sciences, and as such is a valuable resource for those in Asian countries that share a similar flora and fauna. It also appeals to visitors interested in attending Japanese marine courses from countries around the world.

Grand Challenges in Marine Biotechnology

Author : Pabulo H. Rampelotto
Publisher : Springer
ISBN 13 : 3319690752
Total Pages : 621 pages
Book Rating : 4.3/5 (196 download)

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Book Synopsis Grand Challenges in Marine Biotechnology by : Pabulo H. Rampelotto

Download or read book Grand Challenges in Marine Biotechnology written by Pabulo H. Rampelotto and published by Springer. This book was released on 2018-05-15 with total page 621 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book serves as essential reading for research scientists and biotechnologists from both academia and industry working in marine biotechnology and related disciplines. The book discusses recent advances and challenges in terms of science, technology, innovation, and policy for the development of the field; and how marine biotechnology may provide new solutions to some of the grand challenges faced by our society. Written in an accessible language, the book is also recommended as a reference text for decision-makers in government and non-governmental organizations in their efforts to foster the development of a global blue economy. With less than 5 % of the vast and rich marine environment explored, our seas and oceans represent a virtually unexplored resource for the discovery of novel product, processes, and development of bio-inspired synthetic drugs with biotechnological potential. As such, the marine environment has been considered Earth's last frontier of exploration. Recent advances in molecular techniques are providing the necessary tools to access on a larger scale the still-untapped ocean resources and, consequently, unveil the promise of the blue biotechnology. Governments are recognizing the potential of marine biotechnology to provide solutions to some of the Grand Challenges of the 21st Century such as sustainable energy and food sources, identification of novel drugs for improved health treatments, and providing new industrial materials and processes. For this reason, advances in marine biotechnology may foster the much-needed source of innovation and economic growth in many countries, and pave the way towards the development of a global blue economy, i.e. a new economic model based on the sustainable exploration of our ocean ecosystems.

Marine OMICS

Author : Se-Kwon Kim
Publisher : CRC Press
ISBN 13 : 131535506X
Total Pages : 922 pages
Book Rating : 4.3/5 (153 download)

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Book Synopsis Marine OMICS by : Se-Kwon Kim

Download or read book Marine OMICS written by Se-Kwon Kim and published by CRC Press. This book was released on 2016-11-18 with total page 922 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides comprehensive coverage on current trends in marine omics of various relevant topics such as genomics, lipidomics, proteomics, foodomics, transcriptomics, metabolomics, nutrigenomics, pharmacogenomics and toxicogenomics as related to and applied to marine biotechnology, molecular biology, marine biology, marine microbiology, environmental biotechnology, environmental science, aquaculture, pharmaceutical science and bioprocess engineering.

Metagenomics

Author : Wolfgang R. Streit
Publisher : Springer Nature
ISBN 13 : 1071627953
Total Pages : 290 pages
Book Rating : 4.0/5 (716 download)

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Book Synopsis Metagenomics by : Wolfgang R. Streit

Download or read book Metagenomics written by Wolfgang R. Streit and published by Springer Nature. This book was released on 2022-10-28 with total page 290 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume provides up-to-date and novel techniques for various screening technologies currently used in metagenomics and related areas. Starting with DNA/RNA isolation from environmental samples, the book continues by delving into areas such as current methods used to isolate DNA and construct metagenomic libraries, establishment of metagenome libraries in non-E. coli hosts, and topics like function-driven mining of metagenomic DNA, screening and analyzing protocols for a wide array of different genes encoding enzymes, bacterial viruses and much more. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step and readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Metagenomics: Methods and Protocols, Third Edition provides a comprehensive collection of up-to-date metagenome protocols and tools for the recovery of many major types of biocatalysts and allows for the easy setup of these screens in microbiology laboratories.

Metagenomics

Author : Muniyandi Nagarajan
Publisher : Academic Press
ISBN 13 : 0128134038
Total Pages : 400 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Metagenomics by : Muniyandi Nagarajan

Download or read book Metagenomics written by Muniyandi Nagarajan and published by Academic Press. This book was released on 2017-10-29 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: Metagenomics: Perspectives, Methods, and Applications provides thorough coverage of the growing field of metagenomics. A diverse range of chapters from international experts offer an introduction to the field and examine methods for metagenomic analysis of microbiota, metagenomic computational tools, and recent metagenomic studies in various environments. The emphasis on application makes this text particularly useful for applied researchers, practitioners, clinicians and students seeking to employ metagenomic approaches to advance knowledge in the biomedical and life sciences. Case-study based application chapters examine topics ranging from viral metagenome profiling, metagenomics in oral disease and health, metagenomic insights into the human gut microbiome and metabolic syndromes, and more. Additionally, perspectives on future potential at the end of each chapter provoke new thought and motivations for continued study in this exciting and fruitful research area. Provides thorough coverage of the rapidly growing field of metagenomics, with an emphasis on applications of relevance to translational researchers, practitioners, clinicians and students Features a diverse range of chapters from international experts that offer an introduction to the field and examine methods for metagenomic analysis of microbiota, metagenomic computational tools and research pipelines Highlights perspectives on future potential at the end of each chapter to provoke new thought and motivations for continued study in this exciting and fruitful research area

Computing for Comparative Microbial Genomics

Author : David Wayne Ussery
Publisher : Springer Science & Business Media
ISBN 13 : 1848002548
Total Pages : 272 pages
Book Rating : 4.8/5 (48 download)

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Book Synopsis Computing for Comparative Microbial Genomics by : David Wayne Ussery

Download or read book Computing for Comparative Microbial Genomics written by David Wayne Ussery and published by Springer Science & Business Media. This book was released on 2009-02-26 with total page 272 pages. Available in PDF, EPUB and Kindle. Book excerpt: Overview and Goals This book describes how to visualize and compare bacterial genomes. Sequencing technologies are becoming so inexpensive that soon going for a cup of coffee will be more expensive than sequencing a bacterial genome. Thus, there is a very real and pressing need for high-throughput computational methods to compare hundreds and thousands of bacterial genomes. It is a long road from molecular biology to systems biology, and in a sense this text can be thought of as a path bridging these ? elds. The goal of this book is to p- vide a coherent set of tools and a methodological framework for starting with raw DNA sequences and producing fully annotated genome sequences, and then using these to build up and test models about groups of interacting organisms within an environment or ecological niche. Organization and Features The text is divided into four main parts: Introduction, Comparative Genomics, Transcriptomics and Proteomics, and ? nally Microbial Communities. The ? rst ? ve chapters are introductions of various sorts. Each of these chapters represents an introduction to a speci? c scienti? c ? eld, to bring all readers up to the same basic level before proceeding on to the methods of comparing genomes. First, a brief overview of molecular biology and of the concept of sequences as biological inf- mation are given.

Marine Ecosystems: A Unique Source of Valuable Bioactive Compounds

Author : Hassan A.H. Ibrahim
Publisher : Bentham Science Publishers
ISBN 13 : 9815050001
Total Pages : 448 pages
Book Rating : 4.8/5 (15 download)

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Book Synopsis Marine Ecosystems: A Unique Source of Valuable Bioactive Compounds by : Hassan A.H. Ibrahim

Download or read book Marine Ecosystems: A Unique Source of Valuable Bioactive Compounds written by Hassan A.H. Ibrahim and published by Bentham Science Publishers. This book was released on 2023-11-06 with total page 448 pages. Available in PDF, EPUB and Kindle. Book excerpt: This reference highlights the significance of marine ecosystems, encompassing seaweed beds, seagrasses, coral reefs, mangroves, estuaries, and protected areas, as a remarkable gateway to overcoming healthcare challenges and unlocking a rich trove of bioactive compounds for drug discovery. One of the key highlights of this book is its exploration of the development of marine bio-drugs, a field that demands collaboration among scientists from both academic and industrial fronts. The editors also include a prospective review on marine environments, emphasizing the necessity for big data, collective knowledge sharing, financial support, and streamlined administrative processes, all of which contribute to enhancing innovation in the drug discovery process. Another feature includes reference lists that allow researchers to explore topics of interest in depth. With twelve comprehensive chapters, this book extensively covers marine ecosystem biodiversity, productivity, protected areas, and the intricate interplay of biotic and abiotic factors that shape these ecosystems. Readers will learn about important bioactive compounds within marine organisms and how to use this knowledge to outline a strategy for bio-drug discovery. The book caters to a diverse audience of researchers, students, ecologists, microbiologists, pharmacologists, and biotechnologists who are engaged in studying the dynamic components of marine environments. By providing the latest insights and strategies in the realm of bio-drug discovery from marine resources, this book serves as an invaluable resource for scholars and professionals seeking to tap into the potential of these unique ecosystems.

Introduction To Computational Metagenomics

Author : Zhong Wang
Publisher : World Scientific
ISBN 13 : 9811242488
Total Pages : 210 pages
Book Rating : 4.8/5 (112 download)

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Book Synopsis Introduction To Computational Metagenomics by : Zhong Wang

Download or read book Introduction To Computational Metagenomics written by Zhong Wang and published by World Scientific. This book was released on 2022-04-11 with total page 210 pages. Available in PDF, EPUB and Kindle. Book excerpt: Breakthroughs in high-throughput genome sequencing and high-performance computing technologies have empowered scientists to decode many genomes including our own. Now they have a bigger ambition: to fully understand the vast diversity of microbial communities within us and around us, and to exploit their potential for the improvement of our health and environment. In this new field called metagenomics, microbial genomes are sequenced directly from the habitats without lab cultivation. Computational metagenomics, however, faces both a data challenge that deals with tens of tera-bases of sequences and an algorithmic one that deals with the complexity of thousands of species and their interactions.This interdisciplinary book is essential reading for those who are interested in beginning their own journey in computational metagenomics. It is a prism to look through various intricate computational metagenomics problems and unravel their three distinctive aspects: metagenomics, data engineering, and algorithms. Graduate students and advanced undergraduates from genomics science or computer science fields will find that the concepts explained in this book can serve as stepping stones for more advanced topics, while metagenomics practitioners and researchers from similar disciplines may use it to broaden their knowledge or identify new research targets.

The Marine Microbiome

Author : Lucas J. Stal
Publisher : Springer Nature
ISBN 13 : 3030903834
Total Pages : 768 pages
Book Rating : 4.0/5 (39 download)

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Book Synopsis The Marine Microbiome by : Lucas J. Stal

Download or read book The Marine Microbiome written by Lucas J. Stal and published by Springer Nature. This book was released on 2022-02-28 with total page 768 pages. Available in PDF, EPUB and Kindle. Book excerpt: This updated and expanded second edition reviews numerous aspects of the marine microbiome and its possible industrial applications. The marine microbiome is the total of microorganisms and viruses in the ocean and seas and in any connected environment, including the seafloor and marine animals and plants. In the first part of the book, diversity, origin and evolution of the marine microorganisms and viruses are discussed. The microbes presented originate from all three domains of life: Bacteria, Archaea, and Eukarya. The second part sheds some light on the different communities: it describes marine habitats and how their inhabitants control biogeochemical cycles. The third part finally examines the microbial ocean as a global system and evaluates methods of utilizing marine microbial resources. Adopting a translational approach, the book connects academic research with industrial applications, making it a fascinating read and valuable resource for microbiologists from both domains.

Animal Biotechnology

Author : Ashish S. Verma
Publisher : Academic Press
ISBN 13 : 0128117109
Total Pages : 798 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Animal Biotechnology by : Ashish S. Verma

Download or read book Animal Biotechnology written by Ashish S. Verma and published by Academic Press. This book was released on 2020-06-23 with total page 798 pages. Available in PDF, EPUB and Kindle. Book excerpt: Animal Biotechnology: Models in Discovery and Translation, Second Edition, provides a helpful guide to anyone seeking a thorough review of animal biotechnology and its application to human disease and welfare. This updated edition covers vital fundamentals, including animal cell cultures, genome sequencing analysis, epigenetics and animal models, gene expression, and ethics and safety concerns, along with in-depth examples of implications for human health and prospects for the future. New chapters cover animal biotechnology as applied to various disease types and research areas, including in vitro fertilization, human embryonic stem cell research, biosensors, enteric diseases, biopharming, organ transplantation, tuberculosis, neurodegenerative disorders, and more. Highlights the latest biomedical applications of genetically modified and cloned animals, with a focus on cancer and infectious diseases Offers first-hand accounts of the use of biotechnology tools, including molecular markers, stem cells, animal cultures, tissue engineering, ADME and CAM Assay Includes case studies that illustrate safety assessment issues, ethical considerations, and intellectual property rights associated with the translation of animal biotechnology studies