Handbook Of Functional Mri Data Analysis

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Handbook of Functional MRI Data Analysis

Author : Russell A. Poldrack
Publisher : Cambridge University Press
ISBN 13 : 9781009481168
Total Pages : 0 pages
Book Rating : 4.4/5 (811 download)

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Book Synopsis Handbook of Functional MRI Data Analysis by : Russell A. Poldrack

Download or read book Handbook of Functional MRI Data Analysis written by Russell A. Poldrack and published by Cambridge University Press. This book was released on 2024-02-08 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging brain function. Handbook for Functional MRI Data Analysis provides a comprehensive and practical introduction to the methods used for fMRI data analysis. Using minimal jargon, this book explains the concepts behind processing fMRI data, focusing on the techniques that are most commonly used in the field. This book provides background about the methods employed by common data analysis packages including FSL, SPM, and AFNI. Some of the newest cutting-edge techniques, including pattern classification analysis, connectivity modeling, and resting state network analysis, are also discussed. Readers of this book, whether newcomers to the field or experienced researchers, will obtain a deep and effective knowledge of how to employ fMRI analysis to ask scientific questions and become more sophisticated users of fMRI analysis software.

Handbook of Functional MRI Data Analysis

Author : Russell A. Poldrack
Publisher : Cambridge University Press
ISBN 13 : 9780521517669
Total Pages : 238 pages
Book Rating : 4.5/5 (176 download)

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Book Synopsis Handbook of Functional MRI Data Analysis by : Russell A. Poldrack

Download or read book Handbook of Functional MRI Data Analysis written by Russell A. Poldrack and published by Cambridge University Press. This book was released on 2011-08-22 with total page 238 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging brain function. Handbook for Functional MRI Data Analysis provides a comprehensive and practical introduction to the methods used for fMRI data analysis. Using minimal jargon, this book explains the concepts behind processing fMRI data, focusing on the techniques that are most commonly used in the field. This book provides background about the methods employed by common data analysis packages including FSL, SPM, and AFNI. Some of the newest cutting-edge techniques, including pattern classification analysis, connectivity modeling, and resting state network analysis, are also discussed. Readers of this book, whether newcomers to the field or experienced researchers, will obtain a deep and effective knowledge of how to employ fMRI analysis to ask scientific questions and become more sophisticated users of fMRI analysis software.

Handbook of Functional MRI Data Analysis

Author : Russell A. Poldrack
Publisher : Cambridge University Press
ISBN 13 : 1139498363
Total Pages : 239 pages
Book Rating : 4.1/5 (394 download)

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Book Synopsis Handbook of Functional MRI Data Analysis by : Russell A. Poldrack

Download or read book Handbook of Functional MRI Data Analysis written by Russell A. Poldrack and published by Cambridge University Press. This book was released on 2011-08-22 with total page 239 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional magnetic resonance imaging (fMRI) has become the most popular method for imaging brain function. Handbook of Functional MRI Data Analysis provides a comprehensive and practical introduction to the methods used for fMRI data analysis. Using minimal jargon, this book explains the concepts behind processing fMRI data, focusing on the techniques that are most commonly used in the field. This book provides background about the methods employed by common data analysis packages including FSL, SPM and AFNI. Some of the newest cutting-edge techniques, including pattern classification analysis, connectivity modeling and resting state network analysis, are also discussed. Readers of this book, whether newcomers to the field or experienced researchers, will obtain a deep and effective knowledge of how to employ fMRI analysis to ask scientific questions and become more sophisticated users of fMRI analysis software.

Handbook of functional connectivity Magnetic Resonance Imaging methods in CONN

Author : Alfonso Nieto-Castanon
Publisher : Hilbert Press
ISBN 13 : 0578644002
Total Pages : 108 pages
Book Rating : 4.5/5 (786 download)

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Book Synopsis Handbook of functional connectivity Magnetic Resonance Imaging methods in CONN by : Alfonso Nieto-Castanon

Download or read book Handbook of functional connectivity Magnetic Resonance Imaging methods in CONN written by Alfonso Nieto-Castanon and published by Hilbert Press. This book was released on 2020-01-31 with total page 108 pages. Available in PDF, EPUB and Kindle. Book excerpt: This handbook describes methods for processing and analyzing functional connectivity Magnetic Resonance Imaging (fcMRI) data using the CONN toolbox, a popular freely-available functional connectivity analysis software. Content description [excerpt from introduction] The first section (fMRI minimal preprocessing pipeline) describes standard and advanced preprocessing steps in fcMRI. These steps are aimed at correcting or minimizing the influence of well-known factors affecting the quality of functional and anatomical MRI data, including effects arising from subject motion within the scanner, temporal and spatial image distortions due to the sequential nature of the scanning acquisition protocol, and inhomogeneities in the scanner magnetic field, as well as anatomical differences among subjects. Even after these conventional preprocessing steps, the measured blood-oxygen-level-dependent (BOLD) signal often still contains a considerable amount of noise from a combination of physiological effects, outliers, and residual subject-motion factors. If unaccounted for, these factors would introduce very strong and noticeable biases in all functional connectivity measures. The second section (fMRI denoising pipeline) describes standard and advanced denoising procedures in CONN that are used to characterize and remove the effect of these residual non-neural noise sources. Functional connectivity Magnetic Resonance Imaging studies attempt to quantify the level of functional integration across different brain areas. The third section (functional connectivity measures) describes a representative set of functional connectivity measures available in CONN, each focusing on different indicators of functional integration, including seed-based connectivity measures, ROI-to-ROI measures, graph theoretical approaches, network-based measures, and dynamic connectivity measures. Second-level analyses allow researchers to make inferences about properties of groups or populations, by generalizing from the observations of only a subset of subjects in a study. The fourth section (General Linear Model) describes the mathematics behind the General Linear Model (GLM), the approach used in CONN for all second-level analyses of functional connectivity measures. The description includes GLM model definition, parameter estimation, and hypothesis testing framework, as well as several practical examples and general guidelines aimed at helping researchers use this method to answer their specific research questions. The last section (cluster-level inferences) details several approaches implemented in CONN that allow researchers to make meaningful inferences from their second-level analysis results while providing appropriate family-wise error control (FWEC), whether in the context of voxel-based measures, such as when studying properties of seed-based maps across multiple subjects, or in the context of ROI-to-ROI measures, such as when studying properties of ROI-to-ROI connectivity matrices across multiple subjects.

Handbook of Neuroimaging Data Analysis

Author : Hernando Ombao
Publisher : CRC Press
ISBN 13 : 1482220989
Total Pages : 702 pages
Book Rating : 4.4/5 (822 download)

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Book Synopsis Handbook of Neuroimaging Data Analysis by : Hernando Ombao

Download or read book Handbook of Neuroimaging Data Analysis written by Hernando Ombao and published by CRC Press. This book was released on 2016-11-18 with total page 702 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book explores various state-of-the-art aspects behind the statistical analysis of neuroimaging data. It examines the development of novel statistical approaches to model brain data. Designed for researchers in statistics, biostatistics, computer science, cognitive science, computer engineering, biomedical engineering, applied mathematics, physics, and radiology, the book can also be used as a textbook for graduate-level courses in statistics and biostatistics or as a self-study reference for Ph.D. students in statistics, biostatistics, psychology, neuroscience, and computer science.

The Statistical Analysis of Functional MRI Data

Author : Nicole Lazar
Publisher : Springer Science & Business Media
ISBN 13 : 0387781919
Total Pages : 302 pages
Book Rating : 4.3/5 (877 download)

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Book Synopsis The Statistical Analysis of Functional MRI Data by : Nicole Lazar

Download or read book The Statistical Analysis of Functional MRI Data written by Nicole Lazar and published by Springer Science & Business Media. This book was released on 2008-06-10 with total page 302 pages. Available in PDF, EPUB and Kindle. Book excerpt: The study of brain function is one of the most fascinating pursuits of m- ern science. Functional neuroimaging is an important component of much of the current research in cognitive, clinical, and social psychology. The exci- ment of studying the brain is recognized in both the popular press and the scienti?c community. In the pages of mainstream publications, including The New York Times and Wired, readers can learn about cutting-edge research into topics such as understanding how customers react to products and - vertisements (“If your brain has a ‘buy button,’ what pushes it?”, The New York Times,October19,2004),howviewersrespondtocampaignads(“Using M. R. I. ’s to see politics on the brain,” The New York Times, April 20, 2004; “This is your brain on Hillary: Political neuroscience hits new low,” Wired, November 12,2007),howmen and womenreactto sexualstimulation (“Brain scans arouse researchers,”Wired, April 19, 2004), distinguishing lies from the truth (“Duped,” The New Yorker, July 2, 2007; “Woman convicted of child abuse hopes fMRI can prove her innocence,” Wired, November 5, 2007), and even what separates “cool” people from “nerds” (“If you secretly like Michael Bolton, we’ll know,” Wired, October 2004). Reports on pathologies such as autism, in which neuroimaging plays a large role, are also common (for - stance, a Time magazine cover story from May 6, 2002, entitled “Inside the world of autism”).

Introduction to Neuroimaging Analysis

Author : Mark Jenkinson
Publisher : Oxford University Press
ISBN 13 : 0198816308
Total Pages : 277 pages
Book Rating : 4.1/5 (988 download)

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Book Synopsis Introduction to Neuroimaging Analysis by : Mark Jenkinson

Download or read book Introduction to Neuroimaging Analysis written by Mark Jenkinson and published by Oxford University Press. This book was released on 2018 with total page 277 pages. Available in PDF, EPUB and Kindle. Book excerpt: This accessible primer gives an introduction to the wide array of MRI-based neuroimaging methods that are used in research. It provides an overview of the fundamentals of what different MRI modalities measure, what artifacts commonly occur, the essentials of the analysis, and common 'pipelines'.

Functional Magnetic Resonance Imaging

Author : Scott A. Huettel
Publisher :
ISBN 13 : 9780878932887
Total Pages : 492 pages
Book Rating : 4.9/5 (328 download)

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Book Synopsis Functional Magnetic Resonance Imaging by : Scott A. Huettel

Download or read book Functional Magnetic Resonance Imaging written by Scott A. Huettel and published by . This book was released on 2004 with total page 492 pages. Available in PDF, EPUB and Kindle. Book excerpt:

The New Mind Readers

Author : Russell A. Poldrack
Publisher : Princeton University Press
ISBN 13 : 0691208980
Total Pages : 216 pages
Book Rating : 4.6/5 (912 download)

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Book Synopsis The New Mind Readers by : Russell A. Poldrack

Download or read book The New Mind Readers written by Russell A. Poldrack and published by Princeton University Press. This book was released on 2020-10-06 with total page 216 pages. Available in PDF, EPUB and Kindle. Book excerpt: Thinking on 20 watts -- The visible mind -- fMRI grows up -- Can fMRI read minds? -- How do brains change over time? -- Crimes and lies -- Decision neuroscience -- Is mental illness just a brain disease? -- The future of neuroimaging.

Statistical Parametric Mapping: The Analysis of Functional Brain Images

Author : William D. Penny
Publisher : Elsevier
ISBN 13 : 0080466508
Total Pages : 689 pages
Book Rating : 4.0/5 (84 download)

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Book Synopsis Statistical Parametric Mapping: The Analysis of Functional Brain Images by : William D. Penny

Download or read book Statistical Parametric Mapping: The Analysis of Functional Brain Images written by William D. Penny and published by Elsevier. This book was released on 2011-04-28 with total page 689 pages. Available in PDF, EPUB and Kindle. Book excerpt: In an age where the amount of data collected from brain imaging is increasing constantly, it is of critical importance to analyse those data within an accepted framework to ensure proper integration and comparison of the information collected. This book describes the ideas and procedures that underlie the analysis of signals produced by the brain. The aim is to understand how the brain works, in terms of its functional architecture and dynamics. This book provides the background and methodology for the analysis of all types of brain imaging data, from functional magnetic resonance imaging to magnetoencephalography. Critically, Statistical Parametric Mapping provides a widely accepted conceptual framework which allows treatment of all these different modalities. This rests on an understanding of the brain's functional anatomy and the way that measured signals are caused experimentally. The book takes the reader from the basic concepts underlying the analysis of neuroimaging data to cutting edge approaches that would be difficult to find in any other source. Critically, the material is presented in an incremental way so that the reader can understand the precedents for each new development. This book will be particularly useful to neuroscientists engaged in any form of brain mapping; who have to contend with the real-world problems of data analysis and understanding the techniques they are using. It is primarily a scientific treatment and a didactic introduction to the analysis of brain imaging data. It can be used as both a textbook for students and scientists starting to use the techniques, as well as a reference for practicing neuroscientists. The book also serves as a companion to the software packages that have been developed for brain imaging data analysis. An essential reference and companion for users of the SPM software Provides a complete description of the concepts and procedures entailed by the analysis of brain images Offers full didactic treatment of the basic mathematics behind the analysis of brain imaging data Stands as a compendium of all the advances in neuroimaging data analysis over the past decade Adopts an easy to understand and incremental approach that takes the reader from basic statistics to state of the art approaches such as Variational Bayes Structured treatment of data analysis issues that links different modalities and models Includes a series of appendices and tutorial-style chapters that makes even the most sophisticated approaches accessible

Functional MRI

Author : Ramachandran Ramani
Publisher : Oxford University Press
ISBN 13 : 019029776X
Total Pages : 265 pages
Book Rating : 4.1/5 (92 download)

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Book Synopsis Functional MRI by : Ramachandran Ramani

Download or read book Functional MRI written by Ramachandran Ramani and published by Oxford University Press. This book was released on 2019-01-23 with total page 265 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional MRI: Basic Principles and Emerging Clinical Applications provides an overview of the basic principles of fMRI for clinicians with minimal knowledge of the imaging technique and its research potential and clinical applications. The text is divided into two parts, with Section I covering the primary signal measured in fMRI (BOLD), the correlation between neuronal activity and the BOLD signal, and how the data is analyzed and interpreted in fMRI. Section II explores applications of fMRI in cognitive neuroscience and common psychiatric disorders, surgical planning in neurosurgery, anesthesia and the intensive care unit, and more. Timely and highly accessible, this book is a valuable resource for researchers and clinicians interested in understanding what fMRI is, how it works, and its applications.

fMRI

Author : Peter A. Bandettini
Publisher : MIT Press
ISBN 13 : 0262538032
Total Pages : 282 pages
Book Rating : 4.2/5 (625 download)

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Book Synopsis fMRI by : Peter A. Bandettini

Download or read book fMRI written by Peter A. Bandettini and published by MIT Press. This book was released on 2020-02-25 with total page 282 pages. Available in PDF, EPUB and Kindle. Book excerpt: An accessible introduction to the history, fundamental concepts, challenges, and controversies of the fMRI by one of the pioneers in the field. The discovery of functional MRI (fMRI) methodology in 1991 was a breakthrough in neuroscience research. This non-invasive, relatively high-speed, and high sensitivity method of mapping human brain activity enabled observation of subtle localized changes in blood flow associated with brain activity. Thousands of scientists around the world have not only embraced fMRI as a new and powerful method that complemented their ongoing studies but have also gone on to redirect their research around this revolutionary technique. This volume in the MIT Press Essential Knowledge series offers an accessible introduction to the history, fundamental concepts, challenges, and controversies of fMRI, written by one of the pioneers in the field. Peter Bandettini covers the essentials of fMRI, providing insight and perspective from his nearly three decades of research. He describes other brain imaging and assessment methods; the sources of fMRI contrasts; the basic methodology, from hardware to pulse sequences; brain activation experiment design strategies; and data and image processing. A unique, standalone chapter addresses major controversies in the field, outlining twenty-six challenges that have helped shape fMRI research. Finally, Bandettini lays out the four essential pillars of fMRI: technology, methodology, interpretation, and applications. The book can serve as a guide for the curious nonexpert and a reference for both veteran and novice fMRI scientists.

Introduction to Resting State fMRI Functional Connectivity

Author : Janine Bijsterbosch
Publisher : Oxford University Press
ISBN 13 : 0192535757
Total Pages : 287 pages
Book Rating : 4.1/5 (925 download)

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Book Synopsis Introduction to Resting State fMRI Functional Connectivity by : Janine Bijsterbosch

Download or read book Introduction to Resting State fMRI Functional Connectivity written by Janine Bijsterbosch and published by Oxford University Press. This book was released on 2017-06-15 with total page 287 pages. Available in PDF, EPUB and Kindle. Book excerpt: Spontaneous 'resting-state' fluctuations in neuronal activity offer insights into the inherent organisation of the human brain, and may provide markers for diagnosis and treatment of mental disorders. Resting state functional magnetic resonance imaging (fMRI) can be used to investigate intrinsic functional connectivity networks, which are identified based on similarities in the signal measured from different regions. From data acquisition to results interpretation, An Introduction to Resting State fMRI Functional Connectivity discusses a wide range of approaches without expecting previous knowledge of the reader, making it truly accessible to readers from a broad range of backgrounds. Supplemented with online examples to enable the reader to obtain hands-on experience working with data, the text also provides details to enhance learning for those already experienced in the field. The Oxford Neuroimaging Primers are written for new researchers or advanced undergraduates in neuroimaging to provide a thorough understanding of the ways in which neuroimaging data can be analysed and interpreted. Aimed at students without a background in mathematics or physics, this book is also important reading for those familiar with task fMRI but new to the field of resting state fMRI.

Introduction to Functional Magnetic Resonance Imaging

Author : Richard B. Buxton
Publisher : Cambridge University Press
ISBN 13 : 1139481304
Total Pages : 479 pages
Book Rating : 4.1/5 (394 download)

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Book Synopsis Introduction to Functional Magnetic Resonance Imaging by : Richard B. Buxton

Download or read book Introduction to Functional Magnetic Resonance Imaging written by Richard B. Buxton and published by Cambridge University Press. This book was released on 2009-08-27 with total page 479 pages. Available in PDF, EPUB and Kindle. Book excerpt: Functional Magnetic Resonance Imaging (fMRI) has become a standard tool for mapping the working brain's activation patterns, both in health and in disease. It is an interdisciplinary field and crosses the borders of neuroscience, psychology, psychiatry, radiology, mathematics, physics and engineering. Developments in techniques, procedures and our understanding of this field are expanding rapidly. In this second edition of Introduction to Functional Magnetic Resonance Imaging, Richard Buxton – a leading authority on fMRI – provides an invaluable guide to how fMRI works, from introducing the basic ideas and principles to the underlying physics and physiology. He covers the relationship between fMRI and other imaging techniques and includes a guide to the statistical analysis of fMRI data. This book will be useful both to the experienced radiographer, and the clinician or researcher with no previous knowledge of the technology.

Handbook of Pediatric Brain Imaging

Author : Hao Huang
Publisher : Academic Press
ISBN 13 : 0128166428
Total Pages : 582 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Handbook of Pediatric Brain Imaging by : Hao Huang

Download or read book Handbook of Pediatric Brain Imaging written by Hao Huang and published by Academic Press. This book was released on 2021-10-27 with total page 582 pages. Available in PDF, EPUB and Kindle. Book excerpt: Handbook of Pediatric Brain Imaging: Methods and Applications presents state-of-the-art research on pediatric brain image acquisition and analysis from a broad range of imaging modalities, including MRI, EEG and MEG. With rapidly developing methods and applications of MRI, this book strongly emphasizes pediatric brain MRI, elaborating on the sub-categories of structure MRI, diffusion MRI, functional MRI, perfusion MRI and other MRI methods. It integrates a pediatric brain imaging perspective into imaging acquisition and analysis methods, covering head motion, small brain sizes, small cerebral blood flow of neonates, dynamic cortical gyrification, white matter tract growth, and much more. Presents state-of-the-art pediatric brain imaging methods and applications Shows how to optimize the pediatric neuroimaging acquisition and analysis protocols Illustrates how to obtain quantitative structural, functional and physiological measurements

Diffusion MRI

Author : Heidi Johansen-Berg
Publisher : Academic Press
ISBN 13 : 0124055095
Total Pages : 627 pages
Book Rating : 4.1/5 (24 download)

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Book Synopsis Diffusion MRI by : Heidi Johansen-Berg

Download or read book Diffusion MRI written by Heidi Johansen-Berg and published by Academic Press. This book was released on 2013-11-04 with total page 627 pages. Available in PDF, EPUB and Kindle. Book excerpt: Diffusion MRI remains the most comprehensive reference for understanding this rapidly evolving and powerful technology and is an essential handbook for designing, analyzing, and interpreting diffusion MR experiments. Diffusion imaging provides a unique window on human brain anatomy. This non-invasive technique continues to grow in popularity as a way to study brain pathways that could never before be investigated in vivo. This book covers the fundamental theory of diffusion imaging, discusses its most promising applications to basic and clinical neuroscience, and introduces cutting-edge methodological developments that will shape the field in coming years. Written by leading experts in the field, it places the exciting new results emerging from diffusion imaging in the context of classical anatomical techniques to show where diffusion studies might offer unique insights and where potential limitations lie. Fully revised and updated edition of the first comprehensive reference on a powerful technique in brain imaging Covers all aspects of a diffusion MRI study from acquisition through analysis to interpretation, and from fundamental theory to cutting-edge developments New chapters covering connectomics, advanced diffusion acquisition, artifact removal, and applications to the neonatal brain Provides practical advice on running an experiment Includes discussion of applications in psychiatry, neurology, neurosurgery, and basic neuroscience Full color throughout

MRI Atlas of Human White Matter

Author : Kenichi Oishi
Publisher : Academic Press
ISBN 13 : 0123820820
Total Pages : 266 pages
Book Rating : 4.1/5 (238 download)

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Book Synopsis MRI Atlas of Human White Matter by : Kenichi Oishi

Download or read book MRI Atlas of Human White Matter written by Kenichi Oishi and published by Academic Press. This book was released on 2010-11-12 with total page 266 pages. Available in PDF, EPUB and Kindle. Book excerpt: MRI Atlas of Human White Matter presents an atlas to the human brain on the basis of T 1-weighted imaging and diffusion tensor imaging. A general background on magnetic resonance imaging is provided, as well as the basics of diffusion tensor imaging. An overview of the principles and limitations in using this methodology in fiber tracking is included. This book describes the core white-matter structures, as well as the superficial white matter, the deep gray matter, and the cortex. It also presents a three-dimensional reconstruction and atlas of the brain white-matter tracts. The Montreal Neurological Institute coordinates, which are the most widely used, are adopted in this book as the primary coordinate system. The Talairach coordinate system is used as the secondary coordinate system. Based on magnetic resonance imaging and diffusion tensor imaging, the book offers a full segmentation of 220 white-matter and gray-matter structures with boundaries. Visualization of brain white matter anatomy via 3D diffusion tensor imaging (DTI) contrasts and enhances relationship of anatomy to function Full segmentation of 170+ brain regions more clearly defines structure boundaries than previous point-and-annotate anatomical labeling, and connectivity is mapped in a way not provided by traditional atlases