Active Matter From Collective Self Propelled Rods To Cell Like Particles

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Cellular Automaton Modeling of Biological Pattern Formation

Author : Andreas Deutsch
Publisher : Birkhäuser
ISBN 13 : 1489979808
Total Pages : 470 pages
Book Rating : 4.4/5 (899 download)

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Book Synopsis Cellular Automaton Modeling of Biological Pattern Formation by : Andreas Deutsch

Download or read book Cellular Automaton Modeling of Biological Pattern Formation written by Andreas Deutsch and published by Birkhäuser. This book was released on 2018-03-09 with total page 470 pages. Available in PDF, EPUB and Kindle. Book excerpt: This text explores the use of cellular automata in modeling pattern formation in biological systems. It describes several mathematical modeling approaches utilizing cellular automata that can be used to study the dynamics of interacting cell systems both in simulation and in practice. New in this edition are chapters covering cell migration, tissue development, and cancer dynamics, as well as updated references and new research topic suggestions that reflect the rapid development of the field. The book begins with an introduction to pattern-forming principles in biology and the various mathematical modeling techniques that can be used to analyze them. Cellular automaton models are then discussed in detail for different types of cellular processes and interactions, including random movement, cell migration, adhesive cell interaction, alignment and cellular swarming, growth processes, pigment cell pattern formation, tissue development, tumor growth and invasion, and Turing-type patterns and excitable media. In the final chapter, the authors critically discuss possibilities and limitations of the cellular automaton approach in modeling various biological applications, along with future research directions. Suggestions for research projects are provided throughout the book to encourage additional engagement with the material, and an accompanying simulator is available for readers to perform their own simulations on several of the models covered in the text. QR codes are included within the text for easy access to the simulator. With its accessible presentation and interdisciplinary approach, Cellular Automaton Modeling of Biological Pattern Formation is suitable for graduate and advanced undergraduate students in mathematical biology, biological modeling, and biological computing. It will also be a valuable resource for researchers and practitioners in applied mathematics, mathematical biology, computational physics, bioengineering, and computer science. PRAISE FOR THE FIRST EDITION “An ideal guide for someone with a mathematical or physical background to start exploring biological modelling. Importantly, it will also serve as an excellent guide for experienced modellers to innovate and improve their methodologies for analysing simulation results.” —Mathematical Reviews

Active Materials

Author : Peter Fratzl
Publisher : Walter de Gruyter GmbH & Co KG
ISBN 13 : 3110562065
Total Pages : 378 pages
Book Rating : 4.1/5 (15 download)

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Book Synopsis Active Materials by : Peter Fratzl

Download or read book Active Materials written by Peter Fratzl and published by Walter de Gruyter GmbH & Co KG. This book was released on 2021-12-20 with total page 378 pages. Available in PDF, EPUB and Kindle. Book excerpt: What are active materials? This book aims to introduce and redefine conceptions of matter by considering materials as entities that ‘sense’ and respond to their environment. By examining the modeling of, the experiments on, and the construction of these materials, and by developing a theory of their structure, their collective activity, and their functionality, this volume identifies and develops a novel scientific approach to active materials. Moreover, essays on the history and philosophy of metallurgy, chemistry, biology, and materials science provide these various approaches to active materials with a historical and cultural context. The interviews with experts from the natural sciences included in this volume develop new understandings of ‘active matter’ and active materials in relation to a range of research objects and from the perspective of different scientific disciplines, including biology, physics, chemistry, and materials science. These insights are complemented by contributions on the activity of matter and materials from the humanities and the design field. Discusses the mechanisms of active materials and their various conceptualizations in materials science. Redefines conceptions of active materials through interviews with experts from the natural sciences. Contextualizes, historizes, and reflects on different notions of matter/materials and activity through contributions from the humanities. A highly interdisciplinary approach to a cutting-edge research topic, with contributions from both the sciences and the humanities.

Active Matter Within and Around Us

Author : Len Pismen
Publisher : Springer Nature
ISBN 13 : 3030684210
Total Pages : 227 pages
Book Rating : 4.0/5 (36 download)

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Book Synopsis Active Matter Within and Around Us by : Len Pismen

Download or read book Active Matter Within and Around Us written by Len Pismen and published by Springer Nature. This book was released on 2021-02-15 with total page 227 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents a comprehensive review of various aspects of the novel and rapidly developing field of active matter, which encompasses a wide variety of self-organized self-driven energy-consuming media or agents. Most naturally occurring examples are of biological origin, spanning all scales from intracellular structures to swimming and crawling cells and microorganisms, to living tissues, bacterial colonies and flocks of birds. But the field also encompasses artificial systems, from colloids to soft robots. Intrinsically out of equilibrium and free of constraints of time-reversal symmetry, such systems display a range of surprising and unusual behaviors. In this book, the author emphasizes connections between fluid-mechanical, material, biological and technological aspects of active matter. He employs a minimum of mathematical tools, ensuring that the presentation is accessible to a wider scientific community. Richly illustrated, it gives the reader a clear picture of this fascinating field, its diverse phenomena and its open questions.

Self-organized Motion

Author : Satoshi Nakata
Publisher : Royal Society of Chemistry
ISBN 13 : 1788015436
Total Pages : 388 pages
Book Rating : 4.7/5 (88 download)

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Book Synopsis Self-organized Motion by : Satoshi Nakata

Download or read book Self-organized Motion written by Satoshi Nakata and published by Royal Society of Chemistry. This book was released on 2018-11-01 with total page 388 pages. Available in PDF, EPUB and Kindle. Book excerpt: Self-propelled objects (particles, droplets) are autonomous agents that can convert energy from the environment into motion. These motions include nonlinear behaviour such as oscillations, synchronization, bifurcation, and pattern formation. In recent years, there has been much interest in self-propelled objects for their potential role in mass transport or their use as carriers in confined spaces. An improved understanding of self-organized motion has even allowed researchers to design objects for specific motion. This book gives an overview of the principles of self-propelled motion in chemical objects (particles, droplets) far from their thermodynamic equilibrium, at various spatial scales. Theoretical aspects, the characteristics of the motion and the design procedures of such systems are discussed from the viewpoint of nonlinear dynamics and examples of applications for these nonlinear systems are provided. This book is suitable for researchers and graduate students interested in physical and theoretical chemistry as well as soft matter.

Flowing Matter

Author : Federico Toschi
Publisher : Springer Nature
ISBN 13 : 3030233707
Total Pages : 313 pages
Book Rating : 4.0/5 (32 download)

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Book Synopsis Flowing Matter by : Federico Toschi

Download or read book Flowing Matter written by Federico Toschi and published by Springer Nature. This book was released on 2019-09-25 with total page 313 pages. Available in PDF, EPUB and Kindle. Book excerpt: This open access book, published in the Soft and Biological Matter series, presents an introduction to selected research topics in the broad field of flowing matter, including the dynamics of fluids with a complex internal structure -from nematic fluids to soft glasses- as well as active matter and turbulent phenomena. Flowing matter is a subject at the crossroads between physics, mathematics, chemistry, engineering, biology and earth sciences, and relies on a multidisciplinary approach to describe the emergence of the macroscopic behaviours in a system from the coordinated dynamics of its microscopic constituents. Depending on the microscopic interactions, an assembly of molecules or of mesoscopic particles can flow like a simple Newtonian fluid, deform elastically like a solid or behave in a complex manner. When the internal constituents are active, as for biological entities, one generally observes complex large-scale collective motions. Phenomenology is further complicated by the invariable tendency of fluids to display chaos at the large scales or when stirred strongly enough. This volume presents several research topics that address these phenomena encompassing the traditional micro-, meso-, and macro-scales descriptions, and contributes to our understanding of the fundamentals of flowing matter. This book is the legacy of the COST Action MP1305 “Flowing Matter”.

Stochastic Dynamics

Author : Lutz Schimansky-Geier
Publisher : Springer
ISBN 13 : 9783662141212
Total Pages : 386 pages
Book Rating : 4.1/5 (412 download)

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Book Synopsis Stochastic Dynamics by : Lutz Schimansky-Geier

Download or read book Stochastic Dynamics written by Lutz Schimansky-Geier and published by Springer. This book was released on 2014-03-12 with total page 386 pages. Available in PDF, EPUB and Kindle. Book excerpt: Stochastic Dynamics, born almost 100 years ago with the early explanations of Brownian motion by physicists, is nowadays a quickly expanding field of research within nonequilibrium statistical physics. The present volume provides a survey on the influence of fluctuations in nonlinear dynamics. It addresses specialists, although the intention of this book is to provide teachers and students with a reliable resource for seminar work. In particular, the reader will find many examples illustrating the theory as well as a host of recent findings.

Order and Fluctuations in Collective Dynamics of Swimming Bacteria

Author : Daiki Nishiguchi
Publisher : Springer Nature
ISBN 13 : 9813299983
Total Pages : 137 pages
Book Rating : 4.8/5 (132 download)

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Book Synopsis Order and Fluctuations in Collective Dynamics of Swimming Bacteria by : Daiki Nishiguchi

Download or read book Order and Fluctuations in Collective Dynamics of Swimming Bacteria written by Daiki Nishiguchi and published by Springer Nature. This book was released on 2020-01-31 with total page 137 pages. Available in PDF, EPUB and Kindle. Book excerpt: This thesis focuses on experimental studies on collective motion using swimming bacteria as model active-matter systems. It offers comprehensive reviews of state-of-the-art theories and experiments on collective motion from the viewpoint of nonequilibrium statistical physics. The author presents his experimental studies on two major classes of collective motion that had been well studied theoretically. Firstly, swimming filamentous bacteria in a thin fluid layer are shown to exhibit true, long-range orientational order and anomalously strong giant density fluctuations, which are considered universal and landmark signatures of collective motion by many numerical and theoretical works but have never been observed in real systems. Secondly, chaotic bacterial turbulence in a three-dimensional dense suspension without any long-range order as described in the first half is demonstrated to be capable of achieving antiferromagnetic vortex order by imposing a small number of constraints with appropriate periodicity. The experimental results presented significantly advance our fundamental understanding of order and fluctuations in collective motion of motile elements and their future applications.

Anisotropic Particle Assemblies

Author : Ning Wu
Publisher : Elsevier
ISBN 13 : 0128041099
Total Pages : 368 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Anisotropic Particle Assemblies by : Ning Wu

Download or read book Anisotropic Particle Assemblies written by Ning Wu and published by Elsevier. This book was released on 2018-07-12 with total page 368 pages. Available in PDF, EPUB and Kindle. Book excerpt: Anisotropic Particle Assemblies: Synthesis, Assembly, Modeling, and Applications covers the synthesis, assembly, modeling, and applications of various types of anisotropic particles. Topics such as chemical synthesis and scalable fabrication of colloidal molecules, molecular mimetic self-assembly, directed assembly under external fields, theoretical and numerical multi-scale modeling, anisotropic materials with novel interfacial properties, and the applications of these topics in renewable energy, intelligent micro-machines, and biomedical fields are discussed in depth. Contributors to this book are internationally known experts who have been actively studying each of these subfields for many years.This book is an invaluable reference for researchers and chemical engineers who are working at the intersection of physics, chemistry, chemical engineering, and materials science and engineering. It educates students, trains the next generation of researchers, and stimulates continuous development in this rapidly emerging area for new materials and innovative technologies. - Provides comprehensive coverage on new developments in anisotropic particles - Features chapters written by emerging and leading experts in each of the subfields - Contains information that will appeal to a broad spectrum of professionals, including but not limited to chemical engineers, chemists, physicists, and materials scientists and engineers - Serves as both a reference book for researchers and a textbook for graduate students

Colloidal Active Matter

Author : Francesc Sagués Mestre
Publisher : CRC Press
ISBN 13 : 1000684806
Total Pages : 308 pages
Book Rating : 4.0/5 (6 download)

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Book Synopsis Colloidal Active Matter by : Francesc Sagués Mestre

Download or read book Colloidal Active Matter written by Francesc Sagués Mestre and published by CRC Press. This book was released on 2022-10-07 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: What do bird flocks, bacterial swarms, cell tissues, and cytoskeletal fluids have in common? They are all examples of active matter. This book explores how scientists in various disciplines, from physics to biology, have collated a solid corpus of experimental designs and theories during the last two decades to decipher active systems. The book addresses, from a multidisciplinary viewpoint, the field of active matter at a colloidal scale. Concepts, experiments, and theoretical models are put side by side to fully illuminate the subtilities of active systems. A large variety of subjects, from microswimmers or driven colloids to self-organized active fluids, are analysed within a unified perspective. Generic collective effects of self-propelled or driven colloids, such as motility-induced flocking, and new paradigms, such as the celebrated concept of active nematics in reconstituted protein-based fluids, are discussed using well-known experimental scenarios and recognized theories. Topics are covered with rigor and in a self-consistent way, reaching both practitioners and newcomers to the field. The diversity of topics and conceptual challenges in active matter have long hampered the chance to explore the field with a general perspective. This monograph, the first single-authored title on active matter, is intended to fill this gap by bridging disparate experimental and theoretical interests from colloidal soft matter to cell biophysics.

Active Matter in Complex Environments

Author : Liheng Cai
Publisher : Frontiers Media SA
ISBN 13 : 2832502199
Total Pages : 162 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Active Matter in Complex Environments by : Liheng Cai

Download or read book Active Matter in Complex Environments written by Liheng Cai and published by Frontiers Media SA. This book was released on 2022-10-12 with total page 162 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Optimal Navigation in Active Matter

Author : Lorenzo Piro
Publisher : Springer Nature
ISBN 13 : 3031525779
Total Pages : 131 pages
Book Rating : 4.0/5 (315 download)

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Book Synopsis Optimal Navigation in Active Matter by : Lorenzo Piro

Download or read book Optimal Navigation in Active Matter written by Lorenzo Piro and published by Springer Nature. This book was released on with total page 131 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Controlled Pulmonary Drug Delivery

Author : Hugh D.C. Smyth
Publisher : Springer Science & Business Media
ISBN 13 : 1441997458
Total Pages : 560 pages
Book Rating : 4.4/5 (419 download)

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Book Synopsis Controlled Pulmonary Drug Delivery by : Hugh D.C. Smyth

Download or read book Controlled Pulmonary Drug Delivery written by Hugh D.C. Smyth and published by Springer Science & Business Media. This book was released on 2011-06-24 with total page 560 pages. Available in PDF, EPUB and Kindle. Book excerpt: The pace of new research and level of innovation repeatedly introduced into the field of drug delivery to the lung is surprising given its state of maturity since the introduction of the pressurized metered dose inhaler over a half a century ago. It is clear that our understanding of pulmonary drug delivery has now evolved to the point that inhalation aerosols can be controlled both spatially and temporally to optimize their biological effects. These abilities include controlling lung deposition, by adopting formulation strategies or device technologies, and controlling drug uptake and release through sophisticated particle technologies. The large number of contributions to the scientific literature and variety of excellent texts published in recent years is evidence for the continued interest in pulmonary drug delivery research. This reference text endeavors to bring together the fundamental theory and practice of controlled drug delivery to the airways that is unavailable elsewhere. Collating and synthesizing the material in this rapidly evolving field presented a challenge and ultimately a sense of achievement that is hopefully reflected in the content of the volume.

Colloids and the Depletion Interaction

Author : Henk N. W. Lekkerkerker
Publisher : Springer Nature
ISBN 13 : 3031521315
Total Pages : 400 pages
Book Rating : 4.0/5 (315 download)

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Book Synopsis Colloids and the Depletion Interaction by : Henk N. W. Lekkerkerker

Download or read book Colloids and the Depletion Interaction written by Henk N. W. Lekkerkerker and published by Springer Nature. This book was released on with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Biological Physics

Author : Philip Nelson
Publisher : Macmillan Higher Education
ISBN 13 : 1319038948
Total Pages : 661 pages
Book Rating : 4.3/5 (19 download)

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Book Synopsis Biological Physics by : Philip Nelson

Download or read book Biological Physics written by Philip Nelson and published by Macmillan Higher Education. This book was released on 2013-12-16 with total page 661 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biological Physics focuses on new results in molecular motors, self-assembly, and single-molecule manipulation that have revolutionized the field in recent years, and integrates these topics with classical results. The text also provides foundational material for the emerging field of nanotechnology.

Stochastic Systems with Time Delay

Author : Sarah A.M. Loos
Publisher : Springer Nature
ISBN 13 : 3030807711
Total Pages : 296 pages
Book Rating : 4.0/5 (38 download)

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Book Synopsis Stochastic Systems with Time Delay by : Sarah A.M. Loos

Download or read book Stochastic Systems with Time Delay written by Sarah A.M. Loos and published by Springer Nature. This book was released on 2021-09-18 with total page 296 pages. Available in PDF, EPUB and Kindle. Book excerpt: The nonequilibrium behavior of nanoscopic and biological systems, which are typically strongly fluctuating, is a major focus of current research. Lately, much progress has been made in understanding such systems from a thermodynamic perspective. However, new theoretical challenges emerge when the fluctuating system is additionally subject to time delay, e.g. due to the presence of feedback loops. This thesis advances this young and vibrant research field in several directions. The first main contribution concerns the probabilistic description of time-delayed systems; e.g. by introducing a versatile approximation scheme for nonlinear delay systems. Second, it reveals that delay can induce intriguing thermodynamic properties such as anomalous (reversed) heat flow. More generally, the thesis shows how to treat the thermodynamics of non-Markovian systems by introducing auxiliary variables. It turns out that delayed feedback is inextricably linked to nonreciprocal coupling, information flow, and to net energy input on the fluctuating level.

The Frenkel-Kontorova Model

Author : Oleg M. Braun
Publisher : Springer Science & Business Media
ISBN 13 : 3662103311
Total Pages : 490 pages
Book Rating : 4.6/5 (621 download)

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Book Synopsis The Frenkel-Kontorova Model by : Oleg M. Braun

Download or read book The Frenkel-Kontorova Model written by Oleg M. Braun and published by Springer Science & Business Media. This book was released on 2013-03-14 with total page 490 pages. Available in PDF, EPUB and Kindle. Book excerpt: An overview of the basic concepts, methods and applications of nonlinear low-dimensional solid state physics based on the Frenkel--Kontorova model and its generalizations. The book covers many important topics such as the nonlinear dynamics of discrete systems, the dynamics of solitons and their interaction, commensurate and incommensurate systems, statistical mechanics of nonlinear systems, and nonequilibrium dynamics of interacting many-body systems.

Out-of-equilibrium Soft Matter

Author : Christina Kurzthaler
Publisher : Royal Society of Chemistry
ISBN 13 : 1839169478
Total Pages : 348 pages
Book Rating : 4.8/5 (391 download)

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Book Synopsis Out-of-equilibrium Soft Matter by : Christina Kurzthaler

Download or read book Out-of-equilibrium Soft Matter written by Christina Kurzthaler and published by Royal Society of Chemistry. This book was released on 2023-03-24 with total page 348 pages. Available in PDF, EPUB and Kindle. Book excerpt: The term active fluids refers to motions that are created by transforming energy from the surroundings into directed motion. There are many examples, both natural and synthetic, including individual swimming bacteria or motile cells, drops and bubbles that move owing to surface stresses (so-called Marangoni motions), and chemical- or optical-driven colloids. Investigations into active fluids provide new insights into non-equilibrium systems, have the potential for novel applications, and open new directions in physics, chemistry, biology and engineering. This book provides an expert introduction to active fluids systems, covering simple to complex environments. It explains the interplay of chemical processes and hydrodynamics, including the roles of mechanical and rheological properties across active fluids, with reference to experiments, theory, and simulations. These concepts are discussed for a variety of scenarios, such as the trajectories of microswimmers, cell crawling and fluid stirring, and apply to collective behaviours of dense suspensions and active gels. Emerging avenues of research are highlighted, ranging from the role of active processes for biological functions to programmable active materials, showcasing the exciting potential of this rapidly-evolving research field.