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Identification And Functional Analysis Of Differentially Expressed Genes In Plant Response To Abiotic Stresses
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Book Synopsis Identification and functional analysis of differentially expressed genes in plant response to abiotic stresses by : Xuke Lu
Download or read book Identification and functional analysis of differentially expressed genes in plant response to abiotic stresses written by Xuke Lu and published by Frontiers Media SA. This book was released on 2023-08-24 with total page 333 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Abiotic Stress Signaling in Plants: Functional Genomic Intervention by : Girdhar K. Pandey
Download or read book Abiotic Stress Signaling in Plants: Functional Genomic Intervention written by Girdhar K. Pandey and published by Frontiers Media SA. This book was released on 2016-08-08 with total page 638 pages. Available in PDF, EPUB and Kindle. Book excerpt: Abiotic stresses such as high temperature, low-temperature, drought and salinity limit crop productivity worldwide. Understanding plant responses to these stresses is essential for rational engineering of crop plants. In Arabidopsis, the signal transduction pathways for abiotic stresses, light, several phytohormones and pathogenesis have been elucidated. A significant portion of plant genomes (Arabidopsis and rice were mostly studied) encodes for proteins involves in signaling such as receptor, sensors, kinases, phosphatases, transcription factors and transporters/channels. Despite decades of physiological and molecular effort, knowledge pertaining to how plants sense and transduce low and high temperature, low-water availability (drought), water-submergence, microgravity and salinity signals is still a major question for plant biologist. One major constraint hampering our understanding of these signal transduction processes in plants has been the lack or slow pace of application of molecular genomic and genetics knowledge in the form of gene function. In the post-genomic era, one of the major challenges is investigation and understanding of multiple genes and gene families regulating a particular physiological and developmental aspect of plant life cycle. One of the important physiological processes is regulation of stress response, which leads to adaptation or adjustment in response to adverse stimuli. With the holistic understanding of the signaling pathways involving not only one gene family but multiple genes or gene families, plant biologist can lay a foundation for designing and generating future crops, which can withstand the higher degree of environmental stresses (especially abiotic stresses, which are the major cause of crop loss throughout the world) without losing crop yield and productivity. Therefore, in this e-Book, we intend to incorporate the contribution from leading plant biologists to elucidate several aspects of stress signaling by functional genomics approaches.
Book Synopsis Understanding the Molecular Mechanisms of Plant Responses to Abiotic Stress by : Sang Yeol Lee
Download or read book Understanding the Molecular Mechanisms of Plant Responses to Abiotic Stress written by Sang Yeol Lee and published by Frontiers Media SA. This book was released on 2020-02-20 with total page 336 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plant responses to environmental stress are governed by complex molecular and biochemical signal transduction processes, which act in coordination to determine tolerance or sensitivity at the whole plant level. Upon exposure to abiotic stress, plants express a sophisticated coordinated response to reprogram interconnected defense networks and metabolic pathways, by alterations in the transcription, translation, and post-translational modification of defense-related genes and proteins. Traditionally, physiological and phenotypic responses were the major ones to be collected in plant stress biology. However, modern studies include the identification of key genes that influence stress tolerance and plant growth under the imposing stress and the verification of gene functions using knock out mutants or overexpression lines. In addition, genomics has become a necessary tool for the understanding of plant stress responses at the whole genome levels. The identification of stress-tolerant plant resources and the investigation of the functional role of the genetic variants is also a valuable tool in this research field. Recently, the advent of CRISPR/Cas genome editing technology, enables these variations to be introduced in crops for improved stress tolerance traits. Through the understanding of the molecular mechanisms involved in plant signaling in response to abiotic stress and crop performance characters under stress conditions, we hope to open new ways for the breeding of superior crops.
Book Synopsis Environmental Adaptations and Stress Tolerance of Plants in the Era of Climate Change by : Parvaiz Ahmad
Download or read book Environmental Adaptations and Stress Tolerance of Plants in the Era of Climate Change written by Parvaiz Ahmad and published by Springer Science & Business Media. This book was released on 2011-12-02 with total page 523 pages. Available in PDF, EPUB and Kindle. Book excerpt: Climate change is a complex phenomenon with a wide range of impacts on the environment. Biotic and abiotic stress are a result of climate change. Abiotic stress is caused by primary and secondary stresses which are an impediment to plant productivity. Prolonged exposure to these stresses results in altered metabolism and damage to biomolecules. Plants evolve defense mechanisms to withstand these stresses, e.g. synthesis of osmolytes, osmoprotectants, and antioxidants. Stress responsive genes and gene products including expressed proteins are implicated in conferring tolerance to the plant. This volume will provide the reader with a wide spectrum of information, including vital references. It also provides information as to how phytoconstituents, hormones and plant associated microbes help the plants to tolerate the stress. This volume also highlights the use of plant resources for ameliorating soil contaminants such as heavy metals. Dr. Parvaiz is Assistant professor in Botany at A.S. College, Srinagar, Jammu and Kashmir, India. He has completed his post-graduation in Botany in 2000 from Jamia Hamdard New Delhi India. After his Ph.D from the Indian Institute of Technology (IIT) Delhi, India in 2007 he joined the International Centre for Genetic Engineering and Biotechnology, New Delhi. He has published more than 20 research papers in peer reviewed journals and 4 book chapters. He has also edited a volume which is in press with Studium Press Pvt. India Ltd., New Delhi, India. Dr. Parvaiz is actively engaged in studying the molecular and physio-biochemical responses of different plants (mulberry, pea, Indian mustard) under environmental stress. Prof. M.N.V. Prasad is a Professor in the Department of Plant Sciences at the University of Hyderabad, India. He received B.Sc. (1973) and M.Sc. (1975) degrees from Andhra University, India, and the Ph.D. degree (1979) in botany from the University of Lucknow, India. Prasad had published 216 articles in peer reviewed journals and 82 book chapters and conference proceedings in the broad area of environmental botany and heavy metal stress in plants. He is the author, co-author, editor, or co-editor for eight books. He is the recipient of Pitamber Pant national Environment Fellowship of 2007 awarded by the Ministry of Environment and Forests, Government of India.
Book Synopsis Transcription Factors for Abiotic Stress Tolerance in Plants by : Shabir Hussain Wani
Download or read book Transcription Factors for Abiotic Stress Tolerance in Plants written by Shabir Hussain Wani and published by Academic Press. This book was released on 2020-08-19 with total page 298 pages. Available in PDF, EPUB and Kindle. Book excerpt: Transcription Factors for Abiotic Stress Tolerance in Plants highlights advances in the understanding of the regulatory network that impacts plant health and production, providing important insights for improving plant resistance. Plant production worldwide is suffering serious losses due to widespread abiotic stresses increasing as a result of global climate change. Frequently more than one abiotic stress can occur at once, for example extreme temperature and osmotic stress, which increases the complexity of these environmental stresses. Modern genetic engineering technologies are one of the promising tools for development of plants with efficient yields and resilience to abiotic stresses. Hence deciphering the molecular mechanisms and identifying the abiotic stress associated genes that control plant response to abiotic stresses is a vital requirement in developing plants with increased abiotic stress resilience. Addressing the various complexities of transcriptional regulation, this book includes chapters on cross talk and central regulation, regulatory networks, the role of DOF, WRKY and NAC transcription factors, zinc finger proteins, CRISPR/CAS9-based genome editing, C-Repeat (CRT) binding factors (CBFs)/Dehydration responsive element binding factors (DREBs) and factors impacting salt, cold and phosphorous stress levels, as well as transcriptional modulation of genes involved in nanomaterial-plant interactions. Transcription Factors for Abiotic Stress Tolerance in Plants provides a useful reference by unravelling the transcriptional regulatory networks in plants. Researchers and advanced students will find this book a valuable reference for understanding this vital area. Discusses abiotic stress tolerance and adaptive mechanisms based on the findings generated by unlocking the transcriptional regulatory network in plants Presents various kinds of regulatory gene networks identified for drought, salinity, cold and heat stress in plants Highlights urgent climate change issues in plants and their mitigation using modern biotechnological tools including genome editing.
Book Synopsis Biotic and Abiotic Stress Tolerance in Plants by : Sharad Vats
Download or read book Biotic and Abiotic Stress Tolerance in Plants written by Sharad Vats and published by Springer. This book was released on 2018-06-11 with total page 398 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book highlights some of the most important biochemical, physiological and molecular aspects of plant stress, together with the latest updates. It is divided into 14 chapters, written by eminent experts from around the globe and highlighting the effects of plant stress (biotic and abiotic) on the photosynthetic apparatus, metabolites, programmed cell death, germination etc. In turn, the role of beneficial elements, glutathione-S-transferase, phosphite and nitric oxide in the adaptive response of plants under stress and as a stimulator of better plant performance is also discussed. A dedicated chapter addresses research advances in connection with Capsicum, a commercially important plant, and stress tolerance, from classical breeding to the recent use of large-scale transcriptome and genome sequencing technologies. The book also explores the significance of the liliputians of the plant kingdom (Bryophytes) as biomonitors/bioindicators, and general and specialized bioinformatics resources that can benefit anyone working in the field of plant stress biology. Given the information compiled here, the book will offer a valuable guide for students and researchers of plant molecular biology and stress physiology alike.
Book Synopsis Stress-Activated Protein Kinases by : Francesc Posas
Download or read book Stress-Activated Protein Kinases written by Francesc Posas and published by Springer Science & Business Media. This book was released on 2008-01-24 with total page 322 pages. Available in PDF, EPUB and Kindle. Book excerpt: In this book leading researchers in the field discuss the state-of-the-art of many aspects of SAPK signaling in various systems from yeast to mammals. These include various chapters on regulatory mechanisms as well as the contribution of the SAPK signaling pathways to processes such as gene expression, metabolism, cell cycle regulation, immune responses and tumorigenesis. Written by international experts, the book will appeal to cell biologists and biochemists.
Book Synopsis Plant Abiotic Stress by : Matthew A. Jenks
Download or read book Plant Abiotic Stress written by Matthew A. Jenks and published by John Wiley & Sons. This book was released on 2008-04-15 with total page 288 pages. Available in PDF, EPUB and Kindle. Book excerpt: Over the past decade, our understanding of plant adaptation to environmental stress has grown considerably. This book focuses on stress caused by the inanimate components of the environment associated with climatic, edaphic and physiographic factors that substantially limit plant growth and survival. Categorically these are abiotic stresses, which include drought, salinity, non-optimal temperatures and poor soil nutrition. Another stress, herbicides, is covered in this book to highlight how plants are impacted by abiotic stress originating from anthropogenic sources. The book also addresses the high degree to which plant responses to quite diverse forms of environmental stress are interconnected, describing the ways in which the plant utilizes and integrates many common signals and subsequent pathways to cope with less favorable conditions. The book is directed at researchers and professionals in plant physiology, cell biology and molecular biology, in both the academic and industrial sectors.
Book Synopsis Identification and Characterization of Cold-Tolerance Associated Genes in Wheat by : Muhammad Zayed
Download or read book Identification and Characterization of Cold-Tolerance Associated Genes in Wheat written by Muhammad Zayed and published by . This book was released on 2019 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt: The low temperature remains as one of the major limiting factors of crop productivity in the temperate region, and identification of cold tolerance related genes is crucial for developing cold tolerant crop plants to increase agricultural productivity. The objective of my thesis is to identify cold tolerance related candidate genes in wheat, one of the major crops in the temperate region. In Chapter 2, I have reviewed the literature pertaining to the mechanisms of cold tolerance in plants with specific emphasis on Wheat. In Chapter 3, forty candidate genes with increased expression under cold exposure based on published microarray data were selected and further characterized. These genes belonging to four categories namely defense-related regulators; transcriptional and epigenetic regulators; post-transcriptional and post-translational regulators; and genes of unknown functions revealed many differentially expressed genes including Remorin - upregulated in response to cold; a novel gene in wheat homologous to RD29B of Arabidopsis-upregulated in response to cold and ABA; and another novel gene regulated by both ABA and MetJA. In chapter 4, the results of genome-wide identification and characterization of the wheat remorin family and its association with cold tolerance are presented. A search of the wheat database revealed the existence of twenty different remorin genes that we classified into six groups sharing a common structure and phylogenetic origin. Promoter analysis of TaREM genes revealed the presence of putative cis-elements related to diverse functions like development, hormonal regulation, biotic and abiotic stress responsiveness. Expression levels of TaREM genes were measured in plants grown under in field and laboratory conditions and in response to hormone treatment. Our analyses revealed twelve members of the remorin family that are regulated during cold acclimation of wheat in four different tissues (root, crown, stem and leaves), with the highest expression in roots. Differential gene expression was found between wheat cultivars with contrasting degree of cold tolerance suggesting the implication of TaREM genes in cold response and tolerance. Additionally, eight genes were induced in response to ABA and MetJA treatment. This genome-wide analysis of TaREM genes provides valuable resources for functional analysis aimed at understanding their role in stress adaptation. The chapter 5 is focused on gaining insights into the evolutionary history and in-silico functional characterization of a novel cold-responsive gene in wheat. This gene in wheat has distant homology to known abiotic stress-related genes in other plants including CAP160 in Spinacia oleracea, RD29B in Arabidopsis and CDeT11-24 in Craterostigma plantagineum. The results show that these genes are homologous and may have evolved from a common ancestor. The Bayesian phylogenetic analyses of the protein sequences of this gene from various plant species revealed three distinctive clades. Further analyses revealed that this gene has predominantly evolved through neutral processes with some regions experiencing signatures of negative selections and some regions showing signatures of episodic positive selections. These genes contained common K-like segments and function predictions revealed that these protein-coding genes may share at least two functions related to abiotic stress conditions. One function is similar to the cryoprotective function of LEA protein, and the second function as a signalling molecule by binding specifically to phosphatidic acid.
Book Synopsis Salinity: Environment — Plants — Molecules by : André Läuchli
Download or read book Salinity: Environment — Plants — Molecules written by André Läuchli and published by Springer Science & Business Media. This book was released on 2007-05-08 with total page 551 pages. Available in PDF, EPUB and Kindle. Book excerpt: In biology, the very big global and thevery small molecular issues currently appear to be in the limelight ofpublic interest and research funding policies. They are in danger of drifting apart from each other. They apply very coarse and very fine scaling, respectively, but coherence is lost when the various intermediate levels of different scales are neglected. Regarding SALINITY we are clearly dealing with a global problem, which due to progressing salinization of arable land is of vital interest for society. Explanations and basic understanding as well as solutions and remedies may finally lie at the molecular level. It is a general approach in science to look for understanding of any system under study at the next finer (or "lower") level of scaling. This in itself shows that we need a whole ladder of levels with increasingly finer steps from the global impact to the molecular bases of SALINITY relations. It is in this vein that the 22 chapters of this book aim at providing an integrated view of SALINITY.
Book Synopsis Plant Stress Physiology, 2nd Edition by : Sergey Shabala
Download or read book Plant Stress Physiology, 2nd Edition written by Sergey Shabala and published by CABI. This book was released on 2017-01-20 with total page 378 pages. Available in PDF, EPUB and Kindle. Book excerpt: Completely updated from the successful first edition, this book provides a timely update on the recent progress in our knowledge of all aspects of plant perception, signalling and adaptation to a variety of environmental stresses. It covers in detail areas such as drought, salinity, waterlogging, oxidative stress, pathogens, and extremes of temperature and pH. This second edition presents detailed and up-to-date research on plant responses to a wide range of stresses Includes new full-colour figures to help illustrate the principles outlined in the text Is written in a clear and accessible format, with descriptive abstracts for each chapter. Written by an international team of experts, this book provides researchers with a better understanding of the major physiological and molecular mechanisms facilitating plant tolerance to adverse environmental factors. This new edition of Plant Stress Physiology is an essential resource for researchers and students of ecology, plant biology, agriculture, agronomy and plant breeding.
Book Synopsis Water Stress and Crop Plants by : Parvaiz Ahmad
Download or read book Water Stress and Crop Plants written by Parvaiz Ahmad and published by John Wiley & Sons. This book was released on 2016-06-08 with total page 784 pages. Available in PDF, EPUB and Kindle. Book excerpt: Plants are subjected to a variety of abiotic stresses such as drought, temperature, salinity, air pollution, heavy metals, UV radiations, etc. To survive under these harsh conditions plants are equipped with different resistance mechanisms which vary from species to species. Due to the environmental fluctuations agricultural and horticultural crops are often exposed to different environmental stresses leading to decreased yield and problems in the growth and development of the crops. Drought stress has been found to decrease the yield to an alarming rate of some important crops throughout the globe. During last few decades, lots of physiological and molecular works have been conducted under water stress in crop plants. Water Stress and Crop Plants: A Sustainable Approach presents an up-to-date in-depth coverage of drought and flooding stress in plants, including the types, causes and consequences on plant growth and development. It discusses the physiobiochemical, molecular and omic approaches, and responses of crop plants towards water stress. Topics include nutritional stress, oxidative stress, hormonal regulation, transgenic approaches, mitigation of water stress, approaches to sustainability, and modern tools and techniques to alleviate the water stress on crop yields. This practical book offers pragmatic guidance for scientists and researchers in plant biology, and agribusinesses and biotechnology companies dealing with agronomy and environment, to mitigate the negative effects of stress and improve yield under stress. The broad coverage also makes this a valuable guide enabling students to understand the physiological, biochemical, and molecular mechanisms of environmental stress in plants.
Book Synopsis Biotechnologies of Crop Improvement, Volume 2 by : Satbir Singh Gosal
Download or read book Biotechnologies of Crop Improvement, Volume 2 written by Satbir Singh Gosal and published by Springer. This book was released on 2018-07-09 with total page 498 pages. Available in PDF, EPUB and Kindle. Book excerpt: During the past 15 years, cellular and molecular approaches have emerged as valuable adjuncts to supplement and complement conventional breeding methods for a wide variety of crop plants. Biotechnology increasingly plays a role in the creation, conservation, characterization and utilization of genetic variability for germplasm enhancement. For instance, anther/microspore culture, somaclonal variation, embryo culture and somatic hybridization are being exploited for obtaining incremental improvement in the existing cultivars. In addition, genes that confer insect- and disease-resistance, abiotic stress tolerance, herbicide tolerance and quality traits have been isolated and re-introduced into otherwise sensitive or susceptible species by a variety of transgenic techniques. Together these transformative methodologies grant access to a greater repertoire of genetic diversity as the gene(s) may come from viruses, bacteria, fungi, insects, animals, human beings, unrelated plants or even be artificially derived. Remarkable achievements have been made in the production, characterization, field evaluation and commercialization of transgenic crop varieties worldwide. Likewise, significant advances have been made towards increasing crop yields, improving nutritional quality, enabling crops to be raised under adverse conditions and developing resistance to pests and diseases for sustaining global food and nutritional security. The overarching purpose of this 3-volume work is to summarize the history of crop improvement from a technological perspective but to do so with a forward outlook on further advancement and adaptability to a changing world. Our carefully chosen “case studies of important plant crops” intend to serve a diverse spectrum of audience looking for the right tools to tackle complicated local and global issues.
Book Synopsis Plant MicroRNAs by : Stefan de Folter
Download or read book Plant MicroRNAs written by Stefan de Folter and published by Humana Press. This book was released on 2019-01-31 with total page 363 pages. Available in PDF, EPUB and Kindle. Book excerpt: This detailed volume provides a collection of protocols for the study of miRNA functions in plants. Beginning with coverage of miRNA function, biogenesis, activity, and evolution in plants, the book continues by guiding readers through methods on the identification and detection of plant miRNAs, bioinformatic analyses, and strategies for functional analyses of miRNAs. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Plant MicroRNAs: Method and Protocols aims to ensure successful results in the further study of this vital area of plant science.
Book Synopsis Abiotic Stress in Plants by : Arun Shanker
Download or read book Abiotic Stress in Plants written by Arun Shanker and published by BoD – Books on Demand. This book was released on 2011-09-22 with total page 444 pages. Available in PDF, EPUB and Kindle. Book excerpt: World population is growing at an alarming rate and is anticipated to reach about six billion by the end of year 2050. On the other hand, agricultural productivity is not increasing at a required rate to keep up with the food demand. The reasons for this are water shortages, depleting soil fertility and mainly various abiotic stresses. The fast pace at which developments and novel findings that are recently taking place in the cutting edge areas of molecular biology and basic genetics, have reinforced and augmented the efficiency of science outputs in dealing with plant abiotic stresses. In depth understanding of the stresses and their effects on plants is of paramount importance to evolve effective strategies to counter them. This book is broadly dived into sections on the stresses, their mechanisms and tolerance, genetics and adaptation, and focuses on the mechanic aspects in addition to touching some adaptation features. The chief objective of the book hence is to deliver state of the art information for comprehending the nature of abiotic stress in plants. We attempted here to present a judicious mixture of outlooks in order to interest workers in all areas of plant sciences.
Book Synopsis Functional analysis of species-specific noncoding RNAs in plants by : Yuepeng Song
Download or read book Functional analysis of species-specific noncoding RNAs in plants written by Yuepeng Song and published by Frontiers Media SA. This book was released on 2023-02-01 with total page 201 pages. Available in PDF, EPUB and Kindle. Book excerpt:
Book Synopsis Identification and Functional Dissection of Stress-responsive Genes in Cotton by : Jia-He Wu
Download or read book Identification and Functional Dissection of Stress-responsive Genes in Cotton written by Jia-He Wu and published by Frontiers Media SA. This book was released on 2022-11-22 with total page 415 pages. Available in PDF, EPUB and Kindle. Book excerpt:
