Tea Genome And Genetics

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Tea: Genome and Genetics

Author : Tapan Kumar Mondal
Publisher : Springer Nature
ISBN 13 : 9811588686
Total Pages : 332 pages
Book Rating : 4.8/5 (115 download)

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Book Synopsis Tea: Genome and Genetics by : Tapan Kumar Mondal

Download or read book Tea: Genome and Genetics written by Tapan Kumar Mondal and published by Springer Nature. This book was released on 2020-12-22 with total page 332 pages. Available in PDF, EPUB and Kindle. Book excerpt: Tea is an important non-alcoholic beverage plant of the world. Cultivation of tea is also commercially very important as it earns huge revenue for the tea growing nations especially the developing countries such as India. Although conventional breeding is well-established and contributes significantly for varietal improvement of this plant and other Camellia species with ornamental value, yet, applications of biotechnology vis a vis genomics are essential to improve the productivity and quality of the tea. This book brings out various aspects of breeding, biotechnology and genomics of tea plants. It covers i) Origin and descriptions of health benefits as well as morphological classification as first chapter, ii) Breeding and cytogenetics that comprise with various conventional approaches of varietal improvement of tea along with their genetic resources, iii) Micro-propagation which deals with in-depth study of clonal propagation, iv) Somatic embryogenesis along with alternative techniques such as suspension culture, cry-preservation etc, v) Molecular breeding that deals with application of various DNA based markers such as discovery of QTL, linkage map etc, vi) Genetic transformation and associated factors, vii) Stress physiology complied various works done in tea along with its wild relatives on abiotic as well as biotic stress and viii) Functional genomics that describes the various works of molecular cloning and characterizations, differential gene expression, high-throughput sequencing, bioinformatics transcriptomics study that described the application of next generation sequencing to discover various genes that are related to various trait of tea, Non-coding RNA which describes the discovery of various non-coding RNA in tea and related genera. The book also discusses recent developments in biotechnology such as metabolomics, proteomics, genome sequence and popular clone varieties of tea crops that are developed across the world. In conclusion, the book collates the work on tea plantations so far, identified the problems, analyzes the gaps on breeding and biotechnological works of tea as well as its wild species and discusses the future scopes as conclusion. The book aims to cover all latest information till june, 2020 . It will be useful resource for post-graduate, doctoral as well post-doctoral students working on tea as well as other woody plants. This will also be useful for the scientists working in the areas of life sciences, genomics, biotechnology and molecular biology.

The Tea Plant Genome

Author : Liang Chen
Publisher : Springer
ISBN 13 : 9789819706792
Total Pages : 0 pages
Book Rating : 4.7/5 (67 download)

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Book Synopsis The Tea Plant Genome by : Liang Chen

Download or read book The Tea Plant Genome written by Liang Chen and published by Springer. This book was released on 2024-05-28 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: This edited volume is focused on genomic study of tea crop. This book includes 20 chapters that cover the most relevant and hot topics in tea plant genetics and genomics. A first set of chapters includes its global economic and healthy importance, the botany and taxonomy, main quality and functional components. A second group of chapters deals with genetics, breeding and includes genetic resources, commercial breeding, genetic transformation techniques, as well as the use of marker assisted selection (QTL, GWAS). This will be followed by a set of chapters on omics, including the genomics, transcriptomics, metabolomics, proteomics, organelle genome, small RNA and DNA methylation. Two chapters are devoted to biotic and abiotic stresses, continued by two others more chapters focused on the SNP array, and databases for molecular design breeding. Finally, a chapter deals with future perspectives in the omics era for tea breeding. The tea plant is a cross-pollinated, self-incompatible, high heterozygosity, very large genome (~3.2 Gb) which have greatly hindered research and breeding in this crop. In the recent years, modern genetic and genomic tools have contributed to the development of significant valuable resources for the tea genetic improvement. This book is of interest to teachers, tea researchers, tea breeders and tea lovers. Also, the book serves as additional reading material for undergraduate and graduate students of agriculture, forestry, horticulture, beverage plant sciences.

Global Tea Breeding

Author : Liang Chen
Publisher : Springer Science & Business Media
ISBN 13 : 3642318789
Total Pages : 400 pages
Book Rating : 4.6/5 (423 download)

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Book Synopsis Global Tea Breeding by : Liang Chen

Download or read book Global Tea Breeding written by Liang Chen and published by Springer Science & Business Media. This book was released on 2013-08-31 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: Global Tea Breeding: Achievements, Challenges and Perspectives provides a global review on biodiversity and biotechnology issues in tea breeding and selection. The contributions are written by experts from China, India, Kenya, Sri Lanka, Vietnam, Turkey, Indonesia, Japan, Bangladesh, Korea, Nigeria, and etc., which countries amount to 90% of the world tea production. This book focuses on the germplasm, breeding and selection of tea cultivars for the production of black, green and Oolong teas from the tea plant, Camellia sinensis (L.) O. Kuntze. It can benefit the tea breeders in the global tea industry, as well as the breeders of other woody cash crops like coffee and other sub-tropical fruit trees. Liang Chen is a Professor and Associate Director at National Center for Tea Improvement, Tea Research Institute of the Chinese Academy of Agricultural Sciences (TRICAAS), Hangzhou, China. Zeno Apostolides is a Professor at the Department of Biochemistry, University of Pretoria, South Africa. Zong-Mao Chen is the Academician of the Chinese Academy of Engineering and a Professor at the Tea Research Institute of the Chinese Academy of Agricultural Sciences, Hangzhou, China.

HiC-Pro: an Optimized and Flexible Pipeline for Hi-C Data Processing

Author : Oldenburg Oldenburg Press
Publisher :
ISBN 13 : 9781523764426
Total Pages : 40 pages
Book Rating : 4.7/5 (644 download)

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Book Synopsis HiC-Pro: an Optimized and Flexible Pipeline for Hi-C Data Processing by : Oldenburg Oldenburg Press

Download or read book HiC-Pro: an Optimized and Flexible Pipeline for Hi-C Data Processing written by Oldenburg Oldenburg Press and published by . This book was released on 2016-01-29 with total page 40 pages. Available in PDF, EPUB and Kindle. Book excerpt: HiC-Pro is an optimized and flexible pipeline for processing Hi-C data from raw reads to normalized contact maps. HiC-Pro maps reads, detects valid ligation products, performs quality controls and generates intra- and inter-chromosomal contact maps. It includes a fast implementation of the iterative correction method and is based on a memory-efficient data format for Hi-C contact maps. In addition, HiC-Pro can use phased genotype data to build allele-specific contact maps. We applied HiC-Pro to different Hi-C datasets, demonstrating its ability to easily process large data in a reasonable time. Source code and documentation are available at http://github.com/nservant/HiC-Pro.

Tea

Author : K.C. Willson
Publisher : Springer Science & Business Media
ISBN 13 : 9401123268
Total Pages : 780 pages
Book Rating : 4.4/5 (11 download)

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Book Synopsis Tea by : K.C. Willson

Download or read book Tea written by K.C. Willson and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 780 pages. Available in PDF, EPUB and Kindle. Book excerpt: Tea is a unique crop and, incidentally, a very interesting and attractive one. The tea bush, its cultivation and harvesting do not fit into any typical cropping pattern. Moreover, its processing and marketing are specific to tea. Thus the Tea Industry stands apart and constitutes a self contained entity. This is reflected in the title given to this book, Tea: Cultivation to consumption, and its treatment of the subject. The book is logically planned - starting with the plant itself and finishing with the traditional'cuppa'. Every aspect of tea production is covered, inevitably some in greater detail than others. However, it gives an authentic and comprehensive picture of the tea industry. The text deals in detail with cultural practices and research, where desirable, on a regional basis. The technology of tea cultivation and processing has been developed within the industry, aided by applied research which was largely financed by the tea companies themselves. This contributed to a technically competent industry but tended to bypass the more academic and fundamental investigations which might bring future rewards. The sponsorship of research has now widened and the range and depth of tea research has increased accordingly. The editors and authors of this book have played their part in these recent developments which are well reported in the book.

The Kiwifruit Genome

Author : Raffaele Testolin
Publisher : Springer
ISBN 13 : 3319322745
Total Pages : 269 pages
Book Rating : 4.3/5 (193 download)

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Book Synopsis The Kiwifruit Genome by : Raffaele Testolin

Download or read book The Kiwifruit Genome written by Raffaele Testolin and published by Springer. This book was released on 2016-05-02 with total page 269 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the basic botanical features of kiwifruit and its wild relatives, reports on the steps that led to its genome sequencing, and discusses the results obtained with the assembly and annotation. The core chapters provide essential insights into the main gene families that characterize this species as a crop, including the genes controlling sugar and starch metabolism, pigment biosynthesis and degradation, the ascorbic-acid pathway, fruit softening and postharvest metabolism, allergens, and resistance to pests and diseases. The book offers a valuable reference guide for taxonomists, geneticists and horticulturists. Further, since information gained from the genome sequence is extraordinarily useful in assessing the breeding value of individuals based on whole-genome scans, it will especially benefit plant breeders. Accordingly, chapters are included that focus on gene introgression from wild relatives and genome-based breeding.

Breeding and Biotechnology of Tea and its Wild Species

Author : Tapan Kumar Mondal
Publisher : Springer Science & Business Media
ISBN 13 : 8132217047
Total Pages : 179 pages
Book Rating : 4.1/5 (322 download)

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Book Synopsis Breeding and Biotechnology of Tea and its Wild Species by : Tapan Kumar Mondal

Download or read book Breeding and Biotechnology of Tea and its Wild Species written by Tapan Kumar Mondal and published by Springer Science & Business Media. This book was released on 2014-02-10 with total page 179 pages. Available in PDF, EPUB and Kindle. Book excerpt: Tea is an important non-alcoholic beverage plant of the world. Cultivation of tea is very important as it earns revenue for the tea growing nations especially the developing countries such as India. Although conventional breeding is well-established and has contributed significantly for varietal improvement of this plant and other Camellia species with ornamental value, yet applications of biotechnology are required to intervene some of the issues where conventional breeding is restricted particularly for woody plants such as tea. It is note-worthy to mention that some amounts of biotechnology works in several facets of tea and its wild species have also been done. In the present book, a state-of-the-art on various aspects of breeding and biotechnology has been complied in eight chapters. They are: i) Origin and descriptions of health benefits as well as morphological classification as first chapter, ii) Breeding and cytogenetics that comprise with various conventional approaches of varietal improvement of tea along with their genetic resources, iii) Micropropagation which deals with in-depth study of clonal propagation, iv) Somatic embryogenesis along with alternative techniques such as suspension culture, cry-preservation etc. v) Molecular breeding that deals with application of various DNA-based markers, linkage map etc., vi) Genetic transformation and associated factors, vii) Stress physiology complied with various works done in tea along with its wild relatives on abiotic as well as biotic stress, and viii) Functional genomics that describe the various works of molecular cloning and characterizations, differential gene expression, high-throughput sequencing, bioinformatics etc. Importantly, the author has made exclusive tables in most of the chapters that include the summary of the works in particular topic. In a nutshell, the book compiles the work already been done, identifies the problems, analyzes the gaps on breeding and biotechnological works of tea as well as its wild species and discusses the future scope as conclusion. Every effort has been made to include all the published works till June 2013. The book will be a useful resource for post-graduate, doctoral as well post-doctoral students working on tea as well as other woody plants. This will also be useful for the scientists working in the areas of life sciences, genomics, biotechnology and molecular biology.

Gene Networks Involved In Water Deficit Stress Response In Tea

Author : Sushmita Gupta
Publisher : LAP Lambert Academic Publishing
ISBN 13 : 9783659290251
Total Pages : 264 pages
Book Rating : 4.2/5 (92 download)

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Book Synopsis Gene Networks Involved In Water Deficit Stress Response In Tea by : Sushmita Gupta

Download or read book Gene Networks Involved In Water Deficit Stress Response In Tea written by Sushmita Gupta and published by LAP Lambert Academic Publishing. This book was released on 2012 with total page 264 pages. Available in PDF, EPUB and Kindle. Book excerpt: The tea industry is India's main net foreign exchange earner and source of income for the majority of laborers'. Tea yield is greatly influenced by weather, and especially by drought, which causes irreparable losses because irrigation is seldom used on tea plantations. Understanding the genes that govern tea plant architecture and response to drought stress is urgently needed to enhance breeding in tea with improved water use efficiency. This book discusses the various aspects of adverse effects of climate change on Indian tea industry and put forward functional genomics and molecular breeding strategies to improve abiotic stress tolerance. We identified a set of drought responsive genes under controlled condition using cDNA AFLP and SSH and validated the identified genes and their pattern of expression under field drought condition. Our data provides valuable information for the gene components and the dynamics of gene expression in second and third leaf against drought stress in tea, which could be regarded as candidate target molecular markers potentially associated with drought tolerance.

Stress Physiology of Tea in the Face of Climate Change

Author : Wen-Yan Han
Publisher : Springer
ISBN 13 : 981132140X
Total Pages : 361 pages
Book Rating : 4.8/5 (113 download)

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Book Synopsis Stress Physiology of Tea in the Face of Climate Change by : Wen-Yan Han

Download or read book Stress Physiology of Tea in the Face of Climate Change written by Wen-Yan Han and published by Springer. This book was released on 2018-11-23 with total page 361 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book focuses on the existing knowledge regarding the effect of global climate change on tea plant physiology, biochemistry, and metabolism as well as economic and societal aspects of the tea industry. Specifically, this book synthesizes recent advances in the physiological and molecular mechanisms of the responses of tea plants to various abiotic and biotic stressors including high temperature, low temperature or freezing, drought, low light, UV radiation, elevated CO2, ozone, nutrient deficiency, insect herbivory, and pathogenic agents. This book also discusses challenges and potential management strategies for sustaining tea yield and quality in the face of climate change. Dr. Wen-Yan Han is a Professor and Dr. Xin Li is an Associate Professor at the Tea Research Institute of the Chinese Academy of Agricultural Sciences (TRI, CAAS), Hangzhou, PR China. Dr. Golam Jalal Ahammed is an Associate Professor at the Department of Horticulture, College of Forestry, Henan University of Science and Technology, Luoyang, PR China.

Genomics of Cultivated Palms

Author : V Arunachalam
Publisher : Elsevier
ISBN 13 : 0123877520
Total Pages : 114 pages
Book Rating : 4.1/5 (238 download)

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Book Synopsis Genomics of Cultivated Palms by : V Arunachalam

Download or read book Genomics of Cultivated Palms written by V Arunachalam and published by Elsevier. This book was released on 2011-12-01 with total page 114 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioinformatics offers novel tools and resources to analyze plant genomes and genes. The complete genomes of two important commercial palms (dates and oil palm) have recently been sequenced. This offers scope for many computational tools to decipher the synteny, collinearity and common and unique genes of palms. This book reviews the latest developments in this field. Includes the latest information on the molecular breeding and bioinformatics of palms Covers past and current work and future opportunities Written in simple language avoiding technical jargon

Auxin and Its Role in Plant Development

Author : Eva Zažímalová
Publisher : Springer
ISBN 13 : 3709115264
Total Pages : 442 pages
Book Rating : 4.7/5 (91 download)

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Book Synopsis Auxin and Its Role in Plant Development by : Eva Zažímalová

Download or read book Auxin and Its Role in Plant Development written by Eva Zažímalová and published by Springer. This book was released on 2014-06-26 with total page 442 pages. Available in PDF, EPUB and Kindle. Book excerpt: Auxin is an important signaling compound in plants and vital for plant development and growth. The present book, Auxin and its Role in Plant Development, provides the reader with detailed and comprehensive insight into the functioning of the molecule on the whole and specifically in plant development. In the first part, the functioning, metabolism and signaling pathways of auxin in plants are explained, the second part depicts the specific role of auxin in plant development and the third part describes the interaction and functioning of the signaling compound upon stimuli of the environment. Each chapter is written by international experts in the respective field and designed for scientists and researchers in plant biology, plant development and cell biology to summarize the recent progress in understanding the role of auxin and suggest future perspectives for auxin research.

Advances on Genomics and Genetics of Horticultural Crops and their Contribution to Breeding Efforts, volume II

Author : Eleni Tani
Publisher : Frontiers Media SA
ISBN 13 : 2832545696
Total Pages : 167 pages
Book Rating : 4.8/5 (325 download)

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Book Synopsis Advances on Genomics and Genetics of Horticultural Crops and their Contribution to Breeding Efforts, volume II by : Eleni Tani

Download or read book Advances on Genomics and Genetics of Horticultural Crops and their Contribution to Breeding Efforts, volume II written by Eleni Tani and published by Frontiers Media SA. This book was released on 2024-03-06 with total page 167 pages. Available in PDF, EPUB and Kindle. Book excerpt: Horticultural crops are an excellent source of vitamins, antioxidants, and fibers that play an important role in human health. The discovery of modern genomic tools, the continuous generation of genomic data, and the application of comparative and functional genomics are high importance innovations with numerous applications in crop breeding. The utilization of all these new techniques in combination with the analysis of genomic data using bioinformatics tools, contribute to a better understanding of the function of various agronomic traits of interest as well as horticultural crops breeding. Over the last few years, novel genome editing tools such as the CRISPR-Cas9, have been developed and revolutionized molecular technologies due to their simplicity, high efficiency, and specificity.

Plant Breeding Reviews, Volume 44

Author :
Publisher : John Wiley & Sons
ISBN 13 : 1119716950
Total Pages : 336 pages
Book Rating : 4.1/5 (197 download)

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Book Synopsis Plant Breeding Reviews, Volume 44 by :

Download or read book Plant Breeding Reviews, Volume 44 written by and published by John Wiley & Sons. This book was released on 2020-11-10 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plant Breeding Reviews presents state-of-the-art reviews on plant genetics and the breeding of all types of crops by both traditional means and molecular methods. Many of the crops widely grown today stem from a very narrow genetic base; understanding and preserving crop genetic resources is vital to the security of food systems worldwide. The emphasis of the series is on methodology, a fundamental understanding of crop genetics, and applications to major crops.

The Tomato Genome

Author : Mathilde Causse
Publisher : Springer
ISBN 13 : 3662533898
Total Pages : 259 pages
Book Rating : 4.6/5 (625 download)

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Book Synopsis The Tomato Genome by : Mathilde Causse

Download or read book The Tomato Genome written by Mathilde Causse and published by Springer. This book was released on 2016-11-21 with total page 259 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book describes the strategy used for sequencing, assembling and annotating the tomato genome and presents the main characteristics of this sequence with a special focus on repeated sequences and the ancestral polyploidy events. It also includes the chloroplast and mitochondrial genomes. Tomato (Solanum lycopersicum) is a major crop plant as well as a model for fruit development, and the availability of the genome sequence has completely changed the paradigm of the species’ genetics and genomics. The book describes the numerous genetic and genomic resources available, the identified genes and quantitative trait locus (QTL) identified, as well as the strong synteny across Solanaceae species. Lastly, it discusses the consequences of the availability of a high-quality genome sequence of the cultivated species for the research community. It is a valuable resource for students and researchers interested in the genetics and genomics of tomato and Solanaceae.

Oil Palm Breeding

Author : Aik Chin Soh
Publisher : CRC Press
ISBN 13 : 1498715451
Total Pages : 465 pages
Book Rating : 4.4/5 (987 download)

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Book Synopsis Oil Palm Breeding by : Aik Chin Soh

Download or read book Oil Palm Breeding written by Aik Chin Soh and published by CRC Press. This book was released on 2017-08-14 with total page 465 pages. Available in PDF, EPUB and Kindle. Book excerpt: The oil palm is a remarkable crop, producing around 40% of the world’s vegetable oil from around 6% of the land devoted to oil crops. Conventional breeding has clearly been the major focus of genetic improvement in this crop. A mix of improved agronomy and management, coupled with breeding selection have quadrupled the oil yield of the crop since breeding began in earnest in the 1920s. However, as for all perennial crops with long breeding cycles, oil palm faces immense challenges in the coming years with increased pressure from population growth, climate change and the need to develop environmentally sustainable oil palm plantations. In Oil Palm: Breeding, Genetics and Genomics, world leading organizations and individuals who have been at the forefront of developments in this crop, provide their insights and experiences of oil palm research, while examining the different challenges that face the future of the oil palm. The editors have all been involved in research and breeding of oil palm for many years and use their knowledge of the crop and their disciplinary expertise to provide context and to introduce the different research topics covered.

Nutritional Genomics

Author : Wayne R. Bidlack
Publisher : CRC Press
ISBN 13 : 1439844534
Total Pages : 448 pages
Book Rating : 4.4/5 (398 download)

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Book Synopsis Nutritional Genomics by : Wayne R. Bidlack

Download or read book Nutritional Genomics written by Wayne R. Bidlack and published by CRC Press. This book was released on 2016-04-19 with total page 448 pages. Available in PDF, EPUB and Kindle. Book excerpt: The notion of matching diet with an individual's genetic makeup is transforming the way the public views nutrition as a means of managing health and preventing disease. To fulfill the promise of nutritional genomics, researchers are beginning to reconcile the diverse properties of dietary factors with our current knowledge of genome structure and g

Genetics, Genomics, and Breeding of Tomato

Author : Barbara E. Liedl
Publisher : CRC Press
ISBN 13 : 1578088046
Total Pages : 522 pages
Book Rating : 4.5/5 (78 download)

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Book Synopsis Genetics, Genomics, and Breeding of Tomato by : Barbara E. Liedl

Download or read book Genetics, Genomics, and Breeding of Tomato written by Barbara E. Liedl and published by CRC Press. This book was released on 2013-01-17 with total page 522 pages. Available in PDF, EPUB and Kindle. Book excerpt: This volume covers the advances in the study of tomato diversity and taxonomy. It examines the mapping of simple and complex traits, classical genetics and breeding, association studies, molecular breeding, positional cloning, and structural and comparative genomics. The contributors also discuss transcriptomics, proteomics, metabolomics, and bioinformatics. The information in this book will be useful to researchers working on other Solanaceaous crops as well as those interested in using the tomato as a model crop species.