An Introduction To Resting State Fmri Functional Connectivity

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Introduction to Resting State fMRI Functional Connectivity

Author : Janine Bijsterbosch
Publisher : Oxford University Press
ISBN 13 : 0192535757
Total Pages : 287 pages
Book Rating : 4.1/5 (925 download)

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Book Synopsis Introduction to Resting State fMRI Functional Connectivity by : Janine Bijsterbosch

Download or read book Introduction to Resting State fMRI Functional Connectivity written by Janine Bijsterbosch and published by Oxford University Press. This book was released on 2017-06-15 with total page 287 pages. Available in PDF, EPUB and Kindle. Book excerpt: Spontaneous 'resting-state' fluctuations in neuronal activity offer insights into the inherent organisation of the human brain, and may provide markers for diagnosis and treatment of mental disorders. Resting state functional magnetic resonance imaging (fMRI) can be used to investigate intrinsic functional connectivity networks, which are identified based on similarities in the signal measured from different regions. From data acquisition to results interpretation, An Introduction to Resting State fMRI Functional Connectivity discusses a wide range of approaches without expecting previous knowledge of the reader, making it truly accessible to readers from a broad range of backgrounds. Supplemented with online examples to enable the reader to obtain hands-on experience working with data, the text also provides details to enhance learning for those already experienced in the field. The Oxford Neuroimaging Primers are written for new researchers or advanced undergraduates in neuroimaging to provide a thorough understanding of the ways in which neuroimaging data can be analysed and interpreted. Aimed at students without a background in mathematics or physics, this book is also important reading for those familiar with task fMRI but new to the field of resting state fMRI.

An Introduction to Resting State FMRI Functional Connectivity

Author : Janine Bijsterbosch
Publisher : Oxford University Press
ISBN 13 : 0198808224
Total Pages : 157 pages
Book Rating : 4.1/5 (988 download)

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Book Synopsis An Introduction to Resting State FMRI Functional Connectivity by : Janine Bijsterbosch

Download or read book An Introduction to Resting State FMRI Functional Connectivity written by Janine Bijsterbosch and published by Oxford University Press. This book was released on 2017 with total page 157 pages. Available in PDF, EPUB and Kindle. Book excerpt: For those new to the field of resting state fMRI, the large variety of approaches to functional connectivity analysis is highly confusing. This primer provides an introduction to the concepts and analysis decisions that need to be made at every step of the processing pipeline, starting from data acquisition through to interpretation of findings.

Origins of the Resting-State fMRI Signal

Author : Jean Chen
Publisher : Frontiers Media SA
ISBN 13 : 2889662853
Total Pages : 188 pages
Book Rating : 4.8/5 (896 download)

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Book Synopsis Origins of the Resting-State fMRI Signal by : Jean Chen

Download or read book Origins of the Resting-State fMRI Signal written by Jean Chen and published by Frontiers Media SA. This book was released on 2020-12-28 with total page 188 pages. Available in PDF, EPUB and Kindle. Book excerpt: This eBook is a collection of articles from a Frontiers Research Topic. Frontiers Research Topics are very popular trademarks of the Frontiers Journals Series: they are collections of at least ten articles, all centered on a particular subject. With their unique mix of varied contributions from Original Research to Review Articles, Frontiers Research Topics unify the most influential researchers, the latest key findings and historical advances in a hot research area! Find out more on how to host your own Frontiers Research Topic or contribute to one as an author by contacting the Frontiers Editorial Office: frontiersin.org/about/contact.

Introduction to Neuroimaging Analysis

Author : Mark Jenkinson
Publisher : Oxford University Press
ISBN 13 : 0198816308
Total Pages : 277 pages
Book Rating : 4.1/5 (988 download)

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Book Synopsis Introduction to Neuroimaging Analysis by : Mark Jenkinson

Download or read book Introduction to Neuroimaging Analysis written by Mark Jenkinson and published by Oxford University Press. This book was released on 2018 with total page 277 pages. Available in PDF, EPUB and Kindle. Book excerpt: This accessible primer gives an introduction to the wide array of MRI-based neuroimaging methods that are used in research. It provides an overview of the fundamentals of what different MRI modalities measure, what artifacts commonly occur, the essentials of the analysis, and common 'pipelines'.

Handbook of functional connectivity Magnetic Resonance Imaging methods in CONN

Author : Alfonso Nieto-Castanon
Publisher : Hilbert Press
ISBN 13 : 0578644002
Total Pages : 113 pages
Book Rating : 4.5/5 (786 download)

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Book Synopsis Handbook of functional connectivity Magnetic Resonance Imaging methods in CONN by : Alfonso Nieto-Castanon

Download or read book Handbook of functional connectivity Magnetic Resonance Imaging methods in CONN written by Alfonso Nieto-Castanon and published by Hilbert Press. This book was released on 2020-01-31 with total page 113 pages. Available in PDF, EPUB and Kindle. Book excerpt: This handbook describes methods for processing and analyzing functional connectivity Magnetic Resonance Imaging (fcMRI) data using the CONN toolbox, a popular freely-available functional connectivity analysis software. Content description [excerpt from introduction] The first section (fMRI minimal preprocessing pipeline) describes standard and advanced preprocessing steps in fcMRI. These steps are aimed at correcting or minimizing the influence of well-known factors affecting the quality of functional and anatomical MRI data, including effects arising from subject motion within the scanner, temporal and spatial image distortions due to the sequential nature of the scanning acquisition protocol, and inhomogeneities in the scanner magnetic field, as well as anatomical differences among subjects. Even after these conventional preprocessing steps, the measured blood-oxygen-level-dependent (BOLD) signal often still contains a considerable amount of noise from a combination of physiological effects, outliers, and residual subject-motion factors. If unaccounted for, these factors would introduce very strong and noticeable biases in all functional connectivity measures. The second section (fMRI denoising pipeline) describes standard and advanced denoising procedures in CONN that are used to characterize and remove the effect of these residual non-neural noise sources. Functional connectivity Magnetic Resonance Imaging studies attempt to quantify the level of functional integration across different brain areas. The third section (functional connectivity measures) describes a representative set of functional connectivity measures available in CONN, each focusing on different indicators of functional integration, including seed-based connectivity measures, ROI-to-ROI measures, graph theoretical approaches, network-based measures, and dynamic connectivity measures. Second-level analyses allow researchers to make inferences about properties of groups or populations, by generalizing from the observations of only a subset of subjects in a study. The fourth section (General Linear Model) describes the mathematics behind the General Linear Model (GLM), the approach used in CONN for all second-level analyses of functional connectivity measures. The description includes GLM model definition, parameter estimation, and hypothesis testing framework, as well as several practical examples and general guidelines aimed at helping researchers use this method to answer their specific research questions. The last section (cluster-level inferences) details several approaches implemented in CONN that allow researchers to make meaningful inferences from their second-level analysis results while providing appropriate family-wise error control (FWEC), whether in the context of voxel-based measures, such as when studying properties of seed-based maps across multiple subjects, or in the context of ROI-to-ROI measures, such as when studying properties of ROI-to-ROI connectivity matrices across multiple subjects.

Pattern Analysis of the Human Connectome

Author : Dewen Hu
Publisher : Springer
ISBN 13 : 9789813295254
Total Pages : 0 pages
Book Rating : 4.2/5 (952 download)

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Book Synopsis Pattern Analysis of the Human Connectome by : Dewen Hu

Download or read book Pattern Analysis of the Human Connectome written by Dewen Hu and published by Springer. This book was released on 2020-11-20 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents recent advances in pattern analysis of the human connectome. The human connectome, measured by magnetic resonance imaging at the macroscale, provides a comprehensive description of how brain regions are connected. Based on machine learning methods, multiviarate pattern analysis can directly decode psychological or cognitive states from brain connectivity patterns. Although there are a number of works with chapters on conventional human connectome encoding (brain-mapping), there are few resources on human connectome decoding (brain-reading). Focusing mainly on advances made over the past decade in the field of manifold learning, sparse coding, multi-task learning, and deep learning of the human connectome and applications, this book helps students and researchers gain an overall picture of pattern analysis of the human connectome. It also offers valuable insights for clinicians involved in the clinical diagnosis and treatment evaluation of neuropsychiatric disorders.

Handbook of Functional MRI Data Analysis

Author : Russell A. Poldrack
Publisher : Cambridge University Press
ISBN 13 : 9781009481168
Total Pages : 0 pages
Book Rating : 4.4/5 (811 download)

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Book Synopsis Handbook of Functional MRI Data Analysis by : Russell A. Poldrack

Download or read book Handbook of Functional MRI Data Analysis written by Russell A. Poldrack and published by Cambridge University Press. This book was released on 2024-02-08 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging brain function. Handbook for Functional MRI Data Analysis provides a comprehensive and practical introduction to the methods used for fMRI data analysis. Using minimal jargon, this book explains the concepts behind processing fMRI data, focusing on the techniques that are most commonly used in the field. This book provides background about the methods employed by common data analysis packages including FSL, SPM, and AFNI. Some of the newest cutting-edge techniques, including pattern classification analysis, connectivity modeling, and resting state network analysis, are also discussed. Readers of this book, whether newcomers to the field or experienced researchers, will obtain a deep and effective knowledge of how to employ fMRI analysis to ask scientific questions and become more sophisticated users of fMRI analysis software.

The Connections Between Language and Reading Disabilities

Author : Hugh W. Catts
Publisher : Psychology Press
ISBN 13 : 1135611750
Total Pages : 213 pages
Book Rating : 4.1/5 (356 download)

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Book Synopsis The Connections Between Language and Reading Disabilities by : Hugh W. Catts

Download or read book The Connections Between Language and Reading Disabilities written by Hugh W. Catts and published by Psychology Press. This book was released on 2005-01-15 with total page 213 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is an edited book based on papers presented at a 2003 invitee-only conference under the sponsorship of the Merrill Advanced Studies Center of the University of Kansas. The purpose of the gathering was to discuss theoretical issues and research findi

Brain Connectivity in Autism

Author : Rajesh K. Kana
Publisher : Frontiers E-books
ISBN 13 : 2889192822
Total Pages : 265 pages
Book Rating : 4.8/5 (891 download)

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Book Synopsis Brain Connectivity in Autism by : Rajesh K. Kana

Download or read book Brain Connectivity in Autism written by Rajesh K. Kana and published by Frontiers E-books. This book was released on 2014-09-23 with total page 265 pages. Available in PDF, EPUB and Kindle. Book excerpt: The brain's ability to process information crucially relies on connectivity. Understanding how the brain processes complex information and how such abilities are disrupted in individuals with neuropsychological disorders will require an improved understanding of brain connectivity. Autism is an intriguingly complex neurodevelopmental disorder with multidimensional symptoms and cognitive characteristics. A biological origin for autism spectrum disorders (ASD) had been proposed even in the earliest published accounts (Kanner, 1943; Asperger, 1944). Despite decades of research, a focal neurobiological marker for autism has been elusive. Nevertheless, disruptions in interregional and functional and anatomical connectivity have been a hallmark of neural functioning in ASD. Theoretical accounts of connectivity perceive ASD as a cognitive and neurobiological disorder associated with altered functioning of integrative circuitry. Neuroimaging studies have reported disruptions in functional connectivity (synchronization of activated brain areas) during cognitive tasks and during task-free resting states. While these insights are valuable, they do not address the time-lagged causality and directionality of such correlations. Despite the general promise of the connectivity account of ASD, inconsistencies and methodological differences among studies call for more thorough investigations. A comprehensive neurological account of ASD should incorporate functional, effective, and anatomical connectivity measures and test the diagnostic utility of such measures. In addition, questions pertaining to how cognitive and behavioral intervention can target connection abnormalities in ASD should be addressed. This research topic of the Frontiers in Human Neuroscience addresses “Brain Connectivity in Autism” primarily from cognitive neuroscience and neuroimaging perspectives.

Neuroscience in the 21st Century

Author : Donald W. Pfaff
Publisher : Springer
ISBN 13 : 9781493934737
Total Pages : 0 pages
Book Rating : 4.9/5 (347 download)

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Book Synopsis Neuroscience in the 21st Century by : Donald W. Pfaff

Download or read book Neuroscience in the 21st Century written by Donald W. Pfaff and published by Springer. This book was released on 2016-10-27 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Edited and authored by a wealth of international experts in neuroscience and related disciplines, this key new resource aims to offer medical students and graduate researchers around the world a comprehensive introduction and overview of modern neuroscience. Neuroscience research is certain to prove a vital element in combating mental illness in its various incarnations, a strategic battleground in the future of medicine, as the prevalence of mental disorders is becoming better understood each year. Hundreds of millions of people worldwide are affected by mental, behavioral, neurological and substance use disorders. The World Health Organization estimated in 2002 that 154 million people globally suffer from depression and 25 million people from schizophrenia; 91 million people are affected by alcohol use disorders and 15 million by drug use disorders. A more recent WHO report shows that 50 million people suffer from epilepsy and 24 million from Alzheimer’s and other dementias. Because neuroscience takes the etiology of disease—the complex interplay between biological, psychological, and sociocultural factors—as its object of inquiry, it is increasingly valuable in understanding an array of medical conditions. A recent report by the United States’ Surgeon General cites several such diseases: schizophrenia, bipolar disorder, early-onset depression, autism, attention deficit/ hyperactivity disorder, anorexia nervosa, and panic disorder, among many others. Not only is this volume a boon to those wishing to understand the future of neuroscience, it also aims to encourage the initiation of neuroscience programs in developing countries, featuring as it does an appendix full of advice on how to develop such programs. With broad coverage of both basic science and clinical issues, comprising around 150 chapters from a diversity of international authors and including complementary video components, Neuroscience in the 21st Century in its second edition serves as a comprehensive resource to students and researchers alike.

Functional MRI

Author : Ramachandran Ramani
Publisher : Oxford University Press
ISBN 13 : 019029776X
Total Pages : 265 pages
Book Rating : 4.1/5 (92 download)

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Book Synopsis Functional MRI by : Ramachandran Ramani

Download or read book Functional MRI written by Ramachandran Ramani and published by Oxford University Press. This book was released on 2019-01-23 with total page 265 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional MRI: Basic Principles and Emerging Clinical Applications provides an overview of the basic principles of fMRI for clinicians with minimal knowledge of the imaging technique and its research potential and clinical applications. The text is divided into two parts, with Section I covering the primary signal measured in fMRI (BOLD), the correlation between neuronal activity and the BOLD signal, and how the data is analyzed and interpreted in fMRI. Section II explores applications of fMRI in cognitive neuroscience and common psychiatric disorders, surgical planning in neurosurgery, anesthesia and the intensive care unit, and more. Timely and highly accessible, this book is a valuable resource for researchers and clinicians interested in understanding what fMRI is, how it works, and its applications.

Introduction to Perfusion Quantification Using Arterial Spin Labelling

Author : Michael Chappell
Publisher : Oxford University Press
ISBN 13 : 0198793812
Total Pages : 157 pages
Book Rating : 4.1/5 (987 download)

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Book Synopsis Introduction to Perfusion Quantification Using Arterial Spin Labelling by : Michael Chappell

Download or read book Introduction to Perfusion Quantification Using Arterial Spin Labelling written by Michael Chappell and published by Oxford University Press. This book was released on 2018 with total page 157 pages. Available in PDF, EPUB and Kindle. Book excerpt: ASL is an increasingly popular tool to study the brain. The aim of this primer is to equip someone new to the field with the knowledge to make informed choices about ASL acquisition and analysis. While providing a stand-alone introduction to this subject, the text can be read with others in the series for a comprehensive overview of neuroimaging.

Connectomic Deep Brain Stimulation

Author : Andreas Horn
Publisher : Academic Press
ISBN 13 : 0128218622
Total Pages : 602 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Connectomic Deep Brain Stimulation by : Andreas Horn

Download or read book Connectomic Deep Brain Stimulation written by Andreas Horn and published by Academic Press. This book was released on 2021-09-10 with total page 602 pages. Available in PDF, EPUB and Kindle. Book excerpt: Connectomic Deep Brain Stimulation (DBS) covers this highly efficacious treatment option for movement disorders such as Parkinson's Disease, Essential Tremor and Dystonia. The book examines its impact on distributed brain networks that span across the human brain in parallel with modern-day neuroimaging concepts and the connectomics of the brain. It asks several questions, including which cortical areas should DBS electrodes be connected in order to generate the highest possible clinical improvement? Which connections should be avoided? Could these connectomic insights be used to better understand the mechanism of action of DBS? How can they be transferred to individual patients, and more. This book is suitable for neuroscientists, neurologists and functional surgeons studying DBS. It provides practical advice on processing strategies and theoretical background, highlighting and reviewing the current state-of-the-art in connectomic surgery. - Written to provide a "hands-on" approach for neuroscience graduate students, as well as medical personnel from the fields of neurology and neurosurgery - Includes preprocessing strategies (such as co-registration, normalization, lead localization, VTA estimation and fiber-tracking approaches) - Presents references (key articles, books and protocols) for additional detailed study - Provides data analysis boxes in each chapter to help with data interpretation

fMRI

Author : Peter A. Bandettini
Publisher : MIT Press
ISBN 13 : 0262538032
Total Pages : 282 pages
Book Rating : 4.2/5 (625 download)

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Book Synopsis fMRI by : Peter A. Bandettini

Download or read book fMRI written by Peter A. Bandettini and published by MIT Press. This book was released on 2020-02-25 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: An accessible introduction to the history, fundamental concepts, challenges, and controversies of the fMRI by one of the pioneers in the field. The discovery of functional MRI (fMRI) methodology in 1991 was a breakthrough in neuroscience research. This non-invasive, relatively high-speed, and high sensitivity method of mapping human brain activity enabled observation of subtle localized changes in blood flow associated with brain activity. Thousands of scientists around the world have not only embraced fMRI as a new and powerful method that complemented their ongoing studies but have also gone on to redirect their research around this revolutionary technique. This volume in the MIT Press Essential Knowledge series offers an accessible introduction to the history, fundamental concepts, challenges, and controversies of fMRI, written by one of the pioneers in the field. Peter Bandettini covers the essentials of fMRI, providing insight and perspective from his nearly three decades of research. He describes other brain imaging and assessment methods; the sources of fMRI contrasts; the basic methodology, from hardware to pulse sequences; brain activation experiment design strategies; and data and image processing. A unique, standalone chapter addresses major controversies in the field, outlining twenty-six challenges that have helped shape fMRI research. Finally, Bandettini lays out the four essential pillars of fMRI: technology, methodology, interpretation, and applications. The book can serve as a guide for the curious nonexpert and a reference for both veteran and novice fMRI scientists.

fMRI Neurofeedback

Author : Michelle Hampson
Publisher : Academic Press
ISBN 13 : 0128224363
Total Pages : 366 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis fMRI Neurofeedback by : Michelle Hampson

Download or read book fMRI Neurofeedback written by Michelle Hampson and published by Academic Press. This book was released on 2021-10-09 with total page 366 pages. Available in PDF, EPUB and Kindle. Book excerpt: fMRI Neurofeedback provides a perspective on how the field of functional magnetic resonance imaging (fMRI) neurofeedback has evolved, an introduction to state-of-the-art methods used for fMRI neurofeedback, a review of published neuroscientific and clinical applications, and a discussion of relevant ethical considerations. It gives a view of the ongoing research challenges throughout and provides guidance for researchers new to the field on the practical implementation and design of fMRI neurofeedback protocols. This book is designed to be accessible to all scientists and clinicians interested in conducting fMRI neurofeedback research, addressing the variety of different knowledge gaps that readers may have given their varied backgrounds and avoiding field-specific jargon. The book, therefore, will be suitable for engineers, computer scientists, neuroscientists, psychologists, and physicians working in fMRI neurofeedback. - Provides a reference on fMRI neurofeedback covering history, methods, mechanisms, clinical applications, and basic research, as well as ethical considerations - Offers contributions from international experts—leading research groups are represented, including from Europe, Japan, Israel, and the United States - Includes coverage of data analytic methods, study design, neuroscience mechanisms, and clinical considerations - Presents a perspective on future translational development

Handbook of Brain Connectivity

Author : Viktor K. Jirsa
Publisher : Springer
ISBN 13 : 3540715126
Total Pages : 525 pages
Book Rating : 4.5/5 (47 download)

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Book Synopsis Handbook of Brain Connectivity by : Viktor K. Jirsa

Download or read book Handbook of Brain Connectivity written by Viktor K. Jirsa and published by Springer. This book was released on 2007-08-16 with total page 525 pages. Available in PDF, EPUB and Kindle. Book excerpt: Our contemporary understanding of brain function is deeply rooted in the ideas of the nonlinear dynamics of distributed networks. Cognition and motor coordination seem to arise from the interactions of local neuronal networks, which themselves are connected in large scales across the entire brain. The spatial architectures between various scales inevitably influence the dynamics of the brain and thereby its function. But how can we integrate brain connectivity amongst these structural and functional domains? Our Handbook provides an account of the current knowledge on the measurement, analysis and theory of the anatomical and functional connectivity of the brain. All contributors are leading experts in various fields concerning structural and functional brain connectivity. In the first part of the Handbook, the chapters focus on an introduction and discussion of the principles underlying connected neural systems. The second part introduces the currently available non-invasive technologies for measuring structural and functional connectivity in the brain. Part three provides an overview of the analysis techniques currently available and highlights new developments. Part four introduces the application and translation of the concepts of brain connectivity to behavior, cognition and the clinical domain.

Machine Learning in Medical Imaging

Author : Mingxia Liu
Publisher : Springer Nature
ISBN 13 : 3030598616
Total Pages : 702 pages
Book Rating : 4.0/5 (35 download)

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Book Synopsis Machine Learning in Medical Imaging by : Mingxia Liu

Download or read book Machine Learning in Medical Imaging written by Mingxia Liu and published by Springer Nature. This book was released on 2020-10-02 with total page 702 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the proceedings of the 11th International Workshop on Machine Learning in Medical Imaging, MLMI 2020, held in conjunction with MICCAI 2020, in Lima, Peru, in October 2020. The conference was held virtually due to the COVID-19 pandemic. The 68 papers presented in this volume were carefully reviewed and selected from 101 submissions. They focus on major trends and challenges in the above-mentioned area, aiming to identify new-cutting-edge techniques and their uses in medical imaging. Topics dealt with are: deep learning, generative adversarial learning, ensemble learning, sparse learning, multi-task learning, multi-view learning, manifold learning, and reinforcement learning, with their applications to medical image analysis, computer-aided detection and diagnosis, multi-modality fusion, image reconstruction, image retrieval, cellular image analysis, molecular imaging, digital pathology, etc.