Design, Synthesis, and Biological Evaluation of Novel Histone Deacetylase Inhibitors as Anti-cancer Agents

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ISBN 13 :
Total Pages : 305 pages
Book Rating : 4.:/5 (126 download)

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Book Synopsis Design, Synthesis, and Biological Evaluation of Novel Histone Deacetylase Inhibitors as Anti-cancer Agents by : Ayad Abed Ali Chiad Al-Hamashi

Download or read book Design, Synthesis, and Biological Evaluation of Novel Histone Deacetylase Inhibitors as Anti-cancer Agents written by Ayad Abed Ali Chiad Al-Hamashi and published by . This book was released on 2018 with total page 305 pages. Available in PDF, EPUB and Kindle. Book excerpt: Despite major advances in cancer treatment strategies in recent years, significant limitations still remain. Selectively targeting cancer cells without affecting normal cells is a challenging task. Epigenetic modifications such as histone acetylation and methylation seem to play a crucial role in cancer pathophysiology. Histone acetylation is the most extensively studied epigenetic modification. Two groups of enzymes, histone deacetylases (HDACs) and histone acetyltransferases (HATs) control the acetylation status of histones. HDAC enzymes, which are overexpressed in many cancer tissues, provide a potential target for cancer chemotherapy. Therefore, HDAC inhibitors are currently being widely investigated as anticancer agents. Most of the current HDAC inhibitors are not selective and have toxic side effects. Selective inhibition of specific HDAC isoforms to preferentially suppress the proliferation of cancer cells is a goal yet to be achieved. Largazole is a macrocyclic, depsipeptide anticancer agent isolated from a marine cyanobacterium. It is a class I selective HDAC inhibitor. The depsipeptide cap group (CG) of largazole interacts with a less conserved area of the HDACs surface and can be targeted to develop isoform-selective HDAC inhibitors. We have used molecular modeling approaches to design several new largazole analogs with modified CGs to modulate the binding interaction with the enzyme surface. We used a novel protection/deprotection protocol to synthesize these analogs. The antiproliferative activity and HDAC isoform selectivity of the synthesized analogs were evaluated. The majority of the clinically used HDAC inhibitors are hydroxamates. Poor selectivity, poor pharmacokinetics, and severe toxic side effects are major limitations in their clinical use. There is a high need to develop new HDAC inhibitors with non-hydroxamate zinc binding groups (ZBG) with superior activity and selectivity profiles. We used molecular modeling studies to design a new class of HDAC inhibitors containing a 1-(1H-imidazol-2-yl)ethan-1-one (HIE) moiety as the ZBG. A structure-activity relationship (SAR) study was conducted by synthesizing a series of HIEs with different structural properties. Some of these compounds showed promising cell growth inhibition with GI50s in the upper nanomolar to lower micromolar range. A representative HIE compound inhibited purified HDAC enzymes with single digit micromolar IC50, with no selectivity preference among different HDAC isoforms. Replacing the ZBG with other groups such as 1-(thiazol-2-yl)ethan-1-one (TE), 1-(pyrimidin-2-yl)ethan-1-one (PE), and 1-(2-hydroxyphenyl)ethan-1-one (HPE) did not result in active compounds.

Design, Synthesis and Biological Evaluation of Anti-cancer and Anti-parasitic Histone Deacetylase Inhibitors

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ISBN 13 :
Total Pages : 0 pages
Book Rating : 4.:/5 (11 download)

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Book Synopsis Design, Synthesis and Biological Evaluation of Anti-cancer and Anti-parasitic Histone Deacetylase Inhibitors by : Katharina Stenzel

Download or read book Design, Synthesis and Biological Evaluation of Anti-cancer and Anti-parasitic Histone Deacetylase Inhibitors written by Katharina Stenzel and published by . This book was released on 2017 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt:

The Design, Synthesis, and Biological Evaluation of Selective Histone Deacetylase (HDAC) Inhibitors

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ISBN 13 :
Total Pages : 0 pages
Book Rating : 4.:/5 (137 download)

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Book Synopsis The Design, Synthesis, and Biological Evaluation of Selective Histone Deacetylase (HDAC) Inhibitors by : Joseph Knoff

Download or read book The Design, Synthesis, and Biological Evaluation of Selective Histone Deacetylase (HDAC) Inhibitors written by Joseph Knoff and published by . This book was released on 2022 with total page 0 pages. Available in PDF, EPUB and Kindle. Book excerpt: Histone deacetylase (HDAC) proteins have become an important target for the treatment of several diseases including cancers, neurodegenerative diseases and inflammatory diseases. Four such inhibitors are approved by the FDA as anti-cancer drugs, but unfortunately, they inhibit numerous HDAC isoforms which leads to side effects in clinical settings. In this work, we have developed multiple libraries of chemical biology tools that selectively inhibit a small number of HDAC proteins with the goal of decreasing the possible therapeutic side effects related to non-selective inhibition. With this, our strategy was to develop novel libraries of HDAC inhibitors based on two new types of metal binding groups that are not present in any of the FDA approved inhibitors. Several benzamide type HDAC inhibitors were synthesized across two projects, with the same goal of selectively inhibiting HDAC1. The synthesized compounds were tested in vitro and in cellular assays to determine isoform selectivity and toxicity to cancer cells. The compounds that displayed the highest selectivity in these two projects were the p-chloro N-(2-aminophenyl) benzamide, and the tryptophanyl aminobiphenyl amide, Bnz-3. These two compounds displayed 16.8- and 29-fold selectivity for HDAC1 over HDAC2, while being between 17- and 320-fold selective for HDAC1 over HDACs3-9. Furter validation of these findings was performed via docking analysis. A new series of compounds combining the unique findings of both libraries was proposed with extensive support from computational methods. In addition, another compound library bearing the trifluoromethyl ketone (TFMK) binding group was designed and synthesized, with preliminary findings of in vitro experiments detailed herin. The TFMK analogs of the FDA approved inhibitor SAHA made use of a modified metal binding group to promote selectivity for the lesser studied class IIa HDAC isoforms HDAC4, 5, 7, and 9. Docking studies of the TFMK SAHA analogs with modifications at the C2-, C3-, and C4- positions show promise towards promoting selective inhibition of class IIa HDAC isoforms. Both classes of inhibitors can be used lead compounds and as chemical tools to aid in the elucidation of the functions of specific HDAC isoforms as they relate to cancer biology.

Anticancer Agents

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Publisher : MDPI
ISBN 13 : 3036501401
Total Pages : 606 pages
Book Rating : 4.0/5 (365 download)

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Book Synopsis Anticancer Agents by : Qiao-Hong Chen

Download or read book Anticancer Agents written by Qiao-Hong Chen and published by MDPI. This book was released on 2021-03-02 with total page 606 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book is a printed edition of the Special Issue entitled “Anticancer Agents: Design, Synthesis and Evaluation” that was published in Molecules. Two review articles and thirty research papers are included in the Special Issue. Three second-generation androgen receptor antagonists that have been approved by the U.S. FDA for the treatment of prostate cancer have been reviewed. Identification of mimics of protein partners as protein-protein interaction inhibitors via virtual screening has been summarized and discussed. Anticancer agents targeting various protein targets, including IGF-1R, Src, protein kinase, aromatase, HDAC, PARP, Toll-Like receptor, c-Met, PI3Kdelta, topoisomerase II, p53, and indoleamine 2,3-dioxygenase, have been explored. The analogs of three well-known tubulin-interacting natural products, paclitaxel, zampanolide, and colchicine, have been designed, synthesized, and evaluated. Several anticancer agents representing diverse chemical scaffolds were assessed in different kinds of cancer cell models. The capability of some anticancer agents to overcome the resistance to currently available drugs was also studied. In addition to looking into the in vitro ability of the anticancer agents to inhibit cancer cell proliferation, apoptosis, and cell cycle, in vivo antitumor efficacy in animal models and DFT were also investigated in some papers.

O-alkyl Imidate Formation Via Staudinger Ligation

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ISBN 13 :
Total Pages : 214 pages
Book Rating : 4.:/5 (89 download)

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Book Synopsis O-alkyl Imidate Formation Via Staudinger Ligation by : José A. Restituyo

Download or read book O-alkyl Imidate Formation Via Staudinger Ligation written by José A. Restituyo and published by . This book was released on 2006 with total page 214 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Design, Synthesis and Biological Evaluation of Histone Deacetylase (HDAC) Inhibitors

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ISBN 13 :
Total Pages : 352 pages
Book Rating : 4.:/5 (17 download)

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Book Synopsis Design, Synthesis and Biological Evaluation of Histone Deacetylase (HDAC) Inhibitors by : Ahmed Negmeldin

Download or read book Design, Synthesis and Biological Evaluation of Histone Deacetylase (HDAC) Inhibitors written by Ahmed Negmeldin and published by . This book was released on 2017 with total page 352 pages. Available in PDF, EPUB and Kindle. Book excerpt: The dual HDAC6/8 selective inhibitors can be used as lead compounds and as a chemical tool to study HDAC related cancer biology. The observed enhancement of selectivity upon modifying the linker region of the non-selective inhibitor SAHA shows that modifying current drugs, like SAHA, could lead to substantial improvement in its pharmacodynamic properties.

The Design, Synthesis and Biological Evaluation of Novel Small-molecule HDAC Inhibitors

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ISBN 13 :
Total Pages : pages
Book Rating : 4.:/5 (16 download)

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Book Synopsis The Design, Synthesis and Biological Evaluation of Novel Small-molecule HDAC Inhibitors by : Paolo Di Fruscia

Download or read book The Design, Synthesis and Biological Evaluation of Novel Small-molecule HDAC Inhibitors written by Paolo Di Fruscia and published by . This book was released on 2012 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Design, Synthesis and Biological Evaluation of Novel Cyclin-dependent Kinase 9 Inhibitors as Anticancer Agents

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ISBN 13 :
Total Pages : 470 pages
Book Rating : 4.:/5 (125 download)

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Book Synopsis Design, Synthesis and Biological Evaluation of Novel Cyclin-dependent Kinase 9 Inhibitors as Anticancer Agents by : Hamad Musfer Alkhtani

Download or read book Design, Synthesis and Biological Evaluation of Novel Cyclin-dependent Kinase 9 Inhibitors as Anticancer Agents written by Hamad Musfer Alkhtani and published by . This book was released on 2015 with total page 470 pages. Available in PDF, EPUB and Kindle. Book excerpt:

The Design, Synthesis and Biological Evaluation of Novel Multiple Targeting Anti-cancer Agents

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ISBN 13 :
Total Pages : pages
Book Rating : 4.:/5 (932 download)

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Book Synopsis The Design, Synthesis and Biological Evaluation of Novel Multiple Targeting Anti-cancer Agents by :

Download or read book The Design, Synthesis and Biological Evaluation of Novel Multiple Targeting Anti-cancer Agents written by and published by . This book was released on 2015 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Design, Synthesis and Biological Evaluation of Novel Taxane-based Anticancer Agents and Their Applications to Tumor-targeting Drug Delivery Systems

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ISBN 13 :
Total Pages : pages
Book Rating : 4.:/5 (729 download)

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Book Synopsis Design, Synthesis and Biological Evaluation of Novel Taxane-based Anticancer Agents and Their Applications to Tumor-targeting Drug Delivery Systems by : Xianrui Zhao

Download or read book Design, Synthesis and Biological Evaluation of Novel Taxane-based Anticancer Agents and Their Applications to Tumor-targeting Drug Delivery Systems written by Xianrui Zhao and published by . This book was released on 2009 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Design, Synthesis and Biological Evaluation of Novel Tumor-targeting Taxane-based Anticancer Agents

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Publisher :
ISBN 13 : 9781109967388
Total Pages : 373 pages
Book Rating : 4.9/5 (673 download)

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Book Synopsis Design, Synthesis and Biological Evaluation of Novel Tumor-targeting Taxane-based Anticancer Agents by : Jin Chen

Download or read book Design, Synthesis and Biological Evaluation of Novel Tumor-targeting Taxane-based Anticancer Agents written by Jin Chen and published by . This book was released on 2006 with total page 373 pages. Available in PDF, EPUB and Kindle. Book excerpt: A novel series of the second-generation taxoid conjugates with o-3 polyunsaturated fatty acids (PUFA) such as docosahexanoic acid (DHA), linolenic acid (LNA) and linoleic acid (LA) has been successfully developed. The new conjugates, tested in vivo, exhibited strong activity against both resistant and sensitive colon and ovarian cancer xenografts. Two of the new conjugates (DHA-SB-T-1214 and DHA-SB-T-1213) caused the total regression of resistant and sensitive type cancers, respectively, with reduced side toxicity.

Design, Synthesis and Biological Evaluation of Novel Hydroxamic Acid Based Histone Deacetylase 6 Selective Inhibitors Bearing Phenylpyrazol Scaffold as Surface Recognition Motif

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ISBN 13 :
Total Pages : pages
Book Rating : 4.:/5 (15 download)

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Book Synopsis Design, Synthesis and Biological Evaluation of Novel Hydroxamic Acid Based Histone Deacetylase 6 Selective Inhibitors Bearing Phenylpyrazol Scaffold as Surface Recognition Motif by :

Download or read book Design, Synthesis and Biological Evaluation of Novel Hydroxamic Acid Based Histone Deacetylase 6 Selective Inhibitors Bearing Phenylpyrazol Scaffold as Surface Recognition Motif written by and published by . This book was released on 2018 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Histone Deacetylase Inhibitors in Combinatorial Anticancer Therapy

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Publisher : Springer Nature
ISBN 13 : 9811581797
Total Pages : 266 pages
Book Rating : 4.8/5 (115 download)

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Book Synopsis Histone Deacetylase Inhibitors in Combinatorial Anticancer Therapy by : Shabir Ahmad Ganai

Download or read book Histone Deacetylase Inhibitors in Combinatorial Anticancer Therapy written by Shabir Ahmad Ganai and published by Springer Nature. This book was released on 2020-11-23 with total page 266 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book reviews the latest developments in the design, synthesis, and molecular mechanism of action of Histone Deacetylase (HDAC) inhibitors in the context of potential cancer therapy. HDAC inhibitors are emerging as promising anticancer drug molecules that promote growth arrest, differentiation and apoptosis of cancer cells with tumor selective toxicity. The book begins with an overview of various epigenetic modifying enzymes that are involved in cancer transition and progression; before exploring the potential of HDACs in cancer treatment. It provides a classification of HDAC inhibitors based on their structural attributes, and addresses HDAC-induced cytotoxicity.. Lastly, it discusses and assesses the rationale behind therapies that combine HDAC inhibitors with other anticancer agents to treat solid tumors. Given its scope, it offers a valuable resource for all researchers, clinicians, and students working in formulation, drug discovery, oncology, and personalized medicine.

Design, Synthesis, and Biological Evaluation of Quinazolinone Derivatives as Histone Deacetylase (HDAC) Inhibitors

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ISBN 13 :
Total Pages : pages
Book Rating : 4.:/5 (858 download)

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Book Synopsis Design, Synthesis, and Biological Evaluation of Quinazolinone Derivatives as Histone Deacetylase (HDAC) Inhibitors by : 余兆武

Download or read book Design, Synthesis, and Biological Evaluation of Quinazolinone Derivatives as Histone Deacetylase (HDAC) Inhibitors written by 余兆武 and published by . This book was released on 2012 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Synthesis and Biological Evaluation of New HDAC Inhibitors

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Publisher :
ISBN 13 :
Total Pages : 95 pages
Book Rating : 4.:/5 (113 download)

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Book Synopsis Synthesis and Biological Evaluation of New HDAC Inhibitors by : Abdulateef Alqahtani

Download or read book Synthesis and Biological Evaluation of New HDAC Inhibitors written by Abdulateef Alqahtani and published by . This book was released on 2018 with total page 95 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cancer is the second leading cause of death in the United States of America and the entire world and the disease burden is exacerbated due to resistance to drugs that are currently in clinical use. Histone deacetylase (HDAC) enzymes are highly expressed in cancer cells and HDACs are considered viable targets for drug intervention. HDACs cleave the acetyl groups from acetylated lysine side chains of proteins and modulate crucial cellular processes including gene expression. Four HDAC inhibitors (HDACi) have been approved by the US FDA as anticancer drugs for clinical use, but these drugs have numerous side effects due to low selectivity. This study presents an attempt to develop selective HDAC inhibitors using 1-(1H-imidazol-2-yl) ethan-1-one moiety as a novel metal-binding group as possible alternative to current cancer drug treatment options. In this study, molecular modeling studies were carried out using crystal models of two different HDAC isoforms and HDLP to formulate novel HDAC inhibitors that have high selectivity. The designed analogs, 14a-g were synthesized and evaluated for biological activity. The compounds were tested for anti-proliferative activity in the NCI 60 cell lines assay. Compound 14a showed significant cell growth inhibition at 10 μM concentration with 87% mean cell growth inhibition. This compound was further tested in the dose response assay. It showed anti-proliferative activity in micro molar range against most of the cell lines while four leukemia cell lines were sensitive at sub-micro molar concentration of compound. Data from dose response assay showed that the activity improved significantly when a trifluoromethyl group is installed at the paraposition of the phenyl ring cap group and with N-methylation of the imidazole ring According to docking studies of all seven compounds 14a-g on HDLP, compounds with N-methyl imidazole rings 14a-d showed flipping of the molecule in the HDAC active site, the acetamide oxygen binding to zinc ion with a high glide score instead of the ketoimidazole moiety. This is an important observation as the methylation at this position may be used to alter and modulate the pharmacokinetic and selectivity properties of the compounds for further development as anticancer agents. Compound 14c showed anticancer activity against Hela cells at 10 μM concentration, and anti-inflammatory activity on microglial cells at sub-micro molar concentration. Although the results of the preliminary studies for anti-inflammatory activity were promising, additional biological studies are needed to validate and confirm these results.

Design, Synthesis and Biological Evaluation of Novel Taxane-based Anticancer Agents and Their Tumor Targeting Delivery

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Publisher :
ISBN 13 :
Total Pages : 584 pages
Book Rating : 4.:/5 (669 download)

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Book Synopsis Design, Synthesis and Biological Evaluation of Novel Taxane-based Anticancer Agents and Their Tumor Targeting Delivery by : Larisa Kuznetsova

Download or read book Design, Synthesis and Biological Evaluation of Novel Taxane-based Anticancer Agents and Their Tumor Targeting Delivery written by Larisa Kuznetsova and published by . This book was released on 2005 with total page 584 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Synthesis and Biological Evaluation of HDAC Inhibitors with 1-(1H-imidazol-2-yl)ethan-1-one Moiety as the Metal Binding Group

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ISBN 13 :
Total Pages : 106 pages
Book Rating : 4.:/5 (111 download)

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Book Synopsis Synthesis and Biological Evaluation of HDAC Inhibitors with 1-(1H-imidazol-2-yl)ethan-1-one Moiety as the Metal Binding Group by : Samkeliso M. Dlamini

Download or read book Synthesis and Biological Evaluation of HDAC Inhibitors with 1-(1H-imidazol-2-yl)ethan-1-one Moiety as the Metal Binding Group written by Samkeliso M. Dlamini and published by . This book was released on 2017 with total page 106 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cancer is the second leading cause of death in the United States of America and the entire world and the disease burden is exacerbated due to resistance to drugs that are currently in clinical use. Histone deacetylase (HDAC) enzymes are highly expressed in cancer cells and HDACs are considered viable targets for drug intervention. HDACs cleave the acetyl groups from acetylated lysine side chains of proteins and modulate crucial cellular processes including gene expression. Four HDAC inhibitors (HDACi) have been approved by the US FDA as anticancer drugs for clinical use, but these drugs have numerous side effects due to low selectivity. This study presents an attempt to develop selective HDAC inhibitors using a novel metal-binding group as possible alternative to current cancer drug treatment options. In this study, molecular modeling studies were carried out using crystal models of four different HDAC isoforms to formulate novel HDAC inhibitors that have high selectivity. Designed HDACi analogs were studied to understand their mode of binding to HDAC active site, channel and the rim. Designed analogs, 14a-d and 15a-b were synthesized and evaluated for biological activity. The compounds were tested for anti-proliferative activity in the sixty human tumor cell line assay at the National Cancer Institute (NCI). Compounds 14a and 15a did not show significant cell growth inhibition at 10 mM and were therefore, not selected for dose response assay. Cells treated with 14b, showed 41% mean percentage growth at 10 mM, which amounts to 59% inhibition of the growth of the 60 cell lines. Compound 14c showed 21% mean percentage growth of cells at 10 mM, amounting to 79% growth inhibition of the 60 cell lines on average. Compound 14d was active with 24% mean percentage growth of the 60 cell lines, amounting to 76% mean inhibition of the 60 cell lines. Compound 15b was the most active and showed 19% mean percentage growth of cells at 10 mM, amounting to 81% growth inhibition of the 60 cell lines on average. Compounds 14b, 14c, 14d and 15b, showed significant cell growth inhibition at 10 mM concentration and were subjected to dose response assay at the NCI. Data from the dose response assay showed that the activity improves significantly when a chlorine atom or a trifluoromethyl group is installed at the para-position of the phenyl ring cap group. N-methylation of the imidazole ring did not cause a significant improvement in the activity response, but may be useful in modulating the pharmacokinetic properties of the molecules in preclinical development of the compounds as anticancer agents. This study shows that some of the compounds are more selective towards some cancer cell types. In preliminary biological studies, compound 14c was found to cause mitotic arrest of Hela cells. Further biological studies to elucidate the mechanism of action of these compounds are a future objective. This will complete the study and move our compounds to the next level of testing.