Developing Novel Diffusion MRI Methods for Comprehensive Analysis of Restricted and Anisotropic Self-diffusion System

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Publisher :
ISBN 13 : 9789174229783
Total Pages : 0 pages
Book Rating : 4.2/5 (297 download)

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Book Synopsis Developing Novel Diffusion MRI Methods for Comprehensive Analysis of Restricted and Anisotropic Self-diffusion System by : Hong Jiang

Download or read book Developing Novel Diffusion MRI Methods for Comprehensive Analysis of Restricted and Anisotropic Self-diffusion System written by Hong Jiang and published by . This book was released on 2023 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Diffusion MRI is a non-invasive imaging technique used to study the microstructural properties of biological tissues by observing the self-diffusion of water molecules. Traditional diffusion MRI methods, based on the pulsed gradient spin-echo sequence, employ magnetic field gradients to encode information about translational motion. However, this approach combines various aspects of diffusion, such as restriction, anisotropy, and flow, into a single observable, leading to interpretation ambiguities, especially in complex heterogeneous materials like living biological tissues. In this thesis, we address these challenges and push the boundaries of diffusion MRI by introducing innovative techniques for studying biological tissue microstructure. Our approach centers around the "double-rotation" technique borrowed from solid-state NMR, which generates modulated gradient waveforms, enabling us to explore the 2D frequency-anisotropy domain in-depth. By integrating this technique with oscillating gradients and tensor-valued encoding, we create a comprehensive methodology for data acquisition. Drawing inspiration from the "model-free" analytical strategies originally designed for studying rotational dynamics in macromolecules, we extend its applicability to MRI techniques for understanding diffusion in biological tissues. Through a series of proof-of-principle experiments, we validate our novel acquisition and analysis strategy across various samples. These experiments encompass the study of isotropic and anisotropic Gaussian diffusion in simple liquids, characterizing anisotropic Gaussian diffusion in a lyotropic liquid crystal with lamellar microstructure, and exploring restricted diffusion in a yeast cell sediment. Additionally, we showcase the effectiveness of our methods on ex vivo mouse brain and tumor tissue, highlighting the practical potential of our approach. Our proposed double-rotation gradient waveforms enable comprehensive sampling of both the frequency and "shape" dimensions of diffusion encoding, providing detailed insights into restriction and anisotropy in heterogeneous materials. The implications of our work extend to model-free investigations, allowing us to understand microstructural changes linked with pathology or normal brain development.

Diffusion MRI

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Publisher : Oxford University Press
ISBN 13 : 0199708703
Total Pages : 784 pages
Book Rating : 4.1/5 (997 download)

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Book Synopsis Diffusion MRI by : Derek K Jones

Download or read book Diffusion MRI written by Derek K Jones and published by Oxford University Press. This book was released on 2010-11-11 with total page 784 pages. Available in PDF, EPUB and Kindle. Book excerpt: Professor Derek Jones, a world authority on diffusion MRI, has assembled most of the world's leading scientists and clinicians developing and applying diffusion MRI to produce an authorship list that reads like a "Who's Who" of the field and an essential resource for those working with diffusion MRI. Destined to be a modern classic, this definitive and richly illustrated work covers all aspects of diffusion MRI from basic theory to clinical application. Oxford Clinical Neuroscience is a comprehensive, cross-searchable collection of resources offering quick and easy access to eleven of Oxford University Press's prestigious neuroscience texts. Joining Oxford Medicine Online these resources offer students, specialists and clinical researchers the best quality content in an easy-to-access format.

Advanced Diffusion Encoding Methods in MRI

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Publisher : Royal Society of Chemistry
ISBN 13 : 1788017269
Total Pages : 455 pages
Book Rating : 4.7/5 (88 download)

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Book Synopsis Advanced Diffusion Encoding Methods in MRI by : Daniel Topgaard

Download or read book Advanced Diffusion Encoding Methods in MRI written by Daniel Topgaard and published by Royal Society of Chemistry. This book was released on 2020-08-17 with total page 455 pages. Available in PDF, EPUB and Kindle. Book excerpt: The medical MRI community is by far the largest user of diffusion NMR techniques and this book captures the current surge of methods and provides a primary source to aid adoption in this field. There is a trend to adapting the more advanced diffusion encoding sequences developed by NMR researchers within the fields of porous media, chemical engineering, and colloid science to medical research. Recently published papers indicate great potential for improved diagnosis of the numerous pathological conditions associated with changes of tissue microstructure that are invisible to conventional diffusion MRI. This book disseminates these recent developments to the wider community of MRI researchers and clinicians. The chapters cover the theoretical basis, hardware and pulse sequences, data analysis and validation, and recent applications aimed at promoting further growth in the field. This is a fast moving field and chapters are written by key MRI scientists that have contributed to the successful translation of the advanced diffusion NMR methods to the context of medical MRI, from global locations.

Microstructural Feature-based Processing and Analysis of Diffusion Tensor MRI

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Publisher :
ISBN 13 :
Total Pages : 94 pages
Book Rating : 4.:/5 (89 download)

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Book Synopsis Microstructural Feature-based Processing and Analysis of Diffusion Tensor MRI by : Jin Kyu Gahm

Download or read book Microstructural Feature-based Processing and Analysis of Diffusion Tensor MRI written by Jin Kyu Gahm and published by . This book was released on 2014 with total page 94 pages. Available in PDF, EPUB and Kindle. Book excerpt: Tensors increasingly arise in a variety of medical imaging and image processing contexts. Diffusion tensor magnetic resonance imaging (DT-MRI) measures the self-diffusion rate of water molecules within small volumes of biological tissues to characterize their microstructural features. The diffusion tensor can be decomposed into shape and orientation components, and the shape components are intuitively and saliently characterized by tensor invariants. Hence the invariant and orientation information implies the microstructural features of tissues. The mathematical framework that freely builds tensors from tensor invariants has been recently established, and allowed for developing novel approaches for processing and analysis of diffusion tensor fields. New tensor interpolation methods are devised that linearly interpolate each of tensor invariants and orientations to preserve cardiac microstructural features. The uniform tensor invariant set is proposed that linearly characterizes tensor shape, and provides more accurate tensor field interpolation and analysis of cardiac diffusion tensor fields. A microstructural feature-based tensor distance is also defined by a linear combination of tensor invariant and orientation distances, and applied to graph-based segmentation of cardiac diffusion tensor fields. Finally, the effects of noise in DT-MRI are evaluated on tensor invariants characterizing tensor shape over the complete space of tensor shape. In addition, a new framework is developed for determining the distribution of the likely true values of tensor invariants given their noisy measures.

Anisotropy Across Fields and Scales

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Publisher : Springer Nature
ISBN 13 : 3030562158
Total Pages : 284 pages
Book Rating : 4.0/5 (35 download)

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Book Synopsis Anisotropy Across Fields and Scales by : Evren Özarslan

Download or read book Anisotropy Across Fields and Scales written by Evren Özarslan and published by Springer Nature. This book was released on 2021 with total page 284 pages. Available in PDF, EPUB and Kindle. Book excerpt: This open access book focuses on processing, modeling, and visualization of anisotropy information, which are often addressed by employing sophisticated mathematical constructs such as tensors and other higher-order descriptors. It also discusses adaptations of such constructs to problems encountered in seemingly dissimilar areas of medical imaging, physical sciences, and engineering. Featuring original research contributions as well as insightful reviews for scientists interested in handling anisotropy information, it covers topics such as pertinent geometric and algebraic properties of tensors and tensor fields, challenges faced in processing and visualizing different types of data, statistical techniques for data processing, and specific applications like mapping white-matter fiber tracts in the brain. The book helps readers grasp the current challenges in the field and provides information on the techniques devised to address them. Further, it facilitates the transfer of knowledge between different disciplines in order to advance the research frontiers in these areas. This multidisciplinary book presents, in part, the outcomes of the seventh in a series of Dagstuhl seminars devoted to visualization and processing of tensor fields and higher-order descriptors, which was held in Dagstuhl, Germany, on October 28-November 2, 2018.

Development of Methods for the Acquisition and Analysis of Diffusion Weighted MRI Data

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ISBN 13 :
Total Pages : pages
Book Rating : 4.:/5 (89 download)

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Book Synopsis Development of Methods for the Acquisition and Analysis of Diffusion Weighted MRI Data by : Marta Morgado Correia

Download or read book Development of Methods for the Acquisition and Analysis of Diffusion Weighted MRI Data written by Marta Morgado Correia and published by . This book was released on 2009 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Neuroimaging in Developmental Clinical Neuroscience

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Publisher : Cambridge University Press
ISBN 13 : 1139476750
Total Pages : 473 pages
Book Rating : 4.1/5 (394 download)

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Book Synopsis Neuroimaging in Developmental Clinical Neuroscience by : Judith M. Rumsey

Download or read book Neuroimaging in Developmental Clinical Neuroscience written by Judith M. Rumsey and published by Cambridge University Press. This book was released on 2009-02-19 with total page 473 pages. Available in PDF, EPUB and Kindle. Book excerpt: Modern neuroimaging offers tremendous opportunities for gaining insights into normative development and a wide array of developmental neuropsychiatric disorders. Focusing on ontogeny, this text covers basic processes involved in both healthy and atypical maturation, and also addresses the range of neuroimaging techniques most widely used for studying children. This book will enable you to understand normative structural and functional brain maturation and the mechanisms underlying basic developmental processes; become familiar with current knowledge and hypotheses concerning the neural bases of developmental neuropsychiatric disorders; and learn about neuroimaging techniques, including their unique strengths and limitations. Coverage includes normal developmental processes, atypical processing in developmental neuropsychiatric disorders, ethical issues, neuroimaging techniques and their integration with psychopharmacologic and molecular genetic research approaches, and future directions. This comprehensive volume is an essential resource for neurologists, neuropsychologists, psychiatrists, pediatricians, and radiologists concerned with normal development and developmental neuropsychiatric disorders.

Introduction to Functional Magnetic Resonance Imaging

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Publisher : Cambridge University Press
ISBN 13 : 0521899958
Total Pages : 479 pages
Book Rating : 4.5/5 (218 download)

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Book Synopsis Introduction to Functional Magnetic Resonance Imaging by : Richard B. Buxton

Download or read book Introduction to Functional Magnetic Resonance Imaging written by Richard B. Buxton and published by Cambridge University Press. This book was released on 2009-08-27 with total page 479 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the second edition of a useful introductory book on a technique that has revolutionized neuroscience, specifically cognitive neuroscience. Functional magnetic resonance imaging (fMRI) has now become the standard tool for studying the brain systems involved in cognitive and emotional processing. It has also been a major factor in the consilience of the fields of neurobiology, cognitive psychology, social psychology, radiology, physics, mathematics, engineering, and even philosophy. Written and edited by a clinician-scientist in the field, this book remains an excellent user's guide to t

Computational Neuroanatomy: The Methods

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Publisher : World Scientific
ISBN 13 : 9814472816
Total Pages : 424 pages
Book Rating : 4.8/5 (144 download)

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Book Synopsis Computational Neuroanatomy: The Methods by : Moo K Chung

Download or read book Computational Neuroanatomy: The Methods written by Moo K Chung and published by World Scientific. This book was released on 2012-09-05 with total page 424 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational neuroanatomy is an emerging field that utilizes various non-invasive brain imaging modalities, such as MRI and DTI, in quantifying the spatiotemporal dynamics of the human brain structures in both normal and clinical populations. This discipline emerged about twenty years ago and has made substantial progress in the past decade. The main goals of this book are to provide an overview of various mathematical, statistical and computational methodologies used in the field to a wide range of researchers and students, and to address important yet technically challenging topics in further detail.

Introduction to Diffusion Tensor Imaging

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Publisher : Academic Press
ISBN 13 : 0123984076
Total Pages : 141 pages
Book Rating : 4.1/5 (239 download)

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Book Synopsis Introduction to Diffusion Tensor Imaging by : Susumu Mori

Download or read book Introduction to Diffusion Tensor Imaging written by Susumu Mori and published by Academic Press. This book was released on 2013-08-02 with total page 141 pages. Available in PDF, EPUB and Kindle. Book excerpt: The concepts behind diffusion tensor imaging (DTI) are commonly difficult to grasp, even for magnetic resonance physicists. To make matters worse, a many more complex higher-order methods have been proposed over the last few years to overcome the now well-known deficiencies of DTI. In Introduction to Diffusion Tensor Imaging: And Higher Order Models, these concepts are explained through extensive use of illustrations rather than equations to help readers gain a more intuitive understanding of the inner workings of these techniques. Emphasis is placed on the interpretation of DTI images and tractography results, the design of experiments, and the types of application studies that can be undertaken. Diffusion MRI is a very active field of research, and theories and techniques are constantly evolving. To make sense of this constantly shifting landscape, there is a need for a textbook that explains the concepts behind how these techniques work in a way that is easy and intuitive to understand—Introduction to Diffusion Tensor Imaging fills this gap. Extensive use of illustrations to explain the concepts of diffusion tensor imaging and related methods Easy to understand, even without a background in physics Includes sections on image interpretation, experimental design, and applications Up-to-date information on more recent higher-order models, which are increasingly being used for clinical applications

Novel Frontiers of Advanced Neuroimaging

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Publisher : BoD – Books on Demand
ISBN 13 : 9535109235
Total Pages : 236 pages
Book Rating : 4.5/5 (351 download)

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Book Synopsis Novel Frontiers of Advanced Neuroimaging by : Kostas Fountas

Download or read book Novel Frontiers of Advanced Neuroimaging written by Kostas Fountas and published by BoD – Books on Demand. This book was released on 2013-01-09 with total page 236 pages. Available in PDF, EPUB and Kindle. Book excerpt: Emerging imaging modalities continuously increase the diagnostic sensitivity and accuracy of neuroimaging, and have transformed diagnostic radiology into a powerful research and clinical tool. Various novel neuroimaging modalities have become of paramount importance, not only in establishing diagnosis but also in guiding surgical intervention, and in evaluating the treatment effect. Advanced MR based techniques such as Fractional Anisotropy, Diffusion Tensor Imaging, Proton Spectroscopy, and task-generated as well as resting-state functional MRI have tremendously increased the power of the modern neuroscientist’s armamentarium. The employment of advanced neuroimaging techniques have been expanded in the scientific fields of neuropsychology, consumer’s psychology, and forensic medicine. Our current textbook presents exactly a collection of such innovative work, and explores new frontiers, and future applications of neuroimaging

Quantitative Magnetic Resonance Imaging

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Publisher : Academic Press
ISBN 13 : 0128170581
Total Pages : 1094 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Quantitative Magnetic Resonance Imaging by : Nicole Seiberlich

Download or read book Quantitative Magnetic Resonance Imaging written by Nicole Seiberlich and published by Academic Press. This book was released on 2020-11-18 with total page 1094 pages. Available in PDF, EPUB and Kindle. Book excerpt: Quantitative Magnetic Resonance Imaging is a ‘go-to’ reference for methods and applications of quantitative magnetic resonance imaging, with specific sections on Relaxometry, Perfusion, and Diffusion. Each section will start with an explanation of the basic techniques for mapping the tissue property in question, including a description of the challenges that arise when using these basic approaches. For properties which can be measured in multiple ways, each of these basic methods will be described in separate chapters. Following the basics, a chapter in each section presents more advanced and recently proposed techniques for quantitative tissue property mapping, with a concluding chapter on clinical applications. The reader will learn: The basic physics behind tissue property mapping How to implement basic pulse sequences for the quantitative measurement of tissue properties The strengths and limitations to the basic and more rapid methods for mapping the magnetic relaxation properties T1, T2, and T2* The pros and cons for different approaches to mapping perfusion The methods of Diffusion-weighted imaging and how this approach can be used to generate diffusion tensor maps and more complex representations of diffusion How flow, magneto-electric tissue property, fat fraction, exchange, elastography, and temperature mapping are performed How fast imaging approaches including parallel imaging, compressed sensing, and Magnetic Resonance Fingerprinting can be used to accelerate or improve tissue property mapping schemes How tissue property mapping is used clinically in different organs Structured to cater for MRI researchers and graduate students with a wide variety of backgrounds Explains basic methods for quantitatively measuring tissue properties with MRI - including T1, T2, perfusion, diffusion, fat and iron fraction, elastography, flow, susceptibility - enabling the implementation of pulse sequences to perform measurements Shows the limitations of the techniques and explains the challenges to the clinical adoption of these traditional methods, presenting the latest research in rapid quantitative imaging which has the possibility to tackle these challenges Each section contains a chapter explaining the basics of novel ideas for quantitative mapping, such as compressed sensing and Magnetic Resonance Fingerprinting-based approaches

Iterative Methods for Sparse Linear Systems

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Publisher : SIAM
ISBN 13 : 0898715342
Total Pages : 537 pages
Book Rating : 4.8/5 (987 download)

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Book Synopsis Iterative Methods for Sparse Linear Systems by : Yousef Saad

Download or read book Iterative Methods for Sparse Linear Systems written by Yousef Saad and published by SIAM. This book was released on 2003-04-01 with total page 537 pages. Available in PDF, EPUB and Kindle. Book excerpt: Mathematics of Computing -- General.

Diffusion MRI

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Publisher : Academic Press
ISBN 13 : 0124055095
Total Pages : 627 pages
Book Rating : 4.1/5 (24 download)

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Book Synopsis Diffusion MRI by : Heidi Johansen-Berg

Download or read book Diffusion MRI written by Heidi Johansen-Berg and published by Academic Press. This book was released on 2013-11-04 with total page 627 pages. Available in PDF, EPUB and Kindle. Book excerpt: Diffusion MRI remains the most comprehensive reference for understanding this rapidly evolving and powerful technology and is an essential handbook for designing, analyzing, and interpreting diffusion MR experiments. Diffusion imaging provides a unique window on human brain anatomy. This non-invasive technique continues to grow in popularity as a way to study brain pathways that could never before be investigated in vivo. This book covers the fundamental theory of diffusion imaging, discusses its most promising applications to basic and clinical neuroscience, and introduces cutting-edge methodological developments that will shape the field in coming years. Written by leading experts in the field, it places the exciting new results emerging from diffusion imaging in the context of classical anatomical techniques to show where diffusion studies might offer unique insights and where potential limitations lie. Fully revised and updated edition of the first comprehensive reference on a powerful technique in brain imaging Covers all aspects of a diffusion MRI study from acquisition through analysis to interpretation, and from fundamental theory to cutting-edge developments New chapters covering connectomics, advanced diffusion acquisition, artifact removal, and applications to the neonatal brain Provides practical advice on running an experiment Includes discussion of applications in psychiatry, neurology, neurosurgery, and basic neuroscience Full color throughout

Diffusion Tensor Imaging

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Publisher : Springer
ISBN 13 : 1493931180
Total Pages : 442 pages
Book Rating : 4.4/5 (939 download)

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Book Synopsis Diffusion Tensor Imaging by : Wim Van Hecke

Download or read book Diffusion Tensor Imaging written by Wim Van Hecke and published by Springer. This book was released on 2015-12-14 with total page 442 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book provides an overview of the practical aspects of diffusion tensor imaging (DTI), from understanding the basis of the technique through selection of the right protocols, trouble-shooting data quality, and analyzing DTI data optimally. DTI is a non-invasive magnetic resonance imaging (MRI) technique for visualizing and quantifying tissue microstructure based on diffusion. The book discusses the theoretical background underlying DTI and advanced techniques based on higher-order models and multi-shell diffusion imaging. It covers the practical implementation of DTI; derivation of information from DTI data; and a range of clinical applications, including neurosurgical planning and the assessment of brain tumors. Its practical utility is enhanced by decision schemes and a fully annotated DTI brain atlas, including color fractional anisotropy maps and 3D tractography reconstructions of major white matter fiber bundles. Featuring contributions from leading specialists in the field of DTI, Diffusion Tensor Imaging: A Practical Handbook is a valuable resource for radiologists, neuroradiologists, MRI technicians and clinicians.

Neuroimaging and Neurophysiology in Psychiatry

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Publisher : Oxford University Press
ISBN 13 : 0198739605
Total Pages : 161 pages
Book Rating : 4.1/5 (987 download)

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Book Synopsis Neuroimaging and Neurophysiology in Psychiatry by : David Linden

Download or read book Neuroimaging and Neurophysiology in Psychiatry written by David Linden and published by Oxford University Press. This book was released on 2016 with total page 161 pages. Available in PDF, EPUB and Kindle. Book excerpt: Neuroimaging and Neurophysiology in Psychiatry is an invaluable guide through the methods and applications of neuroimaging and neurophysiology.

Diffusion NMR of Confined Systems

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Publisher : Royal Society of Chemistry
ISBN 13 : 1782621903
Total Pages : 594 pages
Book Rating : 4.7/5 (826 download)

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Book Synopsis Diffusion NMR of Confined Systems by : Rustem Valiullin

Download or read book Diffusion NMR of Confined Systems written by Rustem Valiullin and published by Royal Society of Chemistry. This book was released on 2016-12-13 with total page 594 pages. Available in PDF, EPUB and Kindle. Book excerpt: With the increasing role of porous solids in conventional and newly emerging technologies, there is an urgent need for a deeper understanding of fluid behaviour confined to pore spaces of these materials especially with regard to their transport properties. From its early years, NMR has been recognized as a powerful experimental technique enabling direct access to this information. In the last two decades, the methodological development of different NMR techniques to assess dynamic properties of adsorbed ensembles has been progressed. This book will report on these recent advances and look at new broader applications in engineering and medicine. Having both academic and industrial relevance, this unique reference will be for specialists working in the research areas and for advanced graduate and postgraduate studies who want information on the versatility of diffusion NMR.