Scalable Big Data Analytics for Protein Bioinformatics

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Publisher :
ISBN 13 : 9783319988405
Total Pages : pages
Book Rating : 4.9/5 (884 download)

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Book Synopsis Scalable Big Data Analytics for Protein Bioinformatics by : Dariusz Mrozek

Download or read book Scalable Big Data Analytics for Protein Bioinformatics written by Dariusz Mrozek and published by . This book was released on 2018 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents a focus on proteins and their structures. The text describes various scalable solutions for protein structure similarity searching, carried out at main representation levels and for prediction of 3D structures of proteins. Emphasis is placed on techniques that can be used to accelerate similarity searches and protein structure modeling processes. The content of the book is divided into four parts. The first part provides background information on proteins and their representation levels, including a formal model of a 3D protein structure used in computational processes, and a brief overview of the technologies used in the solutions presented in the book. The second part of the book discusses Cloud services that are utilized in the development of scalable and reliable cloud applications for 3D protein structure similarity searching and protein structure prediction. The third part of the book shows the utilization of scalable Big Data computational frameworks, like Hadoop and Spark, in massive 3D protein structure alignments and identification of intrinsically disordered regions in protein structures. The fourth part of the book focuses on finding 3D protein structure similarities, accelerated with the use of GPUs and the use of multithreading and relational databases for efficient approximate searching on protein secondary structures. The book introduces advanced techniques and computational architectures that benefit from recent achievements in the field of computing and parallelism. Recent developments in computer science have allowed algorithms previously considered too time-consuming to now be efficiently used for applications in bioinformatics and the life sciences. Given its depth of coverage, the book will be of interest to researchers and software developers working in the fields of structural bioinformatics and biomedical databases.

Scalable Big Data Analytics for Protein Bioinformatics

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Publisher : Springer
ISBN 13 : 3319988395
Total Pages : 331 pages
Book Rating : 4.3/5 (199 download)

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Book Synopsis Scalable Big Data Analytics for Protein Bioinformatics by : Dariusz Mrozek

Download or read book Scalable Big Data Analytics for Protein Bioinformatics written by Dariusz Mrozek and published by Springer. This book was released on 2018-09-25 with total page 331 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents a focus on proteins and their structures. The text describes various scalable solutions for protein structure similarity searching, carried out at main representation levels and for prediction of 3D structures of proteins. Emphasis is placed on techniques that can be used to accelerate similarity searches and protein structure modeling processes. The content of the book is divided into four parts. The first part provides background information on proteins and their representation levels, including a formal model of a 3D protein structure used in computational processes, and a brief overview of the technologies used in the solutions presented in the book. The second part of the book discusses Cloud services that are utilized in the development of scalable and reliable cloud applications for 3D protein structure similarity searching and protein structure prediction. The third part of the book shows the utilization of scalable Big Data computational frameworks, like Hadoop and Spark, in massive 3D protein structure alignments and identification of intrinsically disordered regions in protein structures. The fourth part of the book focuses on finding 3D protein structure similarities, accelerated with the use of GPUs and the use of multithreading and relational databases for efficient approximate searching on protein secondary structures. The book introduces advanced techniques and computational architectures that benefit from recent achievements in the field of computing and parallelism. Recent developments in computer science have allowed algorithms previously considered too time-consuming to now be efficiently used for applications in bioinformatics and the life sciences. Given its depth of coverage, the book will be of interest to researchers and software developers working in the fields of structural bioinformatics and biomedical databases.

Big Data Analytics in Chemoinformatics and Bioinformatics

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Publisher : Elsevier
ISBN 13 : 0323857140
Total Pages : 503 pages
Book Rating : 4.3/5 (238 download)

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Book Synopsis Big Data Analytics in Chemoinformatics and Bioinformatics by : Subhash C. Basak

Download or read book Big Data Analytics in Chemoinformatics and Bioinformatics written by Subhash C. Basak and published by Elsevier. This book was released on 2022-12-06 with total page 503 pages. Available in PDF, EPUB and Kindle. Book excerpt: Big Data Analytics in Chemoinformatics and Bioinformatics: With Applications to Computer-Aided Drug Design, Cancer Biology, Emerging Pathogens and Computational Toxicology provides an up-to-date presentation of big data analytics methods and their applications in diverse fields. The proper management of big data for decision-making in scientific and social issues is of paramount importance. This book gives researchers the tools they need to solve big data problems in these fields. It begins with a section on general topics that all readers will find useful and continues with specific sections covering a range of interdisciplinary applications. Here, an international team of leading experts review their respective fields and present their latest research findings, with case studies used throughout to analyze and present key information. Brings together the current knowledge on the most important aspects of big data, including analysis using deep learning and fuzzy logic, transparency and data protection, disparate data analytics, and scalability of the big data domain Covers many applications of big data analysis in diverse fields such as chemistry, chemoinformatics, bioinformatics, computer-assisted drug/vaccine design, characterization of emerging pathogens, and environmental protection Highlights the considerable benefits offered by big data analytics to science, in biomedical fields and in industry

Big Data Analytics

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Publisher : Springer Nature
ISBN 13 : 3031556399
Total Pages : 299 pages
Book Rating : 4.0/5 (315 download)

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Book Synopsis Big Data Analytics by : Ümit Demirbaga

Download or read book Big Data Analytics written by Ümit Demirbaga and published by Springer Nature. This book was released on with total page 299 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Machine Learning Techniques on Gene Function Prediction Volume II

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Publisher : Frontiers Media SA
ISBN 13 : 2889766322
Total Pages : 264 pages
Book Rating : 4.8/5 (897 download)

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Book Synopsis Machine Learning Techniques on Gene Function Prediction Volume II by : Quan Zou

Download or read book Machine Learning Techniques on Gene Function Prediction Volume II written by Quan Zou and published by Frontiers Media SA. This book was released on 2023-04-11 with total page 264 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Beyond Databases, Architectures and Structures. Paving the Road to Smart Data Processing and Analysis

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Publisher : Springer
ISBN 13 : 3030190935
Total Pages : 372 pages
Book Rating : 4.0/5 (31 download)

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Book Synopsis Beyond Databases, Architectures and Structures. Paving the Road to Smart Data Processing and Analysis by : Stanisław Kozielski

Download or read book Beyond Databases, Architectures and Structures. Paving the Road to Smart Data Processing and Analysis written by Stanisław Kozielski and published by Springer. This book was released on 2019-05-07 with total page 372 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the refereed proceedings of the 15th International Conference entitled Beyond Databases, Architectures and Structures, BDAS 2019, held in Ustroń, Poland, in May 2019. It consists of 26 carefully reviewed papers selected from 69 submissions. The papers are organized in topical sections, namely big data and cloud computing; architectures, structures and algorithms for efficient data processing and analysis; artificial intelligence, data mining and knowledge discovery; image analysis and multimedia mining; bioinformatics and biomedical data analysis; industrial applications; networks and security.

Big Data Analytics in Bioinformatics and Healthcare

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Publisher : IGI Global
ISBN 13 : 1466666129
Total Pages : 552 pages
Book Rating : 4.4/5 (666 download)

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Book Synopsis Big Data Analytics in Bioinformatics and Healthcare by : Wang, Baoying

Download or read book Big Data Analytics in Bioinformatics and Healthcare written by Wang, Baoying and published by IGI Global. This book was released on 2014-10-31 with total page 552 pages. Available in PDF, EPUB and Kindle. Book excerpt: As technology evolves and electronic data becomes more complex, digital medical record management and analysis becomes a challenge. In order to discover patterns and make relevant predictions based on large data sets, researchers and medical professionals must find new methods to analyze and extract relevant health information. Big Data Analytics in Bioinformatics and Healthcare merges the fields of biology, technology, and medicine in order to present a comprehensive study on the emerging information processing applications necessary in the field of electronic medical record management. Complete with interdisciplinary research resources, this publication is an essential reference source for researchers, practitioners, and students interested in the fields of biological computation, database management, and health information technology, with a special focus on the methodologies and tools to manage massive and complex electronic information.

Machine Learning Techniques on Gene Function Prediction

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Publisher : Frontiers Media SA
ISBN 13 : 2889632148
Total Pages : 485 pages
Book Rating : 4.8/5 (896 download)

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Book Synopsis Machine Learning Techniques on Gene Function Prediction by : Quan Zou

Download or read book Machine Learning Techniques on Gene Function Prediction written by Quan Zou and published by Frontiers Media SA. This book was released on 2019-12-04 with total page 485 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Computational Science – ICCS 2020

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Publisher : Springer Nature
ISBN 13 : 3030504263
Total Pages : 618 pages
Book Rating : 4.0/5 (35 download)

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Book Synopsis Computational Science – ICCS 2020 by : Valeria V. Krzhizhanovskaya

Download or read book Computational Science – ICCS 2020 written by Valeria V. Krzhizhanovskaya and published by Springer Nature. This book was released on 2020-06-18 with total page 618 pages. Available in PDF, EPUB and Kindle. Book excerpt: The seven-volume set LNCS 12137, 12138, 12139, 12140, 12141, 12142, and 12143 constitutes the proceedings of the 20th International Conference on Computational Science, ICCS 2020, held in Amsterdam, The Netherlands, in June 2020.* The total of 101 papers and 248 workshop papers presented in this book set were carefully reviewed and selected from 719 submissions (230 submissions to the main track and 489 submissions to the workshops). The papers were organized in topical sections named: Part I: ICCS Main Track Part II: ICCS Main Track Part III: Track of Advances in High-Performance Computational Earth Sciences: Applications and Frameworks; Track of Agent-Based Simulations, Adaptive Algorithms and Solvers; Track of Applications of Computational Methods in Artificial Intelligence and Machine Learning; Track of Biomedical and Bioinformatics Challenges for Computer Science Part IV: Track of Classifier Learning from Difficult Data; Track of Complex Social Systems through the Lens of Computational Science; Track of Computational Health; Track of Computational Methods for Emerging Problems in (Dis-)Information Analysis Part V: Track of Computational Optimization, Modelling and Simulation; Track of Computational Science in IoT and Smart Systems; Track of Computer Graphics, Image Processing and Artificial Intelligence Part VI: Track of Data Driven Computational Sciences; Track of Machine Learning and Data Assimilation for Dynamical Systems; Track of Meshfree Methods in Computational Sciences; Track of Multiscale Modelling and Simulation; Track of Quantum Computing Workshop Part VII: Track of Simulations of Flow and Transport: Modeling, Algorithms and Computation; Track of Smart Systems: Bringing Together Computer Vision, Sensor Networks and Machine Learning; Track of Software Engineering for Computational Science; Track of Solving Problems with Uncertainties; Track of Teaching Computational Science; Track of UNcErtainty QUantIficatiOn for ComputationAl modeLs *The conference was canceled due to the COVID-19 pandemic.

Big Data Analytics in Genomics

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Publisher : Springer
ISBN 13 : 3319412795
Total Pages : 426 pages
Book Rating : 4.3/5 (194 download)

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Book Synopsis Big Data Analytics in Genomics by : Ka-Chun Wong

Download or read book Big Data Analytics in Genomics written by Ka-Chun Wong and published by Springer. This book was released on 2016-10-24 with total page 426 pages. Available in PDF, EPUB and Kindle. Book excerpt: This contributed volume explores the emerging intersection between big data analytics and genomics. Recent sequencing technologies have enabled high-throughput sequencing data generation for genomics resulting in several international projects which have led to massive genomic data accumulation at an unprecedented pace. To reveal novel genomic insights from this data within a reasonable time frame, traditional data analysis methods may not be sufficient or scalable, forcing the need for big data analytics to be developed for genomics. The computational methods addressed in the book are intended to tackle crucial biological questions using big data, and are appropriate for either newcomers or veterans in the field.This volume offers thirteen peer-reviewed contributions, written by international leading experts from different regions, representing Argentina, Brazil, China, France, Germany, Hong Kong, India, Japan, Spain, and the USA. In particular, the book surveys three main areas: statistical analytics, computational analytics, and cancer genome analytics. Sample topics covered include: statistical methods for integrative analysis of genomic data, computation methods for protein function prediction, and perspectives on machine learning techniques in big data mining of cancer. Self-contained and suitable for graduate students, this book is also designed for bioinformaticians, computational biologists, and researchers in communities ranging from genomics, big data, molecular genetics, data mining, biostatistics, biomedical science, cancer research, medical research, and biology to machine learning and computer science. Readers will find this volume to be an essential read for appreciating the role of big data in genomics, making this an invaluable resource for stimulating further research on the topic.

Cooperative Design, Visualization, and Engineering

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Publisher : Springer Nature
ISBN 13 : 3030882071
Total Pages : 361 pages
Book Rating : 4.0/5 (38 download)

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Book Synopsis Cooperative Design, Visualization, and Engineering by : Yuhua Luo

Download or read book Cooperative Design, Visualization, and Engineering written by Yuhua Luo and published by Springer Nature. This book was released on 2021-09-30 with total page 361 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the proceedings of the 18th International Conference on Cooperative Design, Visualization, and Engineering, CDVE 2021, held in October 2021. Due to COVId-19 pandemic the conference was held virtually. The 25 full papers and 9 short papers presented were carefully reviewed and selected from 69 submissions. The achievement, progress and future challenges are reported in areas such as health care, industrial design, banking IT systems, cultural activities support, operational maritime cybersecurity assurance, emotion communication, and social network data analytics.

Biotechnology

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Publisher : Medical Information Science Reference
ISBN 13 : 9781522589037
Total Pages : 0 pages
Book Rating : 4.5/5 (89 download)

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Book Synopsis Biotechnology by : Mehdi Khosrowpour

Download or read book Biotechnology written by Mehdi Khosrowpour and published by Medical Information Science Reference. This book was released on 2019 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Biotechnology can be defined as the manipulation of biological process, systems, and organisms in the production of various products. With applications in a number of fields such as biomedical, chemical, mechanical, and civil engineering, research on the development of biologically inspired materials is essential to further advancement. Biotechnology: Concepts, Methodologies, Tools, and Applications is a vital reference source for the latest research findings on the application of biotechnology in medicine, engineering, agriculture, food production, and other areas. It also examines the economic impacts of biotechnology use. Highlighting a range of topics such as pharmacogenomics, biomedical engineering, and bioinformatics, this multi-volume book is ideally designed for engineers, pharmacists, medical professionals, practitioners, academicians, and researchers interested in the applications of biotechnology.

Applying Big Data Analytics in Bioinformatics and Medicine

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Publisher : IGI Global
ISBN 13 : 1522526080
Total Pages : 492 pages
Book Rating : 4.5/5 (225 download)

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Book Synopsis Applying Big Data Analytics in Bioinformatics and Medicine by : Lytras, Miltiadis D.

Download or read book Applying Big Data Analytics in Bioinformatics and Medicine written by Lytras, Miltiadis D. and published by IGI Global. This book was released on 2017-06-16 with total page 492 pages. Available in PDF, EPUB and Kindle. Book excerpt: Many aspects of modern life have become personalized, yet healthcare practices have been lagging behind in this trend. It is now becoming more common to use big data analysis to improve current healthcare and medicinal systems, and offer better health services to all citizens. Applying Big Data Analytics in Bioinformatics and Medicine is a comprehensive reference source that overviews the current state of medical treatments and systems and offers emerging solutions for a more personalized approach to the healthcare field. Featuring coverage on relevant topics that include smart data, proteomics, medical data storage, and drug design, this publication is an ideal resource for medical professionals, healthcare practitioners, academicians, and researchers interested in the latest trends and techniques in personalized medicine.

Tracking and Preventing Diseases with Artificial Intelligence

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Publisher : Springer Nature
ISBN 13 : 3030767329
Total Pages : 266 pages
Book Rating : 4.0/5 (37 download)

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Book Synopsis Tracking and Preventing Diseases with Artificial Intelligence by : Mayuri Mehta

Download or read book Tracking and Preventing Diseases with Artificial Intelligence written by Mayuri Mehta and published by Springer Nature. This book was released on 2021 with total page 266 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book presents an overview of how machine learning and data mining techniques are used for tracking and preventing diseases. It covers several aspects such as stress level identification of a person from his/her speech, automatic diagnosis of disease from X-ray images, intelligent diagnosis of Glaucoma from clinical eye examination data, prediction of protein-coding genes from big genome data, disease detection through microscopic analysis of blood cells, information retrieval from electronic medical record using named entity recognition approaches, and prediction of drug-target interactions. The book is suitable for computer scientists having a bachelor degree in computer science. The book is an ideal resource as a reference book for teaching a graduate course on AI for Medicine or AI for Health care. Researchers working in the multidisciplinary areas use this book to discover the current developments. Besides its use in academia, this book provides enough details about the state-of-the-art algorithms addressing various biomedical domains, so that it could be used by industry practitioners who want to implement AI techniques to analyze the diseases. Medical institutions use this book as reference material and give tutorials to medical experts on how the advanced AI and ML techniques contribute to the diagnosis and prediction of the diseases.

Systems Modeling: Approaches and Applications

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Publisher : Frontiers Media SA
ISBN 13 : 2889664139
Total Pages : 78 pages
Book Rating : 4.8/5 (896 download)

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Book Synopsis Systems Modeling: Approaches and Applications by : Alberto Jesus Martin

Download or read book Systems Modeling: Approaches and Applications written by Alberto Jesus Martin and published by Frontiers Media SA. This book was released on 2021-01-21 with total page 78 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Transactions on Large-Scale Data- and Knowledge-Centered Systems XLVI

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Publisher : Springer Nature
ISBN 13 : 3662623862
Total Pages : 197 pages
Book Rating : 4.6/5 (626 download)

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Book Synopsis Transactions on Large-Scale Data- and Knowledge-Centered Systems XLVI by : Abdelkader Hameurlain

Download or read book Transactions on Large-Scale Data- and Knowledge-Centered Systems XLVI written by Abdelkader Hameurlain and published by Springer Nature. This book was released on 2020-11-20 with total page 197 pages. Available in PDF, EPUB and Kindle. Book excerpt: The LNCS journal Transactions on Large-Scale Data- and Knowledge-Centered Systems focuses on data management, knowledge discovery, and knowledge processing, which are core and hot topics in computer science. Since the 1990s, the Internet has become the main driving force behind application development in all domains. An increase in the demand for resource sharing (e.g., computing resources, services, metadata, data sources) across different sites connected through networks has led to an evolution of data- and knowledge-management systems from centralized systems to decentralized systems enabling large-scale distributed applications providing high scalability. This, the 46th issue of Transactions on Large-Scale Data- and Knowledge-Centered Systems, contains six fully revised selected regular papers. Topics covered include an elastic framework for genomic data management, medical data cloud federations, temporal pattern mining, scalable schema discovery, load shedding, and selectivity estimation using linked Bayesian networks.

Bioinformatics in Rice Research

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Publisher : Springer Nature
ISBN 13 : 9811639930
Total Pages : 609 pages
Book Rating : 4.8/5 (116 download)

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Book Synopsis Bioinformatics in Rice Research by : Manoj Kumar Gupta

Download or read book Bioinformatics in Rice Research written by Manoj Kumar Gupta and published by Springer Nature. This book was released on 2021-09-24 with total page 609 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an up-to-date review of classic and advanced bioinformatics approaches and their utility in rice research. It summarizes databases and tools for analyzing DNA, proteins and gene expression profiles, mapping genetic variations, annotation of protein and RNA molecules, phylogenetic analysis, and pathway enrichment. In addition, it presents high-throughput technologies that are widely used to provide deep insights into the genetic architecture of important traits in the rice genome. The book subsequently discusses techniques for identifying RNA-protein, DNA-protein interactions, and molecular markers, including SNP and microsatellites, in the contexts of rice breeding and genetics. Lastly, it explores various tools that are used to identify and characterize non-coding RNA in rice and their potential role in rice research.