Mathematical Models for Biological Pattern Formation

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Publisher : Springer Science & Business Media
ISBN 13 : 1461301335
Total Pages : 327 pages
Book Rating : 4.4/5 (613 download)

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Book Synopsis Mathematical Models for Biological Pattern Formation by : Philip K. Maini

Download or read book Mathematical Models for Biological Pattern Formation written by Philip K. Maini and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 327 pages. Available in PDF, EPUB and Kindle. Book excerpt: This 121st IMA volume, entitled MATHEMATICAL MODELS FOR BIOLOGICAL PATTERN FORMATION is the first of a new series called FRONTIERS IN APPLICATION OF MATHEMATICS. The FRONTIERS volumes are motivated by IMA pro grams and workshops, but are specially planned and written to provide an entree to and assessment of exciting new areas for the application of mathematical tools and analysis. The emphasis in FRONTIERS volumes is on surveys, exposition and outlook, to attract more mathematicians and other scientists to the study of these areas and to focus efforts on the most important issues, rather than papers on the most recent research results aimed at an audience of specialists. The present volume of peer-reviewed papers grew out of the 1998-99 IMA program on "Mathematics in Biology," in particular the Fall 1998 em phasis on "Theoretical Problems in Developmental Biology and Immunol ogy." During that period there were two workshops on Pattern Formation and Morphogenesis, organized by Professors Murray, Maini and Othmer. James Murray was one of the principal organizers for the entire year pro gram. I am very grateful to James Murray for providing an introduction, and to Philip Maini and Hans Othmer for their excellent work in planning and preparing this first FRONTIERS volume. I also take this opportunity to thank the National Science Foundation, whose financial support of the IMA made the Mathematics in Biology pro gram possible.

Cellular Automaton Modeling of Biological Pattern Formation

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Publisher : Birkhäuser
ISBN 13 : 1489979808
Total Pages : 470 pages
Book Rating : 4.4/5 (899 download)

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Book Synopsis Cellular Automaton Modeling of Biological Pattern Formation by : Andreas Deutsch

Download or read book Cellular Automaton Modeling of Biological Pattern Formation written by Andreas Deutsch and published by Birkhäuser. This book was released on 2018-03-09 with total page 470 pages. Available in PDF, EPUB and Kindle. Book excerpt: This text explores the use of cellular automata in modeling pattern formation in biological systems. It describes several mathematical modeling approaches utilizing cellular automata that can be used to study the dynamics of interacting cell systems both in simulation and in practice. New in this edition are chapters covering cell migration, tissue development, and cancer dynamics, as well as updated references and new research topic suggestions that reflect the rapid development of the field. The book begins with an introduction to pattern-forming principles in biology and the various mathematical modeling techniques that can be used to analyze them. Cellular automaton models are then discussed in detail for different types of cellular processes and interactions, including random movement, cell migration, adhesive cell interaction, alignment and cellular swarming, growth processes, pigment cell pattern formation, tissue development, tumor growth and invasion, and Turing-type patterns and excitable media. In the final chapter, the authors critically discuss possibilities and limitations of the cellular automaton approach in modeling various biological applications, along with future research directions. Suggestions for research projects are provided throughout the book to encourage additional engagement with the material, and an accompanying simulator is available for readers to perform their own simulations on several of the models covered in the text. QR codes are included within the text for easy access to the simulator. With its accessible presentation and interdisciplinary approach, Cellular Automaton Modeling of Biological Pattern Formation is suitable for graduate and advanced undergraduate students in mathematical biology, biological modeling, and biological computing. It will also be a valuable resource for researchers and practitioners in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science. PRAISE FOR THE FIRST EDITION “An ideal guide for someone with a mathematical or physical background to start exploring biological modelling. Importantly, it will also serve as an excellent guide for experienced modellers to innovate and improve their methodologies for analysing simulation results.” —Mathematical Reviews

Models of Biological Pattern Formation

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Publisher :
ISBN 13 :
Total Pages : 252 pages
Book Rating : 4.:/5 (318 download)

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Book Synopsis Models of Biological Pattern Formation by : Hans Meinhardt

Download or read book Models of Biological Pattern Formation written by Hans Meinhardt and published by . This book was released on 1982 with total page 252 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Morphogenesis and Pattern Formation in Biological Systems

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Publisher : Springer Science & Business Media
ISBN 13 : 4431659587
Total Pages : 391 pages
Book Rating : 4.4/5 (316 download)

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Book Synopsis Morphogenesis and Pattern Formation in Biological Systems by : T. Sekimura

Download or read book Morphogenesis and Pattern Formation in Biological Systems written by T. Sekimura and published by Springer Science & Business Media. This book was released on 2013-11-11 with total page 391 pages. Available in PDF, EPUB and Kindle. Book excerpt: A central goal of biology is to decode the mechanisms that underlie the processes of morphogenesis and pattern formation. Concerned with the analysis of those phenomena, this book integrates experimental and theoretical aspects of biology for the construction and investigation of models of complex processes. It offers an interdisciplinary approach to the pattern formation problems and provides a scope of forthcoming integrated biology including experiments and theories.

Spatial Dynamics and Pattern Formation in Biological Populations

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Publisher : Chapman & Hall/CRC
ISBN 13 : 9781000334241
Total Pages : 0 pages
Book Rating : 4.3/5 (342 download)

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Book Synopsis Spatial Dynamics and Pattern Formation in Biological Populations by : Ranjit Kumar Upadhyay

Download or read book Spatial Dynamics and Pattern Formation in Biological Populations written by Ranjit Kumar Upadhyay and published by Chapman & Hall/CRC. This book was released on 2021 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book provides an introduction to deterministic (and some stochastic) modeling of spatiotemporal phenomena in ecology, epidemiology, and neural systems. A survey of the classical models in the fields with up to date applications is given. The book begins with detailed description of how spatial dynamics/diffusive processes influence the dynamics of biological populations. These processes play a key role in understanding the outbreak and spread of pandemics which help us in designing the control strategies from the public health perspective. A brief discussion on the functional mechanism of the brain (single neuron models and network level) with classical models of neuronal dynamics in space and time is given. Relevant phenomena and existing modeling approaches in ecology, epidemiology and neuroscience are introduced, which provide examples of pattern formation in these models. The analysis of patterns enables us to study the dynamics of macroscopic and microscopic behaviour of underlying systems and travelling wave type patterns observed in dispersive systems. Moving on to virus dynamics, authors present a detailed analysis of different types models of infectious diseases including two models for influenza, five models for Ebola virus and seven models for Zika virus with diffusion and time delay. A Chapter is devoted for the study of Brain Dynamics (Neural systems in space and time). Significant advances made in modeling the reaction-diffusion systems are presented and spatiotemporal patterning in the systems is reviewed. Development of appropriate mathematical models and detailed analysis (such as linear stability, weakly nonlinear analysis, bifurcation analysis, control theory, numerical simulation) are presented. Key Features Covers the fundamental concepts and mathematical skills required to analyse reaction-diffusion models for biological populations. Concepts are introduced in such a way that readers with a basic knowledge of differential equations and numerical methods can understand the analysis. The results are also illustrated with figures. Focuses on mathematical modeling and numerical simulations using basic conceptual and classic models of population dynamics, Virus and Brain dynamics. Covers wide range of models using spatial and non-spatial approaches. Covers single, two and multispecies reaction-diffusion models from ecology and models from bio-chemistry. Models are analysed for stability of equilibrium points, Turing instability, Hopf bifurcation and pattern formations. Uses Mathematica for problem solving and MATLAB for pattern formations. Contains solved Examples and Problems in Exercises. The Book is suitable for advanced undergraduate, graduate and research students. For those who are working in the above areas, it provides information from most of the recent works. The text presents all the fundamental concepts and mathematical skills needed to build models and perform analyses.

Directions In Condensed Matter Physics: Memorial Volume In Honor Of Shang-keng Ma

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Publisher : World Scientific
ISBN 13 : 9814513601
Total Pages : 270 pages
Book Rating : 4.8/5 (145 download)

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Book Synopsis Directions In Condensed Matter Physics: Memorial Volume In Honor Of Shang-keng Ma by : Geoffrey Grinstein

Download or read book Directions In Condensed Matter Physics: Memorial Volume In Honor Of Shang-keng Ma written by Geoffrey Grinstein and published by World Scientific. This book was released on 1986-08-01 with total page 270 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume collects several in-depth articles giving lucid discussions on new developments in statistical and condensed matter physics. Many, though not all, contributors had been in touch with the late S-K Ma. Written by some of the world's experts and originators of new ideas in the field, this book is a must for all researchers in theoretical physics. Most of the articles should be accessible to diligent graduate students and experienced readers will gain from the wealth of materials contained herein.

Neural Fields

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Publisher : Springer
ISBN 13 : 3642545939
Total Pages : 488 pages
Book Rating : 4.6/5 (425 download)

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Book Synopsis Neural Fields by : Stephen Coombes

Download or read book Neural Fields written by Stephen Coombes and published by Springer. This book was released on 2014-06-17 with total page 488 pages. Available in PDF, EPUB and Kindle. Book excerpt: Neural field theory has a long-standing tradition in the mathematical and computational neurosciences. Beginning almost 50 years ago with seminal work by Griffiths and culminating in the 1970ties with the models of Wilson and Cowan, Nunez and Amari, this important research area experienced a renaissance during the 1990ties by the groups of Ermentrout, Robinson, Bressloff, Wright and Haken. Since then, much progress has been made in both, the development of mathematical and numerical techniques and in physiological refinement und understanding. In contrast to large-scale neural network models described by huge connectivity matrices that are computationally expensive in numerical simulations, neural field models described by connectivity kernels allow for analytical treatment by means of methods from functional analysis. Thus, a number of rigorous results on the existence of bump and wave solutions or on inverse kernel construction problems are nowadays available. Moreover, neural fields provide an important interface for the coupling of neural activity to experimentally observable data, such as the electroencephalogram (EEG) or functional magnetic resonance imaging (fMRI). And finally, neural fields over rather abstract feature spaces, also called dynamic fields, found successful applications in the cognitive sciences and in robotics. Up to now, research results in neural field theory have been disseminated across a number of distinct journals from mathematics, computational neuroscience, biophysics, cognitive science and others. There is no comprehensive collection of results or reviews available yet. With our proposed book Neural Field Theory, we aim at filling this gap in the market. We received consent from some of the leading scientists in the field, who are willing to write contributions for the book, among them are two of the founding-fathers of neural field theory: Shun-ichi Amari and Jack Cowan.

Pattern Formation In The Physical And Biological Sciences

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Publisher : CRC Press
ISBN 13 : 042996191X
Total Pages : 459 pages
Book Rating : 4.4/5 (299 download)

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Book Synopsis Pattern Formation In The Physical And Biological Sciences by : H. Frederick Nijhout

Download or read book Pattern Formation In The Physical And Biological Sciences written by H. Frederick Nijhout and published by CRC Press. This book was released on 2018-02-19 with total page 459 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Lecture Notes Volume represents the first time any of the summer school lectures have been collected and published on a discrete subject rather than grouping all of a season's lectures together. This volume provides a broad survey of current thought on the problem of pattern formation. Spanning six years of summer school lectures, it includes articles which examine the origin and evolution of spatial patterns in physio-chemical and biological systems from a great diversity of theoretical and mechanistic perspectives. In addition, most of these pieces have been updated by their authors and three articles never previously published have been added.

Parabolic Equations in Biology

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Publisher : Springer
ISBN 13 : 331919500X
Total Pages : 204 pages
Book Rating : 4.3/5 (191 download)

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Book Synopsis Parabolic Equations in Biology by : Benoît Perthame

Download or read book Parabolic Equations in Biology written by Benoît Perthame and published by Springer. This book was released on 2015-09-09 with total page 204 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents several fundamental questions in mathematical biology such as Turing instability, pattern formation, reaction-diffusion systems, invasion waves and Fokker-Planck equations. These are classical modeling tools for mathematical biology with applications to ecology and population dynamics, the neurosciences, enzymatic reactions, chemotaxis, invasion waves etc. The book presents these aspects from a mathematical perspective, with the aim of identifying those qualitative properties of the models that are relevant for biological applications. To do so, it uncovers the mechanisms at work behind Turing instability, pattern formation and invasion waves. This involves several mathematical tools, such as stability and instability analysis, blow-up in finite time, asymptotic methods and relative entropy properties. Given the content presented, the book is well suited as a textbook for master-level coursework.

Mathematical Biology II

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Publisher : Springer Science & Business Media
ISBN 13 : 0387952284
Total Pages : 834 pages
Book Rating : 4.3/5 (879 download)

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Book Synopsis Mathematical Biology II by : James D. Murray

Download or read book Mathematical Biology II written by James D. Murray and published by Springer Science & Business Media. This book was released on 2011-02-15 with total page 834 pages. Available in PDF, EPUB and Kindle. Book excerpt: This richly illustrated third edition provides a thorough training in practical mathematical biology and shows how exciting mathematical challenges can arise from a genuinely interdisciplinary involvement with the biosciences. It has been extensively updated and extended to cover much of the growth of mathematical biology. From the reviews: ""This book, a classical text in mathematical biology, cleverly combines mathematical tools with subject area sciences."--SHORT BOOK REVIEWS

Pattern Formations and Oscillatory Phenomena

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Publisher : Elsevier Inc. Chapters
ISBN 13 : 0128061561
Total Pages : 75 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Pattern Formations and Oscillatory Phenomena by : Shuichi Kinoshita

Download or read book Pattern Formations and Oscillatory Phenomena written by Shuichi Kinoshita and published by Elsevier Inc. Chapters. This book was released on 2013-05-09 with total page 75 pages. Available in PDF, EPUB and Kindle. Book excerpt: We present examples of familiar phenomena found in nonequilibrium systems, including oscillatory phenomena, order-formation processes, and pattern formation. In particular, we introduce commonly used mathematical methods to analyze their characteristics. First, we present oscillations described by the Lotka–Volterra and van der Pol equations, the Brusselator, the Oregonator, and relaxation oscillations as examples of oscillatory phenomena. Second, we investigate the order-formation process in colloidal crystals and present an experimental observation of 2D array formation. Third, we demonstrate pattern formation in crystals on the basis of the Mullins–Sekerka instability, and in chemical and biological systems on the basis of the Turing instability. In particular, we describe the optical properties and development of sophisticated structural patterns that directly interact with light. Finally, we briefly describe a theoretical phase-transition analogy that might clarify the concept of order formation in nonequilibrium systems.

Numerical Methods and Advanced Simulation in Biomechanics and Biological Processes

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Publisher : Academic Press
ISBN 13 : 0128117192
Total Pages : 462 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Numerical Methods and Advanced Simulation in Biomechanics and Biological Processes by : Miguel Cerrolaza

Download or read book Numerical Methods and Advanced Simulation in Biomechanics and Biological Processes written by Miguel Cerrolaza and published by Academic Press. This book was released on 2017-12-28 with total page 462 pages. Available in PDF, EPUB and Kindle. Book excerpt: Numerical Methods and Advanced Simulation in Biomechanics and Biological Processes covers new and exciting modeling methods to help bioengineers tackle problems for which the Finite Element Method is not appropriate. The book covers a wide range of important subjects in the field of numerical methods applied to biomechanics, including bone biomechanics, tissue and cell mechanics, 3D printing, computer assisted surgery and fluid dynamics. Modeling strategies, technology and approaches are continuously evolving as the knowledge of biological processes increases. Both theory and applications are covered, making this an ideal book for researchers, students and R&D professionals. - Provides non-conventional analysis methods for modeling - Covers the Discrete Element Method (DEM), Particle Methods (PM), MessLess and MeshFree Methods (MLMF), Agent-Based Methods (ABM), Lattice-Boltzmann Methods (LBM) and Boundary Integral Methods (BIM) - Includes contributions from several world renowned experts in their fields - Compares pros and cons of each method to help you decide which method is most applicable to solving specific problems

Mathematical Biology

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Publisher : Springer Science & Business Media
ISBN 13 : 3662085429
Total Pages : 783 pages
Book Rating : 4.6/5 (62 download)

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Book Synopsis Mathematical Biology by : James D. Murray

Download or read book Mathematical Biology written by James D. Murray and published by Springer Science & Business Media. This book was released on 2013-06-29 with total page 783 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematics has always benefited from its involvement with developing sciences. Each successive interaction revitalises and enhances the field. Biomedical science is clearly the premier science of the foreseeable future. For the continuing health of their subject mathematicians must become involved with biology. With the example of how mathematics has benefited from and influenced physics, it is clear that if mathematicians do not become involved in the biosciences they will simply not be a part of what are likely to be the most important and exciting scientific discoveries of all time. Mathematical biology is a fast growing, well recognised, albeit not clearly defined, subject and is, to my mind, the most exciting modern application of mathematics. The increasing use of mathematics in biology is inevitable as biol ogy becomes more quantitative. The complexity of the biological sciences makes interdisciplinary involvement essential. For the mathematician, biology opens up new and exciting branches while for the biologist mathematical modelling offers another research tool commmensurate with a new powerful laboratory technique but only if used appropriately and its limitations recognised. However, the use of esoteric mathematics arrogantly applied to biological problems by mathemati cians who know little about the real biology, together with unsubstantiated claims as to how important such theories are, does little to promote the interdisciplinary involvement which is so essential. Mathematical biology research, to be useful and interesting, must be relevant biologically.

The Algorithmic Beauty of Sea Shells

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Publisher : Springer Science & Business Media
ISBN 13 : 3662052911
Total Pages : 247 pages
Book Rating : 4.6/5 (62 download)

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Book Synopsis The Algorithmic Beauty of Sea Shells by : Hans Meinhardt

Download or read book The Algorithmic Beauty of Sea Shells written by Hans Meinhardt and published by Springer Science & Business Media. This book was released on 2013-04-17 with total page 247 pages. Available in PDF, EPUB and Kindle. Book excerpt: The fascinating patterns on the shells of tropical sea snails are not only compellingly beautiful but also tell a tale of biological development. The decorative patterns are records of their own genesis, which follows laws such as those of dune formation or the spread of a flu epidemic. Hans Meinhardt has analyzed the dynamical processes that form these patterns and has retraced them in computer simulations. His book is exciting not only for the astonishing scientific knowledge it reveals but also for its fascinating pictures. An accompanying CD-ROM with the corresponding algorithms allows the reader to simulate the natural pattern formation and growth processes.

Pattern Formation

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Publisher : Cambridge University Press
ISBN 13 : 9780521817509
Total Pages : 440 pages
Book Rating : 4.8/5 (175 download)

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Book Synopsis Pattern Formation by : Rebecca B. Hoyle

Download or read book Pattern Formation written by Rebecca B. Hoyle and published by Cambridge University Press. This book was released on 2006-03-17 with total page 440 pages. Available in PDF, EPUB and Kindle. Book excerpt: Fully illustrated mathematical guide to pattern formation. Includes instructive exercises and examples.

Dynamic Models in Biology

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Publisher : Princeton University Press
ISBN 13 : 1400840961
Total Pages : 352 pages
Book Rating : 4.4/5 (8 download)

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Book Synopsis Dynamic Models in Biology by : Stephen P. Ellner

Download or read book Dynamic Models in Biology written by Stephen P. Ellner and published by Princeton University Press. This book was released on 2011-09-19 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt: From controlling disease outbreaks to predicting heart attacks, dynamic models are increasingly crucial for understanding biological processes. Many universities are starting undergraduate programs in computational biology to introduce students to this rapidly growing field. In Dynamic Models in Biology, the first text on dynamic models specifically written for undergraduate students in the biological sciences, ecologist Stephen Ellner and mathematician John Guckenheimer teach students how to understand, build, and use dynamic models in biology. Developed from a course taught by Ellner and Guckenheimer at Cornell University, the book is organized around biological applications, with mathematics and computing developed through case studies at the molecular, cellular, and population levels. The authors cover both simple analytic models--the sort usually found in mathematical biology texts--and the complex computational models now used by both biologists and mathematicians. Linked to a Web site with computer-lab materials and exercises, Dynamic Models in Biology is a major new introduction to dynamic models for students in the biological sciences, mathematics, and engineering.

Pattern Formation and Dynamics in Nonequilibrium Systems

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Publisher : Cambridge University Press
ISBN 13 : 0521770505
Total Pages : 547 pages
Book Rating : 4.5/5 (217 download)

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Book Synopsis Pattern Formation and Dynamics in Nonequilibrium Systems by : Michael Cross

Download or read book Pattern Formation and Dynamics in Nonequilibrium Systems written by Michael Cross and published by Cambridge University Press. This book was released on 2009-07-16 with total page 547 pages. Available in PDF, EPUB and Kindle. Book excerpt: An account of how complex patterns form in sustained nonequilibrium systems; for graduate students in biology, chemistry, engineering, mathematics, and physics.