Read Books Online and Download eBooks, EPub, PDF, Mobi, Kindle, Text Full Free.
Mastering Perl For Bioinformatics
Download Mastering Perl For Bioinformatics full books in PDF, epub, and Kindle. Read online Mastering Perl For Bioinformatics ebook anywhere anytime directly on your device. Fast Download speed and no annoying ads. We cannot guarantee that every ebooks is available!
Book Synopsis Mastering Perl for Bioinformatics by : James Tisdall
Download or read book Mastering Perl for Bioinformatics written by James Tisdall and published by "O'Reilly Media, Inc.". This book was released on 2003-09-25 with total page 399 pages. Available in PDF, EPUB and Kindle. Book excerpt: Historically, programming hasn't been considered a critical skill for biologists. But now, with access to vast amounts of biological data contained in public databases, programming skills are increasingly in strong demand in biology research and development. Perl, with its highly developed capacities in string handling, text processing, networking, and rapid prototyping, has emerged as the programming language of choice for biological data analysis.Mastering Perl for Bioinformatics covers the core Perl language and many of its module extensions, presenting them in the context of biological data and problems of pressing interest to the biological community. This book, along with Beginning Perl for Bioinformatics, forms a basic course in Perl programming. This second volume finishes the basic Perl tutorial material (references, complex data structures, object-oriented programming, use of modules--all presented in a biological context) and presents some advanced topics of considerable interest in bioinformatics.The range of topics covered in Mastering Perl for Bioinformatics prepares the reader for enduring and emerging developments in critical areas of bioinformatics programming such as: Gene finding String alignment Methods of data storage and retrieval (SML and databases) Modeling of networks (graphs and Petri nets) Graphics (Tk) Parallelization Interfacing with other programming languages Statistics (PDL) Protein structure determination Biological models of computation (DNA Computers) Biologists and computer scientists who have conquered the basics of Perl and are ready to move even further in their mastery of this versatile language will appreciate the author's well-balanced approach to applying Perl's analytical abilities to the field of bioinformatics. Full of practical examples and real-world biological problem solving, this book is a must for any reader wanting to move beyond beginner level Perl in bioinformatics.
Book Synopsis Beginning Perl for Bioinformatics by : James Tisdall
Download or read book Beginning Perl for Bioinformatics written by James Tisdall and published by "O'Reilly Media, Inc.". This book was released on 2001-10-22 with total page 388 pages. Available in PDF, EPUB and Kindle. Book excerpt: With its highly developed capacity to detect patterns in data, Perl has become one of the most popular languages for biological data analysis. But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems.Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem or class of problems, starting with the simplest and increasing in complexity as the book progresses. Each chapter includes programming exercises and teaches bioinformatics by showing and modifying programs that deal with various kinds of practical biological problems. By the end of the book you'll have a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to take on more advanced bioinformatics programming. Some of the later chapters focus in greater detail on specific bioinformatics topics. This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers: Programming basics and working with DNA sequences and strings Debugging your code Simulating gene mutations using random number generators Regular expressions and finding motifs in data Arrays, hashes, and relational databases Regular expressions and restriction maps Using Perl to parse PDB records, annotations in GenBank, and BLAST output
Book Synopsis Beginning Perl for Bioinformatics by : James Tisdall
Download or read book Beginning Perl for Bioinformatics written by James Tisdall and published by "O'Reilly Media, Inc.". This book was released on 2001 with total page 384 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book shows biologists with little or no programming experience how to use Perl, the ideal language for biological data analysis. Each chapter focuses on solving a particular problem or class of problems, so you'll finish the book with the skills to tackle more advanced bioinformatics programming.
Book Synopsis Perl Programming for Biologists by : D. Curtis Jamison
Download or read book Perl Programming for Biologists written by D. Curtis Jamison and published by John Wiley & Sons. This book was released on 2003-07-14 with total page 206 pages. Available in PDF, EPUB and Kindle. Book excerpt: Working on the assumption that the reader has no formal training in programming, Perl Programming for Biologists demonstrates how Perl is used to solve biological problems. Each chapter opens with a set of learning objectives, provides numerous review questions and self-study exercises, and concludes with a bulleted summary of key points. The author incorporates numerous real-life examples throughout the text. Upon completing the book, readers are able to quickly perform such tasks as correcting recurring errors in spreadsheets, scanning a Fasta sequence for every occurrence of an EcoRI site, adapting other writers' scripts to one's own purposes, and most important, writing reusable and maintainable scripts that spare the rote repetition of code.
Book Synopsis Mastering Perl for Bioinformatics by : John Smith
Download or read book Mastering Perl for Bioinformatics written by John Smith and published by Independently Published. This book was released on 2024-04-27 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: "Mastering Perl for Bioinformatics" is an essential resource designed to equip researchers, professionals, and students with the Perl programming skills required to tackle the computational challenges of modern biology. Covering fundamental to advanced techniques, this book provides a detailed exploration of how Perl can be employed in the analysis of DNA and RNA, protein sequences, and genomic data, as well as in systems biology and bioinformatics algorithms. Through practical examples, tutorials, and case studies, readers will learn to handle vast biological datasets, develop their own bioinformatics tools, and perform complex analyses. Each chapter dives deep into different aspects of bioinformatics, from basic syntax to the integration of external tools and databases, ensuring that readers can progress from foundational techniques to sophisticated applications seamlessly. Whether you're starting out in computational biology or looking to enhance your data analysis skills, "Mastering Perl for Bioinformatics" offers the comprehensive and accessible guidance necessary to master the tools and methodologies of this crucial science. Gain the Perl expertise to advance your research and unlock new possibilities in biological discovery.
Download or read book Learning Perl written by Randal Schwartz and published by "O'Reilly Media, Inc.". This book was released on 2011-06-23 with total page 389 pages. Available in PDF, EPUB and Kindle. Book excerpt: The sixth edition of this bestselling Perl tutorial includes recent changes to the language. Years of classroom testing and experience helped shape the book's pace and scope, and this edition is packed with exercises that let readers practice the concepts while they follow the text.
Book Synopsis UNIX and Perl to the Rescue! by : Keith Bradnam
Download or read book UNIX and Perl to the Rescue! written by Keith Bradnam and published by Cambridge University Press. This book was released on 2012-07-19 with total page 429 pages. Available in PDF, EPUB and Kindle. Book excerpt: Your research has generated gigabytes of data and now you need to analyse it. You hate using spreadsheets but it is all you know, so what else can you do? This book will transform how you work with large and complex data sets, teaching you powerful programming tools for slicing and dicing data to suit your needs. Written in a fun and accessible style, this step-by-step guide will inspire and inform non-programmers about the essential aspects of Unix and Perl. It shows how, with just a little programming knowledge, you can write programs that could save you hours, or even days. No prior experience is required and new concepts are introduced using numerous code examples that you can try out for yourself. Going beyond the basics, the authors touch upon many broader topics that will help those new to programming, including debugging and how to write in a good programming style.
Book Synopsis Bioinformatics Biocomputing and Perl by : Michael Moorhouse
Download or read book Bioinformatics Biocomputing and Perl written by Michael Moorhouse and published by John Wiley & Sons. This book was released on 2005-09-27 with total page 506 pages. Available in PDF, EPUB and Kindle. Book excerpt: Bioinformatics, Biocomputing and Perl presents a modern introduction to bioinformatics computing skills and practice. Structuring its presentation around four main areas of study, this book covers the skills vital to the day-to-day activities of today’s bioinformatician. Each chapter contains a series of maxims designed to highlight key points and there are exercises to supplement and cement the introduced material. Working with Perl presents an extended tutorial introduction to programming through Perl, the premier programming technology of the bioinformatics community. Even though no previous programming experience is assumed, completing the tutorial equips the reader with the ability to produce powerful custom programs with ease. Working with Data applies the programming skills acquired to processing a variety of bioinformatics data. In addition to advice on working with important data stores such as the Protein DataBank, SWISS-PROT, EMBL and the GenBank, considerable discussion is devoted to using bioinformatics data to populate relational database systems. The popular MySQL database is used in all examples. Working with the Web presents a discussion of the Web-based technologies that allow the bioinformatics researcher to publish both data and applications on the Internet. Working with Applications shifts gear from creating custom programs to using them. The tools described include Clustal-W, EMBOSS, STRIDE, BLAST and Xmgrace. An introduction to the important Bioperl Project concludes this chapter and rounds off the book.
Book Synopsis Mastering Python for Bioinformatics by : Ken Youens-Clark
Download or read book Mastering Python for Bioinformatics written by Ken Youens-Clark and published by "O'Reilly Media, Inc.". This book was released on 2021-05-05 with total page 457 pages. Available in PDF, EPUB and Kindle. Book excerpt: Life scientists today urgently need training in bioinformatics skills. Too many bioinformatics programs are poorly written and barely maintained--usually by students and researchers who've never learned basic programming skills. This practical guide shows postdoc bioinformatics professionals and students how to exploit the best parts of Python to solve problems in biology while creating documented, tested, reproducible software. Ken Youens-Clark, author of Tiny Python Projects (Manning), demonstrates not only how to write effective Python code but also how to use tests to write and refactor scientific programs. You'll learn the latest Python features and toolsâ??including linters, formatters, type checkers, and testsâ??to create documented and tested programs. You'll also tackle 14 challenges in Rosalind, a problem-solving platform for learning bioinformatics and programming. Create command-line Python programs to document and validate parameters Write tests to verify refactor programs and confirm they're correct Address bioinformatics ideas using Python data structures and modules such as Biopython Create reproducible shortcuts and workflows using makefiles Parse essential bioinformatics file formats such as FASTA and FASTQ Find patterns of text using regular expressions Use higher-order functions in Python like filter(), map(), and reduce()
Book Synopsis Programming Perl in the .NET Environment by : Yevgeny Menaker
Download or read book Programming Perl in the .NET Environment written by Yevgeny Menaker and published by Prentice Hall Professional. This book was released on 2003 with total page 498 pages. Available in PDF, EPUB and Kindle. Book excerpt: A practical introduction to programming in Perl utilizing the rich capabilities of Perl and the services provided by .NET.
Download or read book BLAST written by Ian Korf and published by "O'Reilly Media, Inc.". This book was released on 2003-07-29 with total page 363 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the only book completely devoted to the popular BLAST (Basic Local Alignment Search Tool), and one that every biologist with an interest in sequence analysis should learn from.
Book Synopsis R Programming for Bioinformatics by : Robert Gentleman
Download or read book R Programming for Bioinformatics written by Robert Gentleman and published by CRC Press. This book was released on 2008-07-14 with total page 328 pages. Available in PDF, EPUB and Kindle. Book excerpt: Due to its data handling and modeling capabilities as well as its flexibility, R is becoming the most widely used software in bioinformatics. R Programming for Bioinformatics explores the programming skills needed to use this software tool for the solution of bioinformatics and computational biology problems.Drawing on the author's first-hand exper
Book Synopsis Computational Biology by : Röbbe Wünschiers
Download or read book Computational Biology written by Röbbe Wünschiers and published by Springer Science & Business Media. This book was released on 2012-12-06 with total page 291 pages. Available in PDF, EPUB and Kindle. Book excerpt: -Teaches the reader how to use Unix, which is the key to basic computing and allows the most flexibility for bioinformatics applications -Written specifically with the needs of molecular biologists in mind -Easy to follow, written for beginners with no computational knowledge -Includes examples from biological data analysis -Can be use either for self-teaching or in courses
Book Synopsis Developing Bioinformatics Computer Skills by : Cynthia Gibas
Download or read book Developing Bioinformatics Computer Skills written by Cynthia Gibas and published by "O'Reilly Media, Inc.". This book was released on 2001 with total page 452 pages. Available in PDF, EPUB and Kindle. Book excerpt: This practical, hands-on guide shows how to develop a structured approach to biological data and the tools needed to analyze it. It's aimed at scientists and students learning computational approaches to biological data, as well as experienced biology researchers starting to use computers to handle data.
Download or read book Mastering Perl written by brian d foy and published by "O'Reilly Media, Inc.". This book was released on 2014-01-09 with total page 397 pages. Available in PDF, EPUB and Kindle. Book excerpt: Take the next step toward Perl mastery with advanced concepts that make coding easier, maintenance simpler, and execution faster. Mastering Perl isn't a collection of clever tricks, but a way of thinking about Perl programming for solving debugging, configuration, and many other real-world problems you’ll encounter as a working programmer. The third in O’Reilly’s series of landmark Perl tutorials (after Learning Perl and Intermediate Perl), this fully upated edition pulls everything together and helps you bend Perl to your will. Explore advanced regular expressions features Avoid common problems when writing secure programs Profile and benchmark Perl programs to see where they need work Wrangle Perl code to make it more presentable and readable Understand how Perl keeps track of package variables Define subroutines on the fly Jury-rig modules to fix code without editing the original source Use bit operations and bit vectors to store large data efficiently Learn how to detect errors that Perl doesn’t report Dive into logging, data persistence, and the magic of tied variables
Download or read book Beginning Perl written by James Lee and published by Apress. This book was released on 2010-06-14 with total page 453 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is a book for those of us who believed that we didn’t need to learn Perl, and now we know it is more ubiquitous than ever. Perl is extremely flexible and powerful, and it isn’t afraid of Web 2.0 or the cloud. Originally touted as the duct tape of the Internet, Perl has since evolved into a multipurpose, multiplatform language present absolutely everywhere: heavy-duty web applications, the cloud, systems administration, natural language processing, and financial engineering. Beginning Perl, Third Edition provides valuable insight into Perl’s role regarding all of these tasks and more. Commencing with a comprehensive overview of language basics, you’ll learn all about important concepts such as Perl’s data types and control flow constructs. This material sets the stage for a discussion of more complex topics, such as writing custom functions, using regular expressions, and file input and output. Next, the book moves on to the advanced topics of object-oriented programming, modules, web programming, and database administration with Perl’s powerful database interface module, DBI. The examples and code provided offer you all of the information you need to start writing your own powerful scripts to solve the problems listed above, and many more. Whether you are a complete novice or an experienced programmer, Beginning Perl, Third Edition offers an ideal guide to learning Perl.
Download or read book Learning Perl/Tk written by Nancy Walsh and published by O'Reilly Media. This book was released on 1999 with total page 394 pages. Available in PDF, EPUB and Kindle. Book excerpt: This tutorial for Perl/Tk, the extension to Perl for creating graphical user interfaces, shows readers how to use Perl/Tk to build graphical, event-driven applications for both Windows and UNIX. Rife with illustrations, it teaches how to implement and configure each Perl/Tk graphical element.
