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Identification Of Quantitative Trait Loci For Grain Yield In A Recombinant Inbred B Line Population In Sorghum
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Book Synopsis Identification of Quantitative Trait Loci for Grain Yield in a Recombinant Inbred B-line Population in Sorghum by : Adalberto Sanchez Gomez
Download or read book Identification of Quantitative Trait Loci for Grain Yield in a Recombinant Inbred B-line Population in Sorghum written by Adalberto Sanchez Gomez and published by . This book was released on 2002 with total page 186 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Quantitative Trait Loci Affecting the Agronomic Performance of a Sorghum Bicolor (L.) Moench Recombinant Inbred Restorer Line Population by : Jorge Luis Moran Maradiaga
Download or read book Quantitative Trait Loci Affecting the Agronomic Performance of a Sorghum Bicolor (L.) Moench Recombinant Inbred Restorer Line Population written by Jorge Luis Moran Maradiaga and published by . This book was released on 2003 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Lately the rate of genetic gain in most agronomic crop species has been reduced due to several factors that limit breeding efficiency and genetic gain. New genetic tools and more powerful statistical analyses provide an alternative approach to enhance genetic improvements through the identification of molecular markers linked to genomic regions or QTLs controlling quantitative traits. The main objective of this research was to identify genomic regions associated with enhanced agronomic performance in lines per se and hybrid combination in Sorghum bicolor (L.) Moench. A population composed of 187 F5:6 recombinant inbred lines (RIL) was derived from the cross of restorer lines RTx430 and RTx7000. Also, a testcross hybrid population (TCH) was developed by using each RIL as a pollinator onto ATx2752. A linkage map was constructed using 174 marker loci generated from AFLP and SSR primer combinations. These markers were assigned to 12 different linkage groups. The linkage map covers 1573 cM with marker loci spaced at an averaged 9.04 cM. In this study, 89 QTL that control variation in seven different morphological traits were identified in the recombinant inbred line population, while in the testcross hybrid population, 79 QTL were identified. These traits included grain yield, plant height, days to mid-anthesis, panicle number, panicle length, panicle exsertion and panicle weight. These putative QTL explained from 4 to 42% of the phenotypic variation observed for each trait. Many of the QTL were not consistent across populations and across environments. Nevertheless, a few key QTL were identified and the source of the positive additive genetics isolated. RTx7000 was consistently associated with better agronomic performance in RIL, while in testcrosses, RTx430 was. Some genomic regions from RTx7000 may be utilized to improve RTx430 as a line per se. However, it is very unlikely that such regions will have a positive effect on the combining ability of RTx430 since testcross results did not reveal any transgressive segregants from the RIL population.
Book Synopsis Identification of Quantitative Trait Loci for Gray Leaf Spot Resistance, Maturity, and Grain Yield in a Semi-tropical Recombinant Inbred Population of Maize by : Michael Phillip Jines
Download or read book Identification of Quantitative Trait Loci for Gray Leaf Spot Resistance, Maturity, and Grain Yield in a Semi-tropical Recombinant Inbred Population of Maize written by Michael Phillip Jines and published by . This book was released on 2004 with total page 153 pages. Available in PDF, EPUB and Kindle. Book excerpt: Keywords: qtl, maturity, gls resistance.
Book Synopsis Heritability and Quantitative Trait Loci for Popping Characteristics in Sorghum Grain by : Nicholas Ace Pugh
Download or read book Heritability and Quantitative Trait Loci for Popping Characteristics in Sorghum Grain written by Nicholas Ace Pugh and published by . This book was released on 2015 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Popped sorghum (Sorghum bicolor, L. Moench) is becoming increasingly popular with niche consumers. However, sorghum has not undergone the years of intensive selective breeding that popcorn has. This study measured popping characteristics and grain traits to estimate heritability, the relative effect of environment and genotype x environment interactions on these traits and to identify quantitative trait loci (QTL) for popping quality. Using a heated-air popping methodology, a recombinant inbred line population was phenotyped for popping characteristics in grain from three environments in Texas. Entry-mean heritability of popping efficiency (PE) ranged from 0.595 - 0.755 and the heritability of expansion ratio (ER) ranged from 0.617 - 0.769 across environments. ANOVA indicate that both environment and genotype x environment interactions were significant sources of variation. Using genome sequence mapping technology, five QTL were identified for popping efficiency and four were identified for expansion ratio. Additionally QTL for endosperm color, kernel diameter, kernel weight, and kernel hardness were found, and several of those were consistent across multiple production environments. These results indicate that popping quality a complex quantitative trait in sorghum, but improvement of popping efficiency, expansion ratio, and other kernel characteristics via marker-assisted selection is possible. The electronic version of this dissertation is accessible from http://hdl.handle.net/1969.1/155661
Download or read book Advances in Agronomy written by and published by Academic Press. This book was released on 2004-07-17 with total page 303 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Agronomy continues to be recognized as a leading reference and a first-rate source of the latest research in agronomy. Major reviews deal with the current topics of interest to agronomists, as well as crop and soil scientists. As always, the subjects covered are varied and exemplary of the myriad subject matter dealt with by this long-running serial. Editor Donald Sparks, former president of the Soil Science Society of America and current president of the International Union of Soil Science, is the S. Hallock du Pont Chair of Plant and Soil Sciences at The University of Delaware. Volume 83 contains five excellent reviews that discuss topics critical to agricultural and environmental sustainability. Maintains the highest impact factor among serial publications in Agriculture Presents timely reviews on important agronomy issues Enjoys a long-standing reputation for excellence in the field
Book Synopsis Bioenergy Feedstocks by : Malay C. Saha
Download or read book Bioenergy Feedstocks written by Malay C. Saha and published by John Wiley & Sons. This book was released on 2013-04-03 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioenergy and biofuels are generated from a wide variety of feedstock. Fuels have been converted from a wide range of sources from vegetable oils to grains and sugarcane. Second generation biofuels are being developed around dedicated, non-food energy crops, such as switchgrass and Miscanthus, with an eye toward bioenergy sustainability. Bioenergy Feedstocks: Breeding and Genetics looks at advances in our understanding of the genetics and breeding practices across this diverse range of crops and provides readers with a valuable tool to improve cultivars and increase energy crop yields. Bioenergy Feedstocks: Breeding and Genetics opens with chapters focusing primarily on advances in the genetics and molecular biology of dedicated energy crops. These chapters provide in-depth coverage of new, high-potential feedstocks. The remaining chapters provide valuable overview of breeding efforts of current feedstocks with specific attention paid to the development of bioenergy traits. Coverage in these chapters includes crops such as sorghum, energy canes, corn, and other grasses and forages. The final chapters explore the role of transgenics in bioenergy feedstock production and the development of low-input strategies for producing bioenergy crops. A timely collection of work from a global team of bioenergy researchers and crop scientists, Bioenergy Feedstocks: Breeding and Genetics is an essential reference on cultivar improvement of biomass feedstock crops.
Book Synopsis Identification of Two Interacting Quantitative Trait Loci Controlling for Condensed Tannin in Sorghum Grain and Grain Quality Analysis of a Sorghum Diverse Collection by : Wenwen Xiang
Download or read book Identification of Two Interacting Quantitative Trait Loci Controlling for Condensed Tannin in Sorghum Grain and Grain Quality Analysis of a Sorghum Diverse Collection written by Wenwen Xiang and published by . This book was released on 2009 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Tannin, a second metabolic product in sorghum, has been directly related to resistance to insects and birds. Tannin also impacts sorghum nutritional value. Previous studies have shown tannin content has a positive correlation with early season cold tolerance, an important agronomic trait. Sorghum contains condensed tannins in testa layer below the pericarp. The testa layer tannin is controlled by two complementary genes B1 and B2: tannins are present when both genes are dominant but absent when only one or none of these two is dominant. The purpose of this research is to identify and map QTLs associated with the presence of condensed tannins, analyze interaction of QTLs, and provide a potential path to dissect the more complex trait of early season cold tolerance in future studies. A population of 109 F6:7 recombinant inbred lines (RILs) developed from the cross of a high tannin sorghum Shan Qui Red (SQR) and non-tannin line Tx430 was used in the mapping study. Two QTLs related to condense tannin presence in testa layer were mapped to chromosome 2 and 4, respectively. Strong epistatic interaction of these two QTLs was detected. The two QTLs together with their interaction explained 74% of the phenotypic variation. Sorghum grain quality traits, including kernel size, kernel hardness, protein and starch content, are complex traits which are directly related to sorghum nutritional value and market value. Association mapping is a promising method for complex quantitative traits analysis and dissection in plant science. Sorghum grain quality trait association analysis research is purposed to analyze large amount of grain quality data based on a diversity panel. A sorghum bicolor panel of 300 lines including germplasm derived from sorghum conversion program and elite commercial lines were established and served as diversity population for the association study. Phenotypic data of grain quality traits were collected by single kernel characterization system (SKCS) and near infrared reflectance spectroscopy (NIRS). Data analysis proved high diversity within the SB panel. A correlation between tannin presence and kernel hardness was also observed. Quality traits showed high consistence across years and environments.
Download or read book Petunia written by Tom Gerats and published by Springer Science & Business Media. This book was released on 2008-12-11 with total page 451 pages. Available in PDF, EPUB and Kindle. Book excerpt: Petunia belongs to the family of the Solanaceae and as such is closely related to important crop species like tomato, potato, eggplant, pepper and tobacco. With around 35 species described it is one of the smaller genera and among those there are two groups of species that make up the majority of them: the purple flowered P.integrifolia group and the white flowered P.axillaris group. It is assumed that interspecific hybrids between members of these two groups have laid the foundation for the huge variation in cultivars as selected from the 1830’s onwards. Petunia thus has been a commercially important ornamental since the early days of horticulture. Despite that, Petunia was in use as a research model only parsimoniously until the late fifties of the last century. By then seed companies started to fund academic research, initially with the main aim to develop new color varieties. Besides a moment of glory around 1980 (being elected a promising model system, just prior to the Arabidopsis boom), Petunia has long been a system in the shadow. Up to the early eighties no more then five groups developed classical and biochemical genetics, almost exclusively on flower color genes. Then from the early eighties onward, interest has slowly been growing and nowadays some 20-25 academic groups around the world are using Petunia as their main model system for a variety of research purposes, while a number of smaller and larger companies are developing further new varieties. At present the system is gaining credibility for a number of reasons, a very important one being that it is now generally realized that only comparative biology will reveal the real roots of evolutionary development of processes like pollination syndromes, floral development, scent emission, seed survival strategies and the like. As a system to work with, Petunia combines advantages from several other model species: it is easy to grow, sets abundant seeds, while self- and cross pollination is easy; its lifecycle is four months from seed to seed; plants can be grown very densely, in 1 cm2 plugs and can be rescued easily upon flowering, which makes even huge selection plots easy to handle. Its flowers (and indeed leaves) are relatively large and thus obtaining biochemical samples is no problem. Moreover, transformation and regeneration from leaf disc or protoplast are long established and easy-to-perform procedures. On top of this easiness in culture, Petunia harbors an endogenous, very active transposable element system, which is being used to great advantage in both forward and reverse genetics screens. The virtues of Petunia as a model system have only partly been highlighted. In a first monograph, edited by K. Sink and published in 1984, the emphasis was mainly on taxonomy, morphology, classical and biochemical genetics, cytogenetics, physiology and a number of topical subjects. At that time, little molecular data was available. Taking into account that that first monograph will be offered electronically as a supplement in this upcoming edition, we would like to put the overall emphasis for the second edition on molecular developments and on comparative issues. To this end we propose the underneath set up, where chapters will be brief and topical. Each chapter will present the historical setting of its subject, the comparison with other systems (if available) and the unique progress as made in Petunia. We expect that the second edition of the Petunia monograph will draw a broad readership both in academia and industry and hope that it will contribute to a further expansion in research on this wonderful Solanaceae.
Book Synopsis Genomic Mapping for Grain Yield, Stay Green, and Grain Quality Traits in Sorghum by : Sivakumar Sukumaran
Download or read book Genomic Mapping for Grain Yield, Stay Green, and Grain Quality Traits in Sorghum written by Sivakumar Sukumaran and published by . This book was released on 2012 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Knowledge of the genetic bases of grain quality traits will complement plant breeding efforts to improve the end use value of sorghum (Sorghum bicolor (L.) Moench). The objective of the first experiment was to assess marker-trait associations for 10 grain quality traits through candidate gene association mapping on a diverse panel of 300 sorghum accessions. The 10 grain quality traits were measured using the single kernel characterization system (SKCS) and near-infrared reflectance spectroscopy (NIRS). The analysis of the accessions through 1,290 genome-wide single nucleotide polymorphisms (SNPs) separated the panel into five subpopulations that corresponded to three major sorghum races (durra, kafir, and caudatum), one intermediate race (guinea-caudatum), and one working group (zerazera/caudatum). Association analysis between 333 SNPs in candidate genes/loci and grain quality traits resulted in eight significant marker-trait associations. A SNP in starch synthase IIa (SSIIa) gene was associated with kernel hardness (KH) with a likelihood ratio-based R2 (R[subscript]L[subscript]R2) value of 0.08. SNPs in starch synthase (SSIIb) gene (R[subscript]L[subscript]R2 = 0.10) and loci pSB1120 (R[subscript]L[subscript]R2 = 0.09) was associated with starch content. Sorghum is a crop well adapted to the semi arid regions of the world and my harbor genes for drought tolerance. The objective of second experiment was to identify quantitative trait loci (QTLs) for yield potential and drought tolerance. From a cross between Tx436 (food grain type) and 00MN7645 (drought tolerant) 248 recombinant inbred lines (RILs) was developed. Multi-location trials were conducted in 8 environments to evaluate agronomic performance of the RILs under favorable and drought stress conditions. The 248 RILs and their parents were genotyped by genotyping-by-sequencing (GBS). A subset of 800 SNPs was used for linkage map construction and QTL detection. Composite interval mapping identified a major QTLs for grain yield in chromosome 8 and QTL for flowering time in chromosome 9 under favorable conditions. Three major QTLs were detected for grain yield in chromosomes 1, 6, and 8 and two flowering time QTLs on chromosome 1 under drought conditions. Six QTLs were identified for stay green: two on chromosome 4; one each on chromosome 5, 6, 7, and 10 under drought conditions.
Book Synopsis Genetics, Genomics and Breeding of Sorghum by : Yi-Hong Wang
Download or read book Genetics, Genomics and Breeding of Sorghum written by Yi-Hong Wang and published by CRC Press. This book was released on 2014-07-08 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sorghum is one of the hardiest crop plants in modern agriculture and also one of the most versatile. Its seeds provide calorie for food and feed, stalks for building and industrial materials and its juice for syrup. This book provides an in-depth review of the cutting-edge knowledge in sorghum genetics and its applications in sorghum breeding. Each chapter is authored by specialists in their fields to report the latest trends and findings. The book showcases the definitive value of sorghum as a model system to study the genetic basis of crop productivity and stress tolerance and will provide a foundation for future studies in sorghum genetics, genomics, and breeding.
Book Synopsis Sorghum Molecular Breeding by : R. Madhusudhana
Download or read book Sorghum Molecular Breeding written by R. Madhusudhana and published by Springer. This book was released on 2015-08-20 with total page 231 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an up-to-date overview of international research work on sorghum. Its comprehensive coverage of our current understanding of transgenic development in sorghum and the strategies that are being applied in molecular breeding make this book unique. Important areas such as genetic diversity, QTL mapping, heterosis prediction, genomic and bioinformatics resources, post-genome sequencing developments, molecular markers development using bioinformatics tools, genetic transformation and transgenic research are also addressed. The availability of the genome sequence along with other recent developments in sequencing and genotyping technologies has resulted in considerable advances in the area of sorghum genomics. These in turn have led to the generation of a large number of DNA-based markers and resulted in the identification and fine mapping of QTL associated with grain yield, its component traits, biotic and abiotic stress tolerance as well as grain quality traits in sorghum. Though a large volume of information has accumulated over the years, especially following the sequencing of the sorghum genome, until now it was not available in a single reference resource. This book fills that gap by documenting advances in the genomics and transgenic research in sorghum and presenting critical reviews and future prospects. “Sorghum Molecular Breeding” is an essential guide for students, researchers and managers who are involved in the area of molecular breeding and transgenic research in sorghum and plant biologists in general.
Book Synopsis Identification of Major Quantitative Trait Loci for Grain Quality Traits in Tropical Maize Recombinant Inbred Lines by : Haci-Murat Arpat
Download or read book Identification of Major Quantitative Trait Loci for Grain Quality Traits in Tropical Maize Recombinant Inbred Lines written by Haci-Murat Arpat and published by . This book was released on 1996 with total page 154 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Integrated Analysis of Phenology, Traits, and QTL in the Drought Tolerant Sorghum Genotypes BTx642 and RTx7000 by : Brock D. Weers
Download or read book Integrated Analysis of Phenology, Traits, and QTL in the Drought Tolerant Sorghum Genotypes BTx642 and RTx7000 written by Brock D. Weers and published by . This book was released on 2012 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: The growth and development of two sorghum drought tolerant genotypes BTx642 (post-flowering drought tolerant, "stay green") and RTx7000 (pre-flowering drought tolerant) were characterized and compared. Differences in phenology and the growth and development of leaves and stalks were identified that could contribute to variation in shoot biomass, grain yield and response to water deficit. An F12 recombinant inbred line (RIL) population derived from the two parents was genotyped using the Illumina Genome Analyzer II platform and the information used to generate a genetic map useful for analysis of quantitative trait loci (QTL). Seventy-two different traits were measured in the RIL population at anthesis and at grain maturity. Plants were grown in well-watered environments in greenhouse conditions and in field conditions near College Station, TX in 2008-2010. QTL mapping was used to analyze the genetic basis of trait variation in the population and to detect associations between traits. A total of 477 QTL were identified that in combination modulate leaf size (length, width, and area), shoot biomass accumulation (shoot, stalk, stem, leaf, and leaf sheath), panicle weight, root size and architecture (length, surface area, and volume, number of tips, forks and nodal roots, and root biomass), stalk and stem length, and flowering time. Six flowering time QTL were identified and variation in time to anthesis affected the expression of several other traits including leaf size and biomass accumulation. However, QTL infrequently had an impact on traits associated with different organs. The specificity observed is consistent with independent genetic control of traits associated with leaves, stems and roots. Nine QTL that modulated shoot biomass accumulation were detected that were not affected by flowering time. Of these, four shoot biomass QTL co-localized with leaf size traits. Eight QTL for panicle biomass were detected with two coincident with QTL for upper leaf size. A QTL for leaf width at anthesis was found to co-localize with a stay green locus.
Download or read book Sorghum written by Ignacio A. Ciampitti and published by John Wiley & Sons. This book was released on 2020-01-22 with total page 528 pages. Available in PDF, EPUB and Kindle. Book excerpt: Sorghum is among the top five cereals and one of the key crops in global food security efforts. Sorghum is a resilient crop under high-stress environments, ensuring productivity and access to food when other crops fail. Scientists see the potential of sorghum as a main staple food in a future challenged by climate change. The contributors provide a comprehensive review of sorghum knowledge. The discussion covers genetic improvements, development of new hybrids, biotechnology, and physiological modifications. Production topics include water and nutrient management, rotations, and pest control. Final end uses, sorghum as a bioenergy crop, markets, and the future of sorghum are presented. IN PRESS! This book is being published according to the “Just Published” model, with more chapters to be published online as they are completed.
Author :University of Guelph. Department of Plant Agriculture Publisher : ISBN 13 :9780494418086 Total Pages :101 pages Book Rating :4.4/5 (18 download)
Book Synopsis Environment-specific Quantitative Trait Loci for Grain Yeied in a Novel Recombinant Inbred Line Population by : University of Guelph. Department of Plant Agriculture
Download or read book Environment-specific Quantitative Trait Loci for Grain Yeied in a Novel Recombinant Inbred Line Population written by University of Guelph. Department of Plant Agriculture and published by . This book was released on 2008 with total page 101 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis QTLs for Energy Related Traits in a Sweet X Grain RIL Sorghum [sorghum Bicolor (l.) Moench] Population by : Terry Felderhoff
Download or read book QTLs for Energy Related Traits in a Sweet X Grain RIL Sorghum [sorghum Bicolor (l.) Moench] Population written by Terry Felderhoff and published by . This book was released on 2012 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: Recent initiatives for biofuel production have increased research and development of sweet sorghum. Currently, the initial major limitation to integrating sweet sorghum into existing production systems is the lack of sweet sorghum hybrids adapted to industrial production systems. Hybrid development is now underway, and the application of genetic markers can be used to define the genetic basis of sugar yield and its components, as well as reduce the time required to deliver new sweet sorghum hybrids to market. The purpose of this research was to further characterize the genetic components that influence sweet sorghum productivity, agronomics, and composition. Specifically, a grain x sweet sorghum recombinant inbred line (RIL) population developed for quantitative trait locus (QTL) analysis related to sugar production was evaluated for 24 phenotypic traits including brix, percent moisture, and biomass yield across four environments. The 185 F4 RILs were derived from the parents 'BTx3197' and 'Rio', which are pithy stalk grain and juicy stalk sweet sorghums respectively. Following screening, two genetic maps were constructed with 372 and 381 single nucleotide polymorphisms (SNPs) evaluated using an Illumina GoldenGate assay. Analysis of the data in QTL Cartographer revealed a major and previously reported QTL for soluble solids on chromosome 3, but in contrast to previous studies, this QTL co-localized with other QTLs that have a negative influence on biomass and seed production. Therefore, selection for this QTL may not be advantageous. Because only a few QTLs for percent moisture were found, the results indicated that the pithy stalk phenotype does not have a major effect on percent moisture as measured in this study. Thus, breeding for high or low moisture content will be more challenging than previously expected. The absence of dominance effects indicated that brix must be high in both parents to produce high brix in the hybrid.
Book Synopsis Breeding Sorghum for Diverse End Uses by : Aruna C
Download or read book Breeding Sorghum for Diverse End Uses written by Aruna C and published by Woodhead Publishing. This book was released on 2018-08-22 with total page 452 pages. Available in PDF, EPUB and Kindle. Book excerpt: Breeding Sorghum for Diverse End Uses is a comprehensive overview of all significant global efforts for the genetic improvement of sorghum, a major crop of many semi-arid nations that is suitable for a huge range of uses, from human food, to biofuels. Split into two main sections, the book initially reviews the genetic suitability of sorghum for breeding, also providing the history of the genetic improvement of the grain. Finally, other sections look at specific breeding programs that could be improved in a number of areas, including human food, animal feed and industrial usage. Readers in academics, research, plant genetics and sorghum development will find this resource of great value. In addition, it is essential reading for engineers who utilize sorghum for food, feed and industrial materials in industry. Provides information on key advances in the genetic makeup of sorghum Allows plant breeders to apply this research to effectively breed new strains of sorghum that are dependent on final usage goals Includes the latest findings in each section to orient researchers to plans for future genetic enhancement
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