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Computational Topology For Biomedical Image And Data Analysis
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Book Synopsis Computational Topology for Biomedical Image and Data Analysis by : Rodrigo Rojas Moraleda
Download or read book Computational Topology for Biomedical Image and Data Analysis written by Rodrigo Rojas Moraleda and published by CRC Press. This book was released on 2019-07-12 with total page 116 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an accessible yet rigorous introduction to topology and homology focused on the simplicial space. It presents a compact pipeline from the foundations of topology to biomedical applications. It will be of interest to medical physicists, computer scientists, and engineers, as well as undergraduate and graduate students interested in this topic. Features: Presents a practical guide to algebraic topology as well as persistence homology Contains application examples in the field of biomedicine, including the analysis of histological images and point cloud data
Book Synopsis Computational Topology for Data Analysis by : Tamal Krishna Dey
Download or read book Computational Topology for Data Analysis written by Tamal Krishna Dey and published by Cambridge University Press. This book was released on 2022-03-10 with total page 456 pages. Available in PDF, EPUB and Kindle. Book excerpt: Topological data analysis (TDA) has emerged recently as a viable tool for analyzing complex data, and the area has grown substantially both in its methodologies and applicability. Providing a computational and algorithmic foundation for techniques in TDA, this comprehensive, self-contained text introduces students and researchers in mathematics and computer science to the current state of the field. The book features a description of mathematical objects and constructs behind recent advances, the algorithms involved, computational considerations, as well as examples of topological structures or ideas that can be used in applications. It provides a thorough treatment of persistent homology together with various extensions – like zigzag persistence and multiparameter persistence – and their applications to different types of data, like point clouds, triangulations, or graph data. Other important topics covered include discrete Morse theory, the Mapper structure, optimal generating cycles, as well as recent advances in embedding TDA within machine learning frameworks.
Book Synopsis Interpretability of Machine Intelligence in Medical Image Computing, and Topological Data Analysis and Its Applications for Medical Data by : Mauricio Reyes
Download or read book Interpretability of Machine Intelligence in Medical Image Computing, and Topological Data Analysis and Its Applications for Medical Data written by Mauricio Reyes and published by Springer Nature. This book was released on 2021-09-21 with total page 138 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed joint proceedings of the 4th International Workshop on Interpretability of Machine Intelligence in Medical Image Computing, iMIMIC 2020, and the First International Workshop on Topological Data Analysis and Its Applications for Medical Data, TDA4MedicalData 2021, held on September 27, 2021, in conjunction with the 24th International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2021. The 7 full papers presented at iMIMIC 2021 and 5 full papers held at TDA4MedicalData 2021 were carefully reviewed and selected from 12 submissions each. The iMIMIC papers focus on introducing the challenges and opportunities related to the topic of interpretability of machine learning systems in the context of medical imaging and computer assisted intervention. TDA4MedicalData is focusing on using TDA techniques to enhance the performance, generalizability, efficiency, and explainability of the current methods applied to medical data.
Book Synopsis Computational Topology for Data Analysis by : Tamal Krishna Dey
Download or read book Computational Topology for Data Analysis written by Tamal Krishna Dey and published by Cambridge University Press. This book was released on 2022-03-10 with total page 455 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides a computational and algorithmic foundation for techniques in topological data analysis, with examples and exercises.
Book Synopsis Computer Vision for Biomedical Image Applications by : Yanxi Liu
Download or read book Computer Vision for Biomedical Image Applications written by Yanxi Liu and published by Springer Science & Business Media. This book was released on 2005-10-10 with total page 577 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the First International Workshop on Computer Vision for Biomedical Image Applications: Current Techniques and Future Trends, CVBIA 2005, held in Beijing, China, in October 2005 within the scope of ICCV 20.
Book Synopsis Topological Data Analysis for Genomics and Evolution by : Raúl Rabadán
Download or read book Topological Data Analysis for Genomics and Evolution written by Raúl Rabadán and published by Cambridge University Press. This book was released on 2019-10-31 with total page 521 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biology has entered the age of Big Data. The technical revolution has transformed the field, and extracting meaningful information from large biological data sets is now a central methodological challenge. Algebraic topology is a well-established branch of pure mathematics that studies qualitative descriptors of the shape of geometric objects. It aims to reduce questions to a comparison of algebraic invariants, such as numbers, which are typically easier to solve. Topological data analysis is a rapidly-developing subfield that leverages the tools of algebraic topology to provide robust multiscale analysis of data sets. This book introduces the central ideas and techniques of topological data analysis and its specific applications to biology, including the evolution of viruses, bacteria and humans, genomics of cancer and single cell characterization of developmental processes. Bridging two disciplines, the book is for researchers and graduate students in genomics and evolutionary biology alongside mathematicians interested in applied topology.
Book Synopsis Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics by : M. Jorge Cardoso
Download or read book Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics written by M. Jorge Cardoso and published by Springer. This book was released on 2017-09-06 with total page 262 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed joint proceedings of the First International Workshop on Graphs in Biomedical Image Analysis, GRAIL 2017, the 6th International Workshop on Mathematical Foundations of Computational Anatomy, MFCA 2017, and the Third International Workshop on Imaging Genetics, MICGen 2017, held in conjunction with the 20th International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2017, in Québec City, QC, Canada, in September 2017. The 7 full papers presented at GRAIL 2017, the 10 full papers presented at MFCA 2017, and the 5 full papers presented at MICGen 2017 were carefully reviewed and selected. The GRAIL papers cover a wide range of graph based medical image analysis methods and applications, including probabilistic graphical models, neuroimaging using graph representations, machine learning for diagnosis prediction, and shape modeling. The MFCA papers deal with theoretical developments in non-linear image and surface registration in the context of computational anatomy. The MICGen papers cover topics in the field of medical genetics, computational biology and medical imaging.
Author :Thomas Martin Deserno Publisher :Springer Science & Business Media ISBN 13 :3642158161 Total Pages :617 pages Book Rating :4.6/5 (421 download)
Book Synopsis Biomedical Image Processing by : Thomas Martin Deserno
Download or read book Biomedical Image Processing written by Thomas Martin Deserno and published by Springer Science & Business Media. This book was released on 2011-03-01 with total page 617 pages. Available in PDF, EPUB and Kindle. Book excerpt: In modern medicine, imaging is the most effective tool for diagnostics, treatment planning and therapy. Almost all modalities have went to directly digital acquisition techniques and processing of this image data have become an important option for health care in future. This book is written by a team of internationally recognized experts from all over the world. It provides a brief but complete overview on medical image processing and analysis highlighting recent advances that have been made in academics. Color figures are used extensively to illustrate the methods and help the reader to understand the complex topics.
Book Synopsis Computational Homology by : Tomasz Kaczynski
Download or read book Computational Homology written by Tomasz Kaczynski and published by Springer Science & Business Media. This book was released on 2006-04-18 with total page 488 pages. Available in PDF, EPUB and Kindle. Book excerpt: Homology is a powerful tool used by mathematicians to study the properties of spaces and maps that are insensitive to small perturbations. This book uses a computer to develop a combinatorial computational approach to the subject. The core of the book deals with homology theory and its computation. Following this is a section containing extensions to further developments in algebraic topology, applications to computational dynamics, and applications to image processing. Included are exercises and software that can be used to compute homology groups and maps. The book will appeal to researchers and graduate students in mathematics, computer science, engineering, and nonlinear dynamics.
Book Synopsis 3D Image Reconstruction for CT and PET by : Daniele Panetta
Download or read book 3D Image Reconstruction for CT and PET written by Daniele Panetta and published by CRC Press. This book was released on 2020-10-11 with total page 135 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is a practical guide to tomographic image reconstruction with projection data, with strong focus on Computed Tomography (CT) and Positron Emission Tomography (PET). Classic methods such as FBP, ART, SIRT, MLEM and OSEM are presented with modern and compact notation, with the main goal of guiding the reader from the comprehension of the mathematical background through a fast-route to real practice and computer implementation of the algorithms. Accompanied by example data sets, real ready-to-run Python toolsets and scripts and an overview the latest research in the field, this guide will be invaluable for graduate students and early-career researchers and scientists in medical physics and biomedical engineering who are beginners in the field of image reconstruction. A top-down guide from theory to practical implementation of PET and CT reconstruction methods, without sacrificing the rigor of mathematical background Accompanied by Python source code snippets, suggested exercises, and supplementary ready-to-run examples for readers to download from the CRC Press website Ideal for those willing to move their first steps on the real practice of image reconstruction, with modern scientific programming language and toolsets Daniele Panetta is a researcher at the Institute of Clinical Physiology of the Italian National Research Council (CNR-IFC) in Pisa. He earned his MSc degree in Physics in 2004 and specialisation diploma in Health Physics in 2008, both at the University of Pisa. From 2005 to 2007, he worked at the Department of Physics "E. Fermi" of the University of Pisa in the field of tomographic image reconstruction for small animal imaging micro-CT instrumentation. His current research at CNR-IFC has as its goal the identification of novel PET/CT imaging biomarkers for cardiovascular and metabolic diseases. In the field micro-CT imaging, his interests cover applications of three-dimensional morphometry of biosamples and scaffolds for regenerative medicine. He acts as reviewer for scientific journals in the field of Medical Imaging: Physics in Medicine and Biology, Medical Physics, Physica Medica, and others. Since 2012, he is adjunct professor in Medical Physics at the University of Pisa. Niccolò Camarlinghi is a researcher at the University of Pisa. He obtained his MSc in Physics in 2007 and his PhD in Applied Physics in 2012. He has been working in the field of Medical Physics since 2008 and his main research fields are medical image analysis and image reconstruction. He is involved in the development of clinical, pre-clinical PET and hadron therapy monitoring scanners. At the time of writing this book he was a lecturer at University of Pisa, teaching courses of life-sciences and medical physics laboratory. He regularly acts as a referee for the following journals: Medical Physics, Physics in Medicine and Biology, Transactions on Medical Imaging, Computers in Biology and Medicine, Physica Medica, EURASIP Journal on Image and Video Processing, Journal of Biomedical and Health Informatics.
Book Synopsis Medical Physics During the COVID-19 Pandemic by : Kwan Hoong Ng
Download or read book Medical Physics During the COVID-19 Pandemic written by Kwan Hoong Ng and published by CRC Press. This book was released on 2021-03-28 with total page 183 pages. Available in PDF, EPUB and Kindle. Book excerpt: The first book to cover the impact of COVID-19 on the field of medical physics Edited by two experts in the field, with chapter contributions from subject area specialists around the world Broad, global coverage, ranging from the impact on teaching, research, and publishing, with unique perspectives from journal editors and students and trainees
Book Synopsis Brain Network Analysis by : Moo K. Chung
Download or read book Brain Network Analysis written by Moo K. Chung and published by Cambridge University Press. This book was released on 2019-06-27 with total page 343 pages. Available in PDF, EPUB and Kindle. Book excerpt: This coherent mathematical and statistical approach aimed at graduate students incorporates regression and topology as well as graph theory.
Book Synopsis Big Data Analytics Strategies for the Smart Grid by : Carol L. Stimmel
Download or read book Big Data Analytics Strategies for the Smart Grid written by Carol L. Stimmel and published by CRC Press. This book was released on 2014-07-25 with total page 258 pages. Available in PDF, EPUB and Kindle. Book excerpt: By implementing a comprehensive data analytics program, utility companies can meet the continually evolving challenges of modern grids that are operationally efficient, while reconciling the demands of greenhouse gas legislation and establishing a meaningful return on investment from smart grid deployments. Readable and accessible, Big Data Analytics Strategies for the Smart Grid addresses the needs of applying big data technologies and approaches, including Big Data cybersecurity, to the critical infrastructure that makes up the electrical utility grid. It supplies industry stakeholders with an in-depth understanding of the engineering, business, and customer domains within the power delivery market. The book explores the unique needs of electrical utility grids, including operational technology, IT, storage, processing, and how to transform grid assets for the benefit of both the utility business and energy consumers. It not only provides specific examples that illustrate how analytics work and how they are best applied, but also describes how to avoid potential problems and pitfalls. Discussing security and data privacy, it explores the role of the utility in protecting their customers’ right to privacy while still engaging in forward-looking business practices. The book includes discussions of: SAS for asset management tools The AutoGrid approach to commercial analytics Space-Time Insight’s work at the California ISO (CAISO) This book is an ideal resource for mid- to upper-level utility executives who need to understand the business value of smart grid data analytics. It explains critical concepts in a manner that will better position executives to make the right decisions about building their analytics programs. At the same time, the book provides sufficient technical depth that it is useful for data analytics professionals who need to better understand the nuances of the engineering and business challenges unique to the utilities industry.
Book Synopsis Topology in Real-World Machine Learning and Data Analysis by : Kathryn Hess
Download or read book Topology in Real-World Machine Learning and Data Analysis written by Kathryn Hess and published by Frontiers Media SA. This book was released on 2022-11-07 with total page 229 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Shape Analysis in Medical Image Analysis by : Shuo Li
Download or read book Shape Analysis in Medical Image Analysis written by Shuo Li and published by Springer Science & Business Media. This book was released on 2014-01-28 with total page 441 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book contains thirteen contributions from invited experts of international recognition addressing important issues in shape analysis in medical image analysis, including techniques for image segmentation, registration, modelling and classification and applications in biology, as well as in cardiac, brain, spine, chest, lung and clinical practice. This volume treats topics such as for example, anatomic and functional shape representation and matching; shape-based medical image segmentation; shape registration; statistical shape analysis; shape deformation; shape-based abnormity detection; shape tracking and longitudinal shape analysis; machine learning for shape modeling and analysis; shape-based computer-aided-diagnosis; shape-based medical navigation; benchmark and validation of shape representation, analysis and modeling algorithms. This work will be of interest to researchers, students and manufacturers in the fields of artificial intelligence, bioengineering, biomechanics, computational mechanics, computational vision, computer sciences, human motion, mathematics, medical imaging, medicine, pattern recognition and physics.
Book Synopsis Artificial Intelligence in Medicine by : David Riaño
Download or read book Artificial Intelligence in Medicine written by David Riaño and published by Springer. This book was released on 2019-06-19 with total page 431 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 17th Conference on Artificial Intelligence in Medicine, AIME 2019, held in Poznan, Poland, in June 2019. The 22 revised full and 31 short papers presented were carefully reviewed and selected from 134 submissions. The papers are organized in the following topical sections: deep learning; simulation; knowledge representation; probabilistic models; behavior monitoring; clustering, natural language processing, and decision support; feature selection; image processing; general machine learning; and unsupervised learning.
Book Synopsis Interactive Knowledge Discovery and Data Mining in Biomedical Informatics by : Andreas Holzinger
Download or read book Interactive Knowledge Discovery and Data Mining in Biomedical Informatics written by Andreas Holzinger and published by Springer. This book was released on 2014-06-17 with total page 373 pages. Available in PDF, EPUB and Kindle. Book excerpt: One of the grand challenges in our digital world are the large, complex and often weakly structured data sets, and massive amounts of unstructured information. This “big data” challenge is most evident in biomedical informatics: the trend towards precision medicine has resulted in an explosion in the amount of generated biomedical data sets. Despite the fact that human experts are very good at pattern recognition in dimensions of = 3; most of the data is high-dimensional, which makes manual analysis often impossible and neither the medical doctor nor the biomedical researcher can memorize all these facts. A synergistic combination of methodologies and approaches of two fields offer ideal conditions towards unraveling these problems: Human–Computer Interaction (HCI) and Knowledge Discovery/Data Mining (KDD), with the goal of supporting human capabilities with machine learning./ppThis state-of-the-art survey is an output of the HCI-KDD expert network and features 19 carefully selected and reviewed papers related to seven hot and promising research areas: Area 1: Data Integration, Data Pre-processing and Data Mapping; Area 2: Data Mining Algorithms; Area 3: Graph-based Data Mining; Area 4: Entropy-Based Data Mining; Area 5: Topological Data Mining; Area 6 Data Visualization and Area 7: Privacy, Data Protection, Safety and Security.
