Microscope Image Processing

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Microscope Image Processing

Author : Qiang Wu
Publisher : Elsevier
ISBN 13 : 0080558542
Total Pages : 585 pages
Book Rating : 4.0/5 (85 download)

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Book Synopsis Microscope Image Processing by : Qiang Wu

Download or read book Microscope Image Processing written by Qiang Wu and published by Elsevier. This book was released on 2010-07-27 with total page 585 pages. Available in PDF, EPUB and Kindle. Book excerpt: Digital image processing, an integral part of microscopy, is increasingly important to the fields of medicine and scientific research. This book provides a unique one-stop reference on the theory, technique, and applications of this technology. Written by leading experts in the field, this book presents a unique practical perspective of state-of-the-art microscope image processing and the development of specialized algorithms. It contains in-depth analysis of methods coupled with the results of specific real-world experiments. Microscope Image Processing covers image digitization and display, object measurement and classification, autofocusing, and structured illumination. Key Features: Detailed descriptions of many leading-edge methods and algorithms In-depth analysis of the method and experimental results, taken from real-life examples Emphasis on computational and algorithmic aspects of microscope image processing Advanced material on geometric, morphological, and wavelet image processing, fluorescence, three-dimensional and time-lapse microscopy, microscope image enhancement, MultiSpectral imaging, and image data management This book is of interest to all scientists, engineers, clinicians, post-graduate fellows, and graduate students working in the fields of biology, medicine, chemistry, pharmacology, and other related fields. Anyone who uses microscopes in their work and needs to understand the methodologies and capabilities of the latest digital image processing techniques will find this book invaluable. Presents a unique practical perspective of state-of-the-art microcope image processing and the development of specialized algorithms Each chapter includes in-depth analysis of methods coupled with the results of specific real-world experiments Co-edited by Kenneth R. Castleman, world-renowned pioneer in digital image processing and author of two seminal textbooks on the subject

Computer Vision for Microscopy Image Analysis

Author : Mei Chen
Publisher : Academic Press
ISBN 13 : 0128149736
Total Pages : 230 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Computer Vision for Microscopy Image Analysis by : Mei Chen

Download or read book Computer Vision for Microscopy Image Analysis written by Mei Chen and published by Academic Press. This book was released on 2020-12-01 with total page 230 pages. Available in PDF, EPUB and Kindle. Book excerpt: Are you a computer scientist working on image analysis? Are you a biologist seeking tools to process the microscopy data from image-based experiments? Computer Vision for Microscopy Image Analysis provides a comprehensive and in-depth discussion of modern computer vision techniques, in particular deep learning, for microscopy image analysis that will advance your efforts. Progress in imaging techniques has enabled the acquisition of large volumes of microscopy data and made it possible to conduct large-scale, image-based experiments for biomedical discovery. The main challenge and bottleneck in such experiments is the conversion of "big visual data" into interpretable information. Visual analysis of large-scale microscopy data is a daunting task. Computer vision has the potential to automate this task. One key advantage is that computers perform analysis more reproducibly and less subjectively than human annotators. Moreover, high-throughput microscopy calls for effective and efficient techniques as there are not enough human resources to advance science by manual annotation. This book articulates the strong need for biologists and computer vision experts to collaborate to overcome the limits of human visual perception, and devotes a chapter each to the major steps in analyzing microscopy images, such as detection and segmentation, classification, tracking, and event detection. Discover how computer vision can automate and enhance the human assessment of microscopy images for discovery Grasp the state-of-the-art approaches, especially deep neural networks Learn where to obtain open-source datasets and software to jumpstart his or her own investigation

Microscope Image Processing

Author : Fatima Merchant
Publisher : Elsevier
ISBN 13 : 0128210494
Total Pages : 526 pages
Book Rating : 4.1/5 (282 download)

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Book Synopsis Microscope Image Processing by : Fatima Merchant

Download or read book Microscope Image Processing written by Fatima Merchant and published by Elsevier. This book was released on 2022-08-30 with total page 526 pages. Available in PDF, EPUB and Kindle. Book excerpt: Microscope Image Processing, Second Edition, introduces the basic fundamentals of image formation in microscopy including the importance of image digitization and display, which are key to quality visualization. Image processing and analysis are discussed in detail to provide readers with the tools necessary to improve the visual quality of images, and to extract quantitative information. Basic techniques such as image enhancement, filtering, segmentation, object measurement, and pattern recognition cover concepts integral to image processing. In addition, chapters on specific modern microscopy techniques such as fluorescence imaging, multispectral imaging, three-dimensional imaging and time-lapse imaging, introduce these key areas with emphasis on the differences among the various techniques. The new edition discusses recent developments in microscopy such as light sheet microscopy, digital microscopy, whole slide imaging, and the use of deep learning techniques for image segmentation and analysis with big data image informatics and management. Microscope Image Processing, Second Edition, is suitable for engineers, scientists, clinicians, post-graduate fellows and graduate students working in bioengineering, biomedical engineering, biology, medicine, chemistry, pharmacology and related fields, who use microscopes in their work and would like to understand the methodologies and capabilities of the latest digital image processing techniques or desire to develop their own image processing algorithms and software for specific applications. Presents a unique practical perspective of state-of-the-art microscope image processing and the development of specialized algorithms Each chapter includes in-depth analysis of methods coupled with the results of specific real-world experiments Co-edited by Kenneth R. Castleman, world-renowned pioneer in digital image processing and author of two seminal textbooks on the subject

The Essential Guide to Image Processing

Author : Alan C. Bovik
Publisher : Academic Press
ISBN 13 : 0080922511
Total Pages : 877 pages
Book Rating : 4.0/5 (89 download)

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Book Synopsis The Essential Guide to Image Processing by : Alan C. Bovik

Download or read book The Essential Guide to Image Processing written by Alan C. Bovik and published by Academic Press. This book was released on 2009-07-08 with total page 877 pages. Available in PDF, EPUB and Kindle. Book excerpt: A complete introduction to the basic and intermediate concepts of image processing from the leading people in the field Up-to-date content, including statistical modeling of natural, anistropic diffusion, image quality and the latest developments in JPEG 2000 This comprehensive and state-of-the art approach to image processing gives engineers and students a thorough introduction, and includes full coverage of key applications: image watermarking, fingerprint recognition, face recognition and iris recognition and medical imaging. "This book combines basic image processing techniques with some of the most advanced procedures. Introductory chapters dedicated to general principles are presented alongside detailed application-orientated ones. As a result it is suitably adapted for different classes of readers, ranging from Master to PhD students and beyond." – Prof. Jean-Philippe Thiran, EPFL, Lausanne, Switzerland "Al Bovik’s compendium proceeds systematically from fundamentals to today’s research frontiers. Professor Bovik, himself a highly respected leader in the field, has invited an all-star team of contributors. Students, researchers, and practitioners of image processing alike should benefit from the Essential Guide." – Prof. Bernd Girod, Stanford University, USA "This book is informative, easy to read with plenty of examples, and allows great flexibility in tailoring a course on image processing or analysis." – Prof. Pamela Cosman, University of California, San Diego, USA A complete and modern introduction to the basic and intermediate concepts of image processing – edited and written by the leading people in the field An essential reference for all types of engineers working on image processing applications Up-to-date content, including statistical modelling of natural, anisotropic diffusion, image quality and the latest developments in JPEG 2000

Computer Processing of Electron Microscope Images

Author : P. W. Hawkes
Publisher : Springer
ISBN 13 : 9783642813832
Total Pages : 296 pages
Book Rating : 4.8/5 (138 download)

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Book Synopsis Computer Processing of Electron Microscope Images by : P. W. Hawkes

Download or read book Computer Processing of Electron Microscope Images written by P. W. Hawkes and published by Springer. This book was released on 2011-12-27 with total page 296 pages. Available in PDF, EPUB and Kindle. Book excerpt: Towards the end of the 1960s, a number of quite different circumstances combined to launch a period of intense activity in the digital processing of electron micro graphs. First, many years of work on correcting the resolution-limiting aberrations of electron microscope objectives had shown that these optical impediments to very high resolution could indeed be overcome, but only at the cost of immense exper imental difficulty; thanks largely to the theoretical work of K. -J. Hanszen and his colleagues and to the experimental work of F. Thon, the notions of transfer func tions were beginning to supplant or complement the concepts of geometrical optics in electron optical thinking; and finally, large fast computers, capable of manipu lating big image matrices in a reasonable time, were widely accessible. Thus the idea that recorded electron microscope images could be improved in some way or rendered more informative by subsequent computer processing gradually gained ground. At first, most effort was concentrated on three-dimensional reconstruction, particu larly of specimens with natural symmetry that could be exploited, and on linear operations on weakly scattering specimens (Chap. l). In 1973, however, R. W. Gerchberg and W. O. Saxton described an iterative algorithm that in principle yielded the phase and amplitude of the electron wave emerging from a strongly scattering speci men.

Computer Techniques for Image Processing in Electron Microscopy

Author : W. O. Saxton
Publisher : Academic Press
ISBN 13 : 1483284646
Total Pages : 302 pages
Book Rating : 4.4/5 (832 download)

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Book Synopsis Computer Techniques for Image Processing in Electron Microscopy by : W. O. Saxton

Download or read book Computer Techniques for Image Processing in Electron Microscopy written by W. O. Saxton and published by Academic Press. This book was released on 2013-11-06 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computer Techniques for Image Processing in Electron Microscopy: Advances in Electronics and Electron Physics presents the sophisticated computer generated in processing the image. This book discusses the development of fast Fourier transform algorithms, which has led to the possibility of achieving a more reliable interpretation of electron micrographs by digital means. Organized into 10 chapters, this book begins with an overview of image formation in which the properties of the linear approximation are included. This text then reviews the available hardware and the basic mathematical methods of image processing in electron microscopy. Other chapters consider the constraints imposed on the image wave function by the objective lens aperture. This book discusses as well the properties of discrete Fourier transforms. The final chapter deals with a particular processing system called the Improc system. This book is a valuable resource for physicists and researcher workers who are interested in the study of image processing.

Scanning Transmission Electron Microscopy

Author : Stephen J. Pennycook
Publisher : Springer Science & Business Media
ISBN 13 : 1441972005
Total Pages : 764 pages
Book Rating : 4.4/5 (419 download)

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Book Synopsis Scanning Transmission Electron Microscopy by : Stephen J. Pennycook

Download or read book Scanning Transmission Electron Microscopy written by Stephen J. Pennycook and published by Springer Science & Business Media. This book was released on 2011-03-24 with total page 764 pages. Available in PDF, EPUB and Kindle. Book excerpt: Scanning transmission electron microscopy has become a mainstream technique for imaging and analysis at atomic resolution and sensitivity, and the authors of this book are widely credited with bringing the field to its present popularity. Scanning Transmission Electron Microscopy(STEM): Imaging and Analysis will provide a comprehensive explanation of the theory and practice of STEM from introductory to advanced levels, covering the instrument, image formation and scattering theory, and definition and measurement of resolution for both imaging and analysis. The authors will present examples of the use of combined imaging and spectroscopy for solving materials problems in a variety of fields, including condensed matter physics, materials science, catalysis, biology, and nanoscience. Therefore this will be a comprehensive reference for those working in applied fields wishing to use the technique, for graduate students learning microscopy for the first time, and for specialists in other fields of microscopy.

Microscope Image Processing

Author : Qiang Wu
Publisher :
ISBN 13 :
Total Pages : 576 pages
Book Rating : 4.:/5 (119 download)

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Book Synopsis Microscope Image Processing by : Qiang Wu

Download or read book Microscope Image Processing written by Qiang Wu and published by . This book was released on 2010 with total page 576 pages. Available in PDF, EPUB and Kindle. Book excerpt: Digital image processing, an integral part of microscopy, is increasingly important to the fields of medicine and scientific research. This book provides a unique one-stop reference on the theory, technique, and applications of this technology.

Computer-Assisted Microscopy

Author : John C. Russ
Publisher : Springer Science & Business Media
ISBN 13 : 1461305632
Total Pages : 461 pages
Book Rating : 4.4/5 (613 download)

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Book Synopsis Computer-Assisted Microscopy by : John C. Russ

Download or read book Computer-Assisted Microscopy written by John C. Russ and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 461 pages. Available in PDF, EPUB and Kindle. Book excerpt: The use of computer-based image analysis systems for all kinds of images, but especially for microscope images, has become increasingly widespread in recent years, as computer power has increased and costs have dropped. Software to perform each of the various tasks described in this book exists now, and without doubt additional algorithms to accomplish these same things more efficiently, and to perform new kinds of image processing, feature discrimination and measurement, will continue to be developed. This is likely to be true particularly in the field of three-dimensional imaging, since new microscopy methods are beginning to be used which can produce such data. It is not the intent of this book to train programmers who will assemble their own computer systems and write their own programs. Most users require only the barest of knowledge about how to use the computer, but the greater their understanding of the various image analysis operations which are possible, their advantages and limitations, the greater the likelihood of success in their application. Likewise, the book assumes little in the way of a mathematical background, but the researcher with a secure knowledge of appropriate statistical tests will find it easier to put some of these methods into real use, and have confidence in the results, than one who has less background and experience. Supplementary texts and courses in statistics, microscopy, and specimen preparation are recommended as necessary.

Bioimage Data Analysis Workflows

Author : Kota Miura
Publisher : Springer Nature
ISBN 13 : 3030223868
Total Pages : 178 pages
Book Rating : 4.0/5 (32 download)

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Book Synopsis Bioimage Data Analysis Workflows by : Kota Miura

Download or read book Bioimage Data Analysis Workflows written by Kota Miura and published by Springer Nature. This book was released on 2019-10-17 with total page 178 pages. Available in PDF, EPUB and Kindle. Book excerpt: This Open Access textbook provides students and researchers in the life sciences with essential practical information on how to quantitatively analyze data images. It refrains from focusing on theory, and instead uses practical examples and step-by step protocols to familiarize readers with the most commonly used image processing and analysis platforms such as ImageJ, MatLab and Python. Besides gaining knowhow on algorithm usage, readers will learn how to create an analysis pipeline by scripting language; these skills are important in order to document reproducible image analysis workflows. The textbook is chiefly intended for advanced undergraduates in the life sciences and biomedicine without a theoretical background in data analysis, as well as for postdocs, staff scientists and faculty members who need to perform regular quantitative analyses of microscopy images.

Scanning Electron Microscopy

Author : Ludwig Reimer
Publisher : Springer
ISBN 13 : 3540389679
Total Pages : 538 pages
Book Rating : 4.5/5 (43 download)

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Book Synopsis Scanning Electron Microscopy by : Ludwig Reimer

Download or read book Scanning Electron Microscopy written by Ludwig Reimer and published by Springer. This book was released on 2013-11-11 with total page 538 pages. Available in PDF, EPUB and Kindle. Book excerpt: Scanning Electron Microscopy provides a description of the physics of electron-probe formation and of electron-specimen interactions. The different imaging and analytical modes using secondary and backscattered electrons, electron-beam-induced currents, X-ray and Auger electrons, electron channelling effects, and cathodoluminescence are discussed to evaluate specific contrasts and to obtain quantitative information.

Fundamentals of Light Microscopy and Electronic Imaging

Author : Douglas B. Murphy
Publisher :
ISBN 13 :
Total Pages : 538 pages
Book Rating : 4.:/5 (21 download)

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Book Synopsis Fundamentals of Light Microscopy and Electronic Imaging by : Douglas B. Murphy

Download or read book Fundamentals of Light Microscopy and Electronic Imaging written by Douglas B. Murphy and published by . This book was released on 2013 with total page 538 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Scanning Electron Microscopy and X-Ray Microanalysis

Author : Joseph Goldstein
Publisher : Springer Science & Business Media
ISBN 13 : 1461332737
Total Pages : 679 pages
Book Rating : 4.4/5 (613 download)

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Book Synopsis Scanning Electron Microscopy and X-Ray Microanalysis by : Joseph Goldstein

Download or read book Scanning Electron Microscopy and X-Ray Microanalysis written by Joseph Goldstein and published by Springer Science & Business Media. This book was released on 2013-11-11 with total page 679 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book has evolved by processes of selection and expansion from its predecessor, Practical Scanning Electron Microscopy (PSEM), published by Plenum Press in 1975. The interaction of the authors with students at the Short Course on Scanning Electron Microscopy and X-Ray Microanalysis held annually at Lehigh University has helped greatly in developing this textbook. The material has been chosen to provide a student with a general introduction to the techniques of scanning electron microscopy and x-ray microanalysis suitable for application in such fields as biology, geology, solid state physics, and materials science. Following the format of PSEM, this book gives the student a basic knowledge of (1) the user-controlled functions of the electron optics of the scanning electron microscope and electron microprobe, (2) the characteristics of electron-beam-sample inter actions, (3) image formation and interpretation, (4) x-ray spectrometry, and (5) quantitative x-ray microanalysis. Each of these topics has been updated and in most cases expanded over the material presented in PSEM in order to give the reader sufficient coverage to understand these topics and apply the information in the laboratory. Throughout the text, we have attempted to emphasize practical aspects of the techniques, describing those instru ment parameters which the microscopist can and must manipulate to obtain optimum information from the specimen. Certain areas in particular have been expanded in response to their increasing importance in the SEM field. Thus energy-dispersive x-ray spectrometry, which has undergone a tremendous surge in growth, is treated in substantial detail.

Quantitative Imaging in Cell Biology

Author :
Publisher : Academic Press
ISBN 13 : 0124202012
Total Pages : 609 pages
Book Rating : 4.1/5 (242 download)

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Book Synopsis Quantitative Imaging in Cell Biology by :

Download or read book Quantitative Imaging in Cell Biology written by and published by Academic Press. This book was released on 2014-06-25 with total page 609 pages. Available in PDF, EPUB and Kindle. Book excerpt: This new volume, number 123, of Methods in Cell Biology looks at methods for quantitative imaging in cell biology. It covers both theoretical and practical aspects of using optical fluorescence microscopy and image analysis techniques for quantitative applications. The introductory chapters cover fundamental concepts and techniques important for obtaining accurate and precise quantitative data from imaging systems. These chapters address how choice of microscope, fluorophores, and digital detector impact the quality of quantitative data, and include step-by-step protocols for capturing and analyzing quantitative images. Common quantitative applications, including co-localization, ratiometric imaging, and counting molecules, are covered in detail. Practical chapters cover topics critical to getting the most out of your imaging system, from microscope maintenance to creating standardized samples for measuring resolution. Later chapters cover recent advances in quantitative imaging techniques, including super-resolution and light sheet microscopy. With cutting-edge material, this comprehensive collection is intended to guide researchers for years to come. Covers sections on model systems and functional studies, imaging-based approaches and emerging studies Chapters are written by experts in the field Cutting-edge material

Advanced Computing in Electron Microscopy

Author : Earl J. Kirkland
Publisher : Springer Nature
ISBN 13 : 3030332608
Total Pages : 357 pages
Book Rating : 4.0/5 (33 download)

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Book Synopsis Advanced Computing in Electron Microscopy by : Earl J. Kirkland

Download or read book Advanced Computing in Electron Microscopy written by Earl J. Kirkland and published by Springer Nature. This book was released on 2020-03-09 with total page 357 pages. Available in PDF, EPUB and Kindle. Book excerpt: This updated and revised edition of a classic work provides a summary of methods for numerical computation of high resolution conventional and scanning transmission electron microscope images. At the limits of resolution, image artifacts due to the instrument and the specimen interaction can complicate image interpretation. Image calculations can help the user to interpret and understand high resolution information in recorded electron micrographs. The book contains expanded sections on aberration correction, including a detailed discussion of higher order (multipole) aberrations and their effect on high resolution imaging, new imaging modes such as ABF (annular bright field), and the latest developments in parallel processing using GPUs (graphic processing units), as well as updated references. Beginning and experienced users at the advanced undergraduate or graduate level will find the book to be a unique and essential guide to the theory and methods of computation in electron microscopy.

Logarithmic Image Processing: Theory and Applications

Author :
Publisher : Academic Press
ISBN 13 : 0128052295
Total Pages : 320 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis Logarithmic Image Processing: Theory and Applications by :

Download or read book Logarithmic Image Processing: Theory and Applications written by and published by Academic Press. This book was released on 2016-07-26 with total page 320 pages. Available in PDF, EPUB and Kindle. Book excerpt: Logarithmic Image Processing: Theory and Applications, the latest volume in the series that merges two long-running serials, Advances in Electronics and Electron Physics and Advances in Optical and Electron Microscopy and features cutting-edge articles on recent developments in all areas of microscopy, digital image processing, and many related subjects in electron physics. Merges two long-running serials, Advances in Electronics and Electron Physics and Advances in Optical and Electron Microscopy into a single volume Contains the latest information on logarithmic image processing and its theory and applications Features cutting-edge articles on recent developments in all areas of microscopy, digital image processing, and many related subjects in electron physics

Electron Microscopy of Polymers

Author : Goerg H. Michler
Publisher : Springer Science & Business Media
ISBN 13 : 3540363521
Total Pages : 472 pages
Book Rating : 4.5/5 (43 download)

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Book Synopsis Electron Microscopy of Polymers by : Goerg H. Michler

Download or read book Electron Microscopy of Polymers written by Goerg H. Michler and published by Springer Science & Business Media. This book was released on 2008-07-05 with total page 472 pages. Available in PDF, EPUB and Kindle. Book excerpt: The study of polymers by electron microscopy (EM) needs special techniques, precautions and preparation methods, including ultramicrotomy. General characteristics of the different techniques of EM, including scanning force microscopy, are given in this hands-on book. The application of these techniques to the study of morphology and properties, particularly micromechanical properties, is described in detail. Examples from all classes of polymers are presented.