Three-dimensional Coherent X-ray Diffractive Imaging of Whole Frozen-hydrated Cells

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Publisher :
ISBN 13 :
Total Pages : 9 pages
Book Rating : 4.:/5 (957 download)

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Book Synopsis Three-dimensional Coherent X-ray Diffractive Imaging of Whole Frozen-hydrated Cells by :

Download or read book Three-dimensional Coherent X-ray Diffractive Imaging of Whole Frozen-hydrated Cells written by and published by . This book was released on 2015 with total page 9 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Coherent X-ray diffractive imaging on the single-cell-level of microbial samples

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Author :
Publisher : Göttingen University Press
ISBN 13 : 3863951905
Total Pages : 254 pages
Book Rating : 4.8/5 (639 download)

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Book Synopsis Coherent X-ray diffractive imaging on the single-cell-level of microbial samples by : Robin Niklas Wilke

Download or read book Coherent X-ray diffractive imaging on the single-cell-level of microbial samples written by Robin Niklas Wilke and published by Göttingen University Press. This book was released on 2015 with total page 254 pages. Available in PDF, EPUB and Kindle. Book excerpt: Since its first experimental demonstration in 1999, Coherent X-Ray Diffractive Imaging has become one of the most promising high resolution X-Ray imaging techniques using coherent radiation produced by brilliant synchrotron storage rings. The ability to directly invert diffraction data with the help of advanced algorithms has paved the way for microscopic investigations and wave-field analyses on the spatial scale of nanometres without the need for inefficient imaging lenses. X-Ray phase contrast which is a measure of the electron density is an important contrast mode of soft biological specimens. For the case of many dominant elements of soft biological matter, the electron density can be converted into an effective mass density offering a unique quantitative information channel which may shed light on important questions such as DNA compaction in the bacterial nucleoid through ‚weighing with light‘. In this work X-Ray phase contrast maps have been obtained from different biological samples by exploring different methods. In particular, the techniques Ptychography and Waveguide-Holographic-Imaging have been used to obtain twodimensional and three-dimensional mass density maps on the single-cell-level of freeze-dried cells of the bacteria Deinococcus radiodurans, Bacillus subtilis and Bacillus thuringiensis allowing, for instance, to estimate the dry weight of the bacterial genome in a near native state. On top of this, reciprocal space information from coherent small angle X-Ray scattering (cellular Nano-Diffraction) of the fine structure of the bacterial cells has been recorded in a synergistic manner and has been analysed down to a resolution of about 2.3/nm exceeding current limits of direct imaging approaches. Furthermore, the dynamic range of present detector technology being one of the major limiting factors of ptychographic phasing of farfield diffraction data has been significantly increased. Overcoming this problem for the case of the very intense X-Ray beam produced by Kirkpatrick-Baez mirrors has been explored by using semi-transparent central stops.

X-Ray Free-Electron Laser

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Publisher : MDPI
ISBN 13 : 3038428795
Total Pages : 457 pages
Book Rating : 4.0/5 (384 download)

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Book Synopsis X-Ray Free-Electron Laser by : Kiyoshi Ueda

Download or read book X-Ray Free-Electron Laser written by Kiyoshi Ueda and published by MDPI. This book was released on 2018-07-04 with total page 457 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is a printed edition of the Special Issue "X-Ray Free-Electron Laser" that was published in Applied Sciences

Multiscale X-Ray Analysis of Biological Cells and Tissues by Scanning Diffraction and Coherent Imaging

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Publisher : Göttingen University Press
ISBN 13 : 3863954203
Total Pages : 183 pages
Book Rating : 4.8/5 (639 download)

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Book Synopsis Multiscale X-Ray Analysis of Biological Cells and Tissues by Scanning Diffraction and Coherent Imaging by : Jan-David Nicolas

Download or read book Multiscale X-Ray Analysis of Biological Cells and Tissues by Scanning Diffraction and Coherent Imaging written by Jan-David Nicolas and published by Göttingen University Press. This book was released on 2019 with total page 183 pages. Available in PDF, EPUB and Kindle. Book excerpt: Understanding the intricate details of muscle contraction has a long-standing tradition in biophysical research. X-ray diffraction has been one of the key techniques to resolve the nanometer-sized molecular machinery involved in force generation. Modern, powerful X-ray sources now provide billions of X-ray photons in time intervals as short as microseconds, enabling fast time-resolved experiments that shed further light on the complex relationship between muscle structure and function. Another approach harnesses this power by repeatedly performing such an experiment at different locations in a sample. With millions of repeated exposures in a single experiment, X-ray diffraction can seamlessly be turned into a raster imaging method, neatly combining real- and reciprocal space information. This thesis has focused on the advancement of this scanning scheme and its application to soft biological tissue, in particular muscle tissue. Special emphasis was placed on the extraction of meaningful, quantitative structural parameters such as the interfilament distance of the actomyosin lattice in cardiac muscle. The method was further adapted to image biological samples on a range of scales, from isolated cells to millimeter-sized tissue sections. Due to the ‘photon-hungry’ nature of the technique, its full potential is often exploited in combination with full-field imaging techniques. From the vast set of microscopic tools available, coherent full-field X-ray imaging has proven to be particularly useful. This multimodal approach allows to correlate two- and three-dimensional images of cells and tissue with diffraction maps of structure parameters. With the set of tools developed in this thesis, scanning X-ray diffraction can now be efficiently used for the structural analysis of soft biological tissues with overarching future applications in biophysical and biomedical research.

X-Ray Diffraction Imaging of Biological Cells

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Publisher : Springer
ISBN 13 : 443156618X
Total Pages : 243 pages
Book Rating : 4.4/5 (315 download)

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Book Synopsis X-Ray Diffraction Imaging of Biological Cells by : Masayoshi Nakasako

Download or read book X-Ray Diffraction Imaging of Biological Cells written by Masayoshi Nakasako and published by Springer. This book was released on 2018-03-29 with total page 243 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this book, the author describes the development of the experimental diffraction setup and structural analysis of non-crystalline particles from material science and biology. Recent advances in X-ray free electron laser (XFEL)-coherent X-ray diffraction imaging (CXDI) experiments allow for the structural analysis of non-crystalline particles to a resolution of 7 nm, and to a resolution of 20 nm for biological materials. Now XFEL-CXDI marks the dawn of a new era in structural analys of non-crystalline particles with dimensions larger than 100 nm, which was quite impossible in the 20th century. To conduct CXDI experiments in both synchrotron and XFEL facilities, the author has developed apparatuses, named KOTOBUKI-1 and TAKASAGO-6 for cryogenic diffraction experiments on frozen-hydrated non-crystalline particles at around 66 K. At the synchrotron facility, cryogenic diffraction experiments dramatically reduce radiation damage of specimen particles and allow tomography CXDI experiments. In addition, in XFEL experiments, non-crystalline particles scattered on thin support membranes and flash-cooled can be used to efficiently increase the rate of XFEL pulses. The rate, which depends on the number density of scattered particles and the size of X-ray beams, is currently 20-90%, probably the world record in XFEL-CXDI experiments. The experiment setups and results are introduced in this book. The author has also developed software suitable for efficiently processing of diffraction patterns and retrieving electron density maps of specimen particles based on the diffraction theory used in CXDI.

Investigating Cellular Nanoscale with X-rays

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Publisher : Göttingen University Press
ISBN 13 : 3863952871
Total Pages : 192 pages
Book Rating : 4.8/5 (639 download)

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Book Synopsis Investigating Cellular Nanoscale with X-rays by : Clément Hémonnot

Download or read book Investigating Cellular Nanoscale with X-rays written by Clément Hémonnot and published by Göttingen University Press. This book was released on 2016 with total page 192 pages. Available in PDF, EPUB and Kindle. Book excerpt: The advances and technical improvements of X-ray imaging techniques, taking advantage of X-ray focussing optics and high intensity synchrotron sources, nowadays allow for the use of X-rays to probe the cellular nanoscale. Importantly, X-rays permit thick samples to be imaged without sectioning or slicing. In this work, two macromolecules, namely keratin intermediate filament (IF) proteins and DNA, both essential components of cells, were studied by X-ray techniques. Keratin IF proteins make up an integral part of the cytoskeleton of epithelial cells and form a dense intracellular network of bundles. This network is built from monomers in a hierarchical fashion. Thus, the keratin structure formation spans a large range of length scales from a few nanometres (monomers) to micrometres (networks). Here, keratin was studied at three different scales: i) filaments, ii) bundles and iii) networks. Solution small-angle X-ray scattering revealed distinct structural and organisational characteristics of these highly charged polyelectrolyte filaments, such as increasing radius with increasing salt concentration and spatial accumulation of ions depending on the salt concentration. The results are quantified by employing advanced modelling of keratin IFs by a core cylinder fl anked with Gaussian chains. Scanning micro- diffraction was used to study keratin at the bundle scale. Very different morphologies of keratin bundles were observed at different salt conditions. At the network scale, new imaging approaches and analyses were applied to the study of whole cells. Ptychography and scanning X-ray nano-diffraction imaging were performed on the same cells, allowing for high resolution in real and reciprocal space, thereby revealing the internal structure of these networks. By using a fitting routine based on simulations of IFs packed on a hexagonal lattice, the radius of each fi lament and distance between fi laments were retrieved. In mammalian cells, each nucleus contains 2 nm-thick DNA double helices with a total length of about 2 m. The DNA strands are packed in a highly hierarchical manner into individual chromosomes. DNA was studied in intact cells by visible light microscopy and scanning X-ray nano-diffraction, unveiling the compaction und decompaction of DNA during the cell cycle. Thus, we obtained information on the aggregation state of the nuclear DNA at a real space resolution on the order of few hundreds nm. To exploit to the reciprocal space information, individual diffraction patterns were analysed according to a generalised Porod’s law at a resolution down to 10 nm. We were able to distinguish nucleoli, heterochromatin and euchromatin in the nuclei and follow the compaction and decompaction during the cell division cycle.

21st Century Nanoscience – A Handbook

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Publisher : CRC Press
ISBN 13 : 1000702863
Total Pages : 369 pages
Book Rating : 4.0/5 (7 download)

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Book Synopsis 21st Century Nanoscience – A Handbook by : Klaus D. Sattler

Download or read book 21st Century Nanoscience – A Handbook written by Klaus D. Sattler and published by CRC Press. This book was released on 2020-04-08 with total page 369 pages. Available in PDF, EPUB and Kindle. Book excerpt: This 21st Century Nanoscience Handbook will be the most comprehensive, up-to-date large reference work for the field of nanoscience. Handbook of Nanophysics by the same editor published in the fall of 2010 and was embraced as the first comprehensive reference to consider both fundamental and applied aspects of nanophysics. This follow-up project has been conceived as a necessary expansion and full update that considers the significant advances made in the field since 2010. It goes well beyond the physics as warranted by recent developments in the field. This seventh volume in a ten-volume set covers bioinspired systems and methods. Key Features: Provides the most comprehensive, up-to-date large reference work for the field. Chapters written by international experts in the field. Emphasises presentation and real results and applications. This handbook distinguishes itself from other works by its breadth of coverage, readability and timely topics. The intended readership is very broad, from students and instructors to engineers, physicists, chemists, biologists, biomedical researchers, industry professionals, governmental scientists, and others whose work is impacted by nanotechnology. It will be an indispensable resource in academic, government, and industry libraries worldwide. The fields impacted by nanophysics extend from materials science and engineering to biotechnology, biomedical engineering, medicine, electrical engineering, pharmaceutical science, computer technology, aerospace engineering, mechanical engineering, food science, and beyond.

21st Century Nanoscience

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Publisher : CRC Press
ISBN 13 : 1351260553
Total Pages : 4153 pages
Book Rating : 4.3/5 (512 download)

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Book Synopsis 21st Century Nanoscience by : Klaus D. Sattler

Download or read book 21st Century Nanoscience written by Klaus D. Sattler and published by CRC Press. This book was released on 2022-01-18 with total page 4153 pages. Available in PDF, EPUB and Kindle. Book excerpt: This 21st Century Nanoscience Handbook will be the most comprehensive, up-to-date large reference work for the field of nanoscience. Handbook of Nanophysics, by the same editor, published in the fall of 2010, was embraced as the first comprehensive reference to consider both fundamental and applied aspects of nanophysics. This follow-up project has been conceived as a necessary expansion and full update that considers the significant advances made in the field since 2010. It goes well beyond the physics as warranted by recent developments in the field. Key Features: Provides the most comprehensive, up-to-date large reference work for the field. Chapters written by international experts in the field. Emphasises presentation and real results and applications. This handbook distinguishes itself from other works by its breadth of coverage, readability and timely topics. The intended readership is very broad, from students and instructors to engineers, physicists, chemists, biologists, biomedical researchers, industry professionals, governmental scientists, and others whose work is impacted by nanotechnology. It will be an indispensable resource in academic, government, and industry libraries worldwide. The fields impacted by nanoscience extend from materials science and engineering to biotechnology, biomedical engineering, medicine, electrical engineering, pharmaceutical science, computer technology, aerospace engineering, mechanical engineering, food science, and beyond.

X-ray Microscopy

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Publisher : Cambridge University Press
ISBN 13 : 110878173X
Total Pages : 595 pages
Book Rating : 4.1/5 (87 download)

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Book Synopsis X-ray Microscopy by : Chris Jacobsen

Download or read book X-ray Microscopy written by Chris Jacobsen and published by Cambridge University Press. This book was released on 2019-12-19 with total page 595 pages. Available in PDF, EPUB and Kindle. Book excerpt: Written by a pioneer in the field, this text provides a complete introduction to X-ray microscopy, providing all of the technical background required to use, understand and even develop X-ray microscopes. Starting from the basics of X-ray physics and focusing optics, it goes on to cover imaging theory, tomography, chemical and elemental analysis, lensless imaging, computational methods, instrumentation, radiation damage, and cryomicroscopy, and includes a survey of recent scientific applications. Designed as a 'one-stop' text, it provides a unified notation, and shows how computational methods in different areas are linked with one another. Including numerous derivations, and illustrated with dozens of examples throughout, this is an essential text for academics and practitioners across engineering, the physical sciences and the life sciences who use X-ray microscopy to analyze their specimens, as well as those taking courses in X-ray microscopy.

Multiscale X-ray Structural Analysis of Cardiac Cells and Tissues

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Publisher : Universitätsverlag Göttingen
ISBN 13 : 3863955366
Total Pages : 234 pages
Book Rating : 4.8/5 (639 download)

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Book Synopsis Multiscale X-ray Structural Analysis of Cardiac Cells and Tissues by : Marius Reichardt

Download or read book Multiscale X-ray Structural Analysis of Cardiac Cells and Tissues written by Marius Reichardt and published by Universitätsverlag Göttingen. This book was released on 2022 with total page 234 pages. Available in PDF, EPUB and Kindle. Book excerpt: The cardiac function relies on an intricate molecular and cellular three-dimensional (3d) architecture of a complex, dense and co-dependent cellular network. Structural alterations of the cardiac structure can affect its essential function and lead to severe dysfunction of the organ. Cardiovascular diseases are the main cause of death worldwide with a rising incidence. However, it is not possible to give a generalized answer how the heart is formed. Up to now, cardiac structure as well as physiologic and disease-related tissue alterations of the tissue are mainly investigated by established 2d imaging methods such as optical microscopy or electron microscopy. This work presents a multiscale and multimodal X-ray imaging approach, which allows to probe the heart structure from the scale of entire intact murine hearts to the molecular organisation of the sarcomer structure. While the molecular structure of the actomyosin complex is probed by scanning X-ray diffraction, the 3d arrangement of the cellular network is investigated by propagation-based X-ray phase-contrast tomography. In this context, the concept of 3d virtual histology of cardiac tissue by X-ray phase-contrast tomography using laboratory sources as well as highly coherent synchrotron radiation is being further developed.

Smart Health

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Publisher : Springer Nature
ISBN 13 : 3030344827
Total Pages : 397 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis Smart Health by : Hsinchun Chen

Download or read book Smart Health written by Hsinchun Chen and published by Springer Nature. This book was released on 2019-11-20 with total page 397 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the thoroughly refereed conference proceedings of the International Conference for Smart Health, ICSH 2019, held in Shenzhen, China, in July 2019. The 34 full papers and 1 short papers presented were carefully reviewed and selected from 43 submissions. In this book a lively exchange and collaborations between the growing international smart health research scholars and communities has been introduced, and to advance our understanding about the technical, practical, economic, behavioral, and social issues center on smart health . The selected papers are organized into the following topics: Precision Medicine and Telehealth, Social, Psychosocial and Behavioral Determinants of Health, Data science, Analytics, Clinical and Business Intelligence, Clinical Informatics and Clinician Engagement.

Progress in Three-Dimensional Coherent X-Ray Diffraction Imaging

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Publisher :
ISBN 13 :
Total Pages : 6 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Progress in Three-Dimensional Coherent X-Ray Diffraction Imaging by : J. M. Kinney

Download or read book Progress in Three-Dimensional Coherent X-Ray Diffraction Imaging written by J. M. Kinney and published by . This book was released on 2005 with total page 6 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Fourier inversion of phased coherent diffraction patterns offers images without the resolution and depth-of-focus limitations of lens-based tomographic systems. We report on our recent experimental images inverted using recent developments in phase retrieval algorithms, and summarize efforts that led to these accomplishments. These include ab-initio reconstruction of a two-dimensional test pattern, infinite depth of focus image of a thick object, and its high-resolution ({approx}10 nm resolution) three-dimensional image. Developments on the structural imaging of low density aerogel samples are discussed.

Health Information Science

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Publisher : Springer Nature
ISBN 13 : 3030329623
Total Pages : 322 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis Health Information Science by : Hua Wang

Download or read book Health Information Science written by Hua Wang and published by Springer Nature. This book was released on 2019-10-09 with total page 322 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 8th International Conference on Health Information Science, HIS 2019, held in Xi’an, China, in October 2019. The 14 full papers and 14 short papers presented were carefully reviewed and selected from 60 submissions. The papers are organized in topical sections named: Medical Information System and Platform; Mining Medical Data; EEG and ECG; Medical Image; Mental Health; and Healthcare.

Nanoscale Photonic Imaging

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Publisher : Springer Nature
ISBN 13 : 3030344134
Total Pages : 634 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis Nanoscale Photonic Imaging by : Tim Salditt

Download or read book Nanoscale Photonic Imaging written by Tim Salditt and published by Springer Nature. This book was released on 2020-06-09 with total page 634 pages. Available in PDF, EPUB and Kindle. Book excerpt: This open access book, edited and authored by a team of world-leading researchers, provides a broad overview of advanced photonic methods for nanoscale visualization, as well as describing a range of fascinating in-depth studies. Introductory chapters cover the most relevant physics and basic methods that young researchers need to master in order to work effectively in the field of nanoscale photonic imaging, from physical first principles, to instrumentation, to mathematical foundations of imaging and data analysis. Subsequent chapters demonstrate how these cutting edge methods are applied to a variety of systems, including complex fluids and biomolecular systems, for visualizing their structure and dynamics, in space and on timescales extending over many orders of magnitude down to the femtosecond range. Progress in nanoscale photonic imaging in Göttingen has been the sum total of more than a decade of work by a wide range of scientists and mathematicians across disciplines, working together in a vibrant collaboration of a kind rarely matched. This volume presents the highlights of their research achievements and serves as a record of the unique and remarkable constellation of contributors, as well as looking ahead at the future prospects in this field. It will serve not only as a useful reference for experienced researchers but also as a valuable point of entry for newcomers.

Three-Dimensional X-Ray Diffraction Microscopy

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Publisher : Springer
ISBN 13 : 9783662145425
Total Pages : 172 pages
Book Rating : 4.1/5 (454 download)

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Book Synopsis Three-Dimensional X-Ray Diffraction Microscopy by : Henning Friis Poulsen

Download or read book Three-Dimensional X-Ray Diffraction Microscopy written by Henning Friis Poulsen and published by Springer. This book was released on 2014-01-15 with total page 172 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Soft X-Ray Diffraction Microscopy of a Frozen Hydrated Yeast Cell

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Publisher :
ISBN 13 :
Total Pages : pages
Book Rating : 4.:/5 (925 download)

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Book Synopsis Soft X-Ray Diffraction Microscopy of a Frozen Hydrated Yeast Cell by :

Download or read book Soft X-Ray Diffraction Microscopy of a Frozen Hydrated Yeast Cell written by and published by . This book was released on 2009 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: We report the first image of an intact, frozen hydrated eukaryotic cell using x-ray diffraction microscopy, or coherent x-ray diffraction imaging. By plunge freezing the specimen in liquid ethane and maintaining it below -170 °C, artifacts due to dehydration, ice crystallization, and radiation damage are greatly reduced. In this example, coherent diffraction data using 520 eV x rays were recorded and reconstructed to reveal a budding yeast cell at a resolution better than 25 nm. This demonstration represents an important step towards high resolution imaging of cells in their natural, hydrated state, without limitations imposed by x-ray optics.

Synchrotron Radiation and Structural Proteomics

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Publisher : CRC Press
ISBN 13 : 9814267937
Total Pages : 514 pages
Book Rating : 4.8/5 (142 download)

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Book Synopsis Synchrotron Radiation and Structural Proteomics by : Eugenia Pechkova

Download or read book Synchrotron Radiation and Structural Proteomics written by Eugenia Pechkova and published by CRC Press. This book was released on 2011-11-11 with total page 514 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents an overview of the current state of research in both synchrotron radiation and structural proteomics from different laboratories worldwide. The book presents recent research results in the most advanced methods of synchrotron radiation analysis, protein micro- and nano crystallography, X-ray scattering and X-ray optics, coherent