Comparing The Reproductive Success Of Yakima River Hatchery And Wild Origin Spring Chinook Yakima Klickitat Fisheries Project Monitoring And Evaluation 2001 2002 Annual Report

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Comparing the Reproductive Success of Yakima River Hatchery- and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report

Author : Steven L. Schroder
Publisher :
ISBN 13 :
Total Pages : 50 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Comparing the Reproductive Success of Yakima River Hatchery- and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report by : Steven L. Schroder

Download or read book Comparing the Reproductive Success of Yakima River Hatchery- and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report written by Steven L. Schroder and published by . This book was released on 2003 with total page 50 pages. Available in PDF, EPUB and Kindle. Book excerpt: In 2001 hatchery- and wild-origin spring chinook were placed into an observation stream located at the Cle Elum Supplementation Research Facility to compare their reproductive success. Two groups containing both wild- and hatchery fish of both sexes were brought into the stream and allowed to spawn. Their longevity, spawning participation, and reproductive success were assessed. In addition, wild- and hatchery-origin precocious males were also introduced into one of the sections and allowed to spawn. We found that hatchery and wild males generally lived longer than females. In one group hatchery and wild females lived for similar periods of time while in the other wild females lived longer than hatchery fish. Wild females were also more successful at burying their eggs and the eggs they buried had higher survival rates. This result occurred in both groups of fish. Spawning participation in males was estimated by using two statistics referred to as percent gonad depletion (PGD) and percent testes retention (PRT). Both of these measures assumed that loss of testes weight in males would reflect their spawning participation and therefore could be used to estimate reproductive success. Hatchery and wild males had similar PGD and PRT values. One of these measures, PRT, was negatively associated with male reproductive success, confirming the idea that reduction in testes weight can be used as a surrogate measure of a male's ability to produce offspring Fry from the observation stream were collected throughout the emergence period that ran from January through May. Proportionate sub-samples of these fish were removed and microsatellite DNA was extracted from them. Pedigree analyses were performed to ascertain which adult fish had produced them. These analyses disclosed that wild males were more successful at producing progeny in one of the groups. No difference occurred in the other group. Precocial males and jacks fathered fewer progeny than did fish maturing at ages 4 and 5. In addition, male reproductive success was more than twice as variable as that seen in females. Some males apparently never spawned and others produced more than 7,000 offspring an amount that was more than double the quantity generated by the most successful female. Behavioral observations showed that a number of factors besides male origin influenced their reproductive success. One was relative body size; larger males tended to dominate smaller opponents and therefore had greater access to females. However, male dominance was not always related to relative size. The ability to attack and chase opponents was, however, positively related to reproductive success. We also discovered that the reproductive status of females and the social status of males were often reflected by their nuptial coloration. Territorial females typically had a single broad purple black stripe, light green or brown backs and white or gray ventral surfaces. Dominate males on the other hand, were generally a uniform dark brown or black color. The percentage of time that a male possessed a dark color pattern was positively linked to his reproductive success, as was the percentage of time he was observed courting or defending a female. The number of times a male was chased or attacked by a female also affected his reproductive success, in this situation the greater the frequency of such attacks the lower the reproductive success of the male. The pedigree analyses also disclosed that both hatchery and wild precocious males were able to fertilize eggs and produce offspring under natural spawning conditions. In conclusion we found differences in the reproductive competency of hatchery- and wild origin spring chinook. Wild females were better at depositing their eggs and having those eggs produce fry. In one study group wild males were more successful at producing offspring than hatchery males. Additional replications of such evaluations are being carried out to determine if the differences seen can be replicated. A repeat of the work done in 2001, for example, was performed in 2002 and additional studies will take place this coming year.

Comparing the Reproductive Success of Yakima River Hatchery- and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report

Author : C. M. Knudsen
Publisher :
ISBN 13 :
Total Pages : 40 pages
Book Rating : 4.:/5 (316 download)

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Download or read book Comparing the Reproductive Success of Yakima River Hatchery- and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report written by C. M. Knudsen and published by . This book was released on 2005 with total page 40 pages. Available in PDF, EPUB and Kindle. Book excerpt: A growing body of literature suggests that adult salmon produced by artificial culture are not as reproductively successful as wild fish when they spawn under natural conditions. Behavioral, morphological, and physiological divergences have been observed between hatchery and wild fish. These disparities are the likely proximate causes of the differences seen in the reproductive success of hatchery and wild salmonids. Two evolutionary paradigms have been proposed to explain why salmonids cultured in hatcheries are genetically and phenotypically different from wild cohorts. The first proposes that natural selection has been significantly relaxed in hatcheries. Consequently, fish that normally would have perished because of the possession of unsuitable traits are able to survive. If these traits have a genetic basis, they may become established in a hatchery population and cause its productivity to be less than expected if the fish are once again exposed to natural selection pressures. The second theorizes that environmental and social conditions in hatcheries are less variable than in the natural environment and that these conditions will remain relatively constant from one generation to the next. In this circumstance, selection for genetic traits that adapt fish to artificial culture will become prevalent in the population. Such traits may be mal-adaptive under natural conditions. Many of the studies that have compared the reproductive success (RS) of hatchery and wild fish, however, have used non-local hatchery fish that have experienced multiple generations of hatchery culture. Few efforts have been made where both the hatchery and wild fish have originated from the same population. When such studies have been performed differences in the competency of the fish to produce offspring have not been detected or are not as great as those expressed when non-local hatchery fish have been used. The hatchery spring Chinook produced by the Yakima Fisheries Project originated from wild fish returning to the upper Yakima River. When they return as adults, almost all of them will spawn naturally in the Yakima River. The offspring they produce are expected to augment the Yakima spring Chinook population. Whether such an increase will occur or how great it may be depends on two factors, the ability of hatchery fish to reproduce under natural conditions and the capacity of their offspring to survive to maturity. One of the objectives of the Yakima Fisheries Project is to determine whether the hatchery-origin adults produced by the project have experienced any reduction in their ability to reproduce under natural conditions. To accomplish that objective an observation stream was built in 2000 on the grounds of the Cle Elum Supplementation and Research Facility. Beginning in 2001 hatchery and wild spring Chinook from the upper Yakima River stock have been introduced into the stream and allowed to reproduce. Microsatellite DNA is used to establish the genetic relationships between the adults placed into the stream and fry that are produced by each population. Six populations consisting of mixtures of wild and hatchery fish have been placed into the stream. Pedigree assessments have been completed on five of them. These assessments have shown that the reproductive success in males is often twice as variable as that experienced by females. In the five populations so far examined; wild males (age 4 and 5) produced the most offspring. The success of comparable hatchery males relative to wild males ranged from 37% to 113%. Hatchery and wild males maturing as 3-yr-olds (jacks) and as 1- and 0-yr-olds (precocious males) were also used in the study populations. They were not as successful at producing offspring as the larger hatchery and wild males. During 2001 and 2002 two populations of hatchery and wild fish were placed into the observation stream each year. Each one occupied about half of the structure. In these populations wild females exhibited a superior capacity to deposit eggs. In addition, their eggs survived to the fry stage at higher rates. This survival advantage ranged from 1.9 to 11.7%. In 2003 the entire observation stream was made available to a single population of fish in an effort to reduce intrasexual competition among the females for redd locations. In this year, hatchery females were better at depositing eggs (12.5%) and their buried eggs also achieved a higher egg-to-fry survival rate (3.4%). This suggests that at low population levels hatchery females were as competent as wild fish in burying eggs and in producing fry. Although variation in the reproductive success of females was lower than that seen in males it could be quite variable. For example, coefficient of variation values calculated on female RS ranged from 34 to 77% in the populations we examined. Numerous factors may affect RS in females.

Comparing the Reproductive Success of Yakima River Hatchery-and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2000-2001 Annual Report

Author : J. A. Rau
Publisher :
ISBN 13 :
Total Pages : 49 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Comparing the Reproductive Success of Yakima River Hatchery-and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2000-2001 Annual Report by : J. A. Rau

Comparing the Reproductive Success of Yakima River Hatchery and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 4 of 7, 2003-2004 Annual Report

Author : B. D. Watson
Publisher :
ISBN 13 :
Total Pages : 31 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Comparing the Reproductive Success of Yakima River Hatchery and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 4 of 7, 2003-2004 Annual Report by : B. D. Watson

Download or read book Comparing the Reproductive Success of Yakima River Hatchery and Wild-Origin Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 4 of 7, 2003-2004 Annual Report written by B. D. Watson and published by . This book was released on 2004 with total page 31 pages. Available in PDF, EPUB and Kindle. Book excerpt: In September of 2003, twenty-nine hatchery and twenty-eight wild spring chinook adults were placed into the observation stream located at the Cle Elum Supplementation Research Facility. In, addition 20 precocious males, 7 hatchery and 13 wild, were simultaneously released into the structure. As in previous years, the fish had small amounts of fin material removed prior to being introduced into the stream so that microsatellite DNA based pedigree analyses could be performed on their subsequent progeny. The entire 127 m long by 7.9 m wide stream was made available to this group of fish. Continuous behavioral observations were made while the females prepared nests and spawned. Moreover, standard measurements of adult longevity, spawning participation, water velocity, redd sizes, gravel composition, water temperature and flow were taken. Fry produced from these fish started to emigrate from the stream in early January 2004. They were trapped and sub-sampled for later microsatellite DNA analyses. In mid May of 2004 fry emergence from the channel was complete and residual fish were captured by seine and electro-fishing so that the entire juvenile population could be proportionately sampled. Audiotape records of the behavior of wild and hatchery adults spawning in the observation stream in 2001 were transcribed into continuous ethograms. Courting, agonistic, and location data were extracted from these chronological records and analyzed to characterize the reproductive behavior of both hatchery and wild fish. In addition, a ''gold standard'' pedigree analysis was completed on the fry originating from the adults placed into the observation stream in 2001. Behavioral and morphological data collected on hatchery and wild males were linked to the results of the pedigree analysis to ascertain what factors affected their reproductive success (RS) or capacity to produce fry. Individual RS values were calculated for each male placed into the observation stream and the coefficient of variation calculated from these values was greater than 100%. To determine what might be responsible for this degree of variation we examined the relative importance of a variety of physical and behavioral traits. Relative body size, for example, was found not be an important predictor of reproductive success. Instead, the capacity to court females and dominate sexual rivals was directly associated with male RS. However, males that had low dominance scores were also successful at producing offspring. These individuals utilized alternative behavioral strategies to gain close proximity to females and were successful in their attempts to fertilize eggs. Observations made on the color patterns of males showed dominance was closely linked with the possession of an overall black or dark brown color pattern. In addition, we discovered that males that had multiple mates achieved higher RS values than those who spawned with fewer females. The approach we are taking to compare the reproductive competency of hatchery and wild fish is to first determine the factors that are strongly linked to reproductive behavior and then assess whether significant differences occur in the expression of these traits based on the fish origin. Transcriptions of audiotapes are continuing and a second gold standard pedigree analyses on the fry produced from adults placed into the observation stream in 2002 is nearing completion. Future work will be directed at discovering the factors that affect female RS values. In the fall of 2004 we will again liberate hatchery and wild fish simultaneously into the entire observation stream to continue our efforts to objectively determine if differences in RS are caused by fish origin.

จุลินทรีย์และกิจกรรมในดิน

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ISBN 13 :
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Book Synopsis จุลินทรีย์และกิจกรรมในดิน by :

Download or read book จุลินทรีย์และกิจกรรมในดิน written by and published by . This book was released on 1981 with total page pages. Available in PDF, EPUB and Kindle. Book excerpt:

Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report

Download Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report PDF Online Free

Author : Curtis M. Knudsen
Publisher :
ISBN 13 :
Total Pages : 86 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report by : Curtis M. Knudsen

Download or read book Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report written by Curtis M. Knudsen and published by . This book was released on 2003 with total page 86 pages. Available in PDF, EPUB and Kindle. Book excerpt: This report is intended to satisfy two concurrent needs: (1) provide a contract deliverable from Oncorh Consulting to the Washington Department of Fish and Wildlife (WDFW), with emphasis on identification of salient results of value to ongoing Yakima/Klickitat Fisheries Project (YKFP) planning, and (2) summarize results of research that have broader scientific relevance. This is the second in a series of reports that address reproductive ecological research and monitoring of spring chinook in the Yakima River basin. In addition to within-year comparisons, between-year comparisons will be made to determine if traits of the wild Naches basin control population, the naturally spawning population in the upper Yakima River and the hatchery control population are diverging over time. This annual report summarizes data collected between April 1, 2002 and March 31, 2003. In the future, these data will be compared to previous years to identify general trends and make preliminary comparisons. Supplementation success in the Yakima Klickitat Fishery Project's (YKFP) spring chinook (Oncorhynchus tshawytscha) program is defined as increasing natural production and harvest opportunities, while keeping adverse ecological interactions and genetic impacts within acceptable bounds (Busack et al. 1997). Within this context demographics, phenotypic traits, and reproductive ecology have significance because they directly affect natural productivity. In addition, significant changes in locally adapted traits due to hatchery influence, i.e. domestication, would likely be maladaptive resulting in reduced population productivity and fitness (Taylor 1991; Hard 1995). Thus, there is a need to study demographic and phenotypic traits in the YKFP in order to understand hatchery and wild population productivity, reproductive ecology, and the effects of domestication (Busack et al. 1997). Tracking trends in these traits over time is also a critical aspect of domestication monitoring (Busack et al. 2002) to determine whether trait changes have a genetic component and, if so, are they within acceptable limits. Each chapter of this report deals with monitoring phenotypic and demographic traits of Yakima River basin spring chinook comparing hatchery and wild returns in 2002; the second year of adult hatchery returns. The first chapter deals specifically with adult traits of American River, Naches basin (excluding the American River), and upper Yakima River spring chinook, excluding gametes. The second chapter examines the gametic traits and progeny produced by upper Yakima River wild and hatchery origin fish. In the third chapter, we describe work begun initially in 2002 to characterize and compare redds of naturally spawning wild and hatchery fish in the upper Yakima River.

Comparing the Reproductive Success of Yakima River Hatchery and Wild-origin Spring Chinook

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ISBN 13 :
Total Pages : 104 pages
Book Rating : 4.:/5 (319 download)

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Book Synopsis Comparing the Reproductive Success of Yakima River Hatchery and Wild-origin Spring Chinook by :

Download or read book Comparing the Reproductive Success of Yakima River Hatchery and Wild-origin Spring Chinook written by and published by . This book was released on 2003 with total page 104 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 3 of 7, 2003-2004 Annual Report

Author : Curtis Knudsen
Publisher :
ISBN 13 :
Total Pages : 95 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 3 of 7, 2003-2004 Annual Report by : Curtis Knudsen

Download or read book Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 3 of 7, 2003-2004 Annual Report written by Curtis Knudsen and published by . This book was released on 2004 with total page 95 pages. Available in PDF, EPUB and Kindle. Book excerpt: This is the third in a series of annual reports that address reproductive ecological research and comparisons of hatchery and wild origin spring chinook in the Yakima River basin. Data have been collected prior to supplementation to characterize the baseline reproductive ecology, demographics and phenotypic traits of the unsupplemented upper Yakima population, however this report focuses on data collected on hatchery and wild spring chinook returning in 2003; the third year of hatchery adult returns. This report is organized into three chapters, with a general introduction preceding the first chapter and summarizes data collected between April 1, 2003 and March 31, 2004 in the Yakima basin. Summaries of each of the chapters in this report are included below. A major component of determining supplementation success in the Yakima Klickitat Fishery Project's spring chinook (Oncorhynchus tshawytscha) program is an increase in natural production. Within this context, comparing upper Yakima River hatchery and wild origin fish across traits such as sex ratio, age composition, size-at-age, fecundity, run timing and gamete quality is important because these traits directly affect population productivity and individual fish fitness which determine a population's productivity.

Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report

Author : Steven L. Schroder
Publisher :
ISBN 13 :
Total Pages : 89 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report by : Steven L. Schroder

Download or read book Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report written by Steven L. Schroder and published by . This book was released on 2005 with total page 89 pages. Available in PDF, EPUB and Kindle. Book excerpt: This report is intended to satisfy two concurrent needs: (1) provide a contract deliverable from Oncorh Consulting to the Washington Department of Fish and Wildlife (WDFW), with emphasis on identification of salient results of value to ongoing Yakima/Klickitat Fisheries Project (YKFP) planning and (2) summarize results of research that have broader scientific relevance. This is the fourth in a series of reports that address reproductive ecological research and monitoring of spring chinook populations in the Yakima River basin. This annual report summarizes data collected between April 1, 2004 and March 31, 2005 and includes analyses of historical baseline data, as well. Supplementation success in the Yakima Klickitat Fishery Project's (YKFP) spring chinook (Oncorhynchus tshawytscha) program is defined as increasing natural production and harvest opportunities, while keeping adverse ecological interactions and genetic impacts within acceptable bounds (Busack et al. 1997). Within this context demographics, phenotypic traits, and reproductive ecology have significance because they directly affect natural productivity. In addition, significant changes in locally adapted traits due to hatchery influence, i.e. domestication, would likely be maladaptive resulting in reduced population productivity and fitness (Taylor 1991; Hard 1995). Thus, there is a need to study demographic and phenotypic traits in the YKFP in order to understand hatchery and wild population productivity, reproductive ecology, and the effects of domestication (Busack et al. 1997). Tracking trends in these traits over time is also a critical aspect of domestication monitoring (Busack et al. 2004) to determine whether trait changes have a genetic component and, if so, are they within acceptable limits. The first chapter of this report compares first generation hatchery and wild upper Yakima River spring chinook returns over a suite of life-history, phenotypic and demographic traits. The second chapter deals specifically with identification of putative populations of wild spring chinook in the Yakima River basin based on differences in quantitative and genetic traits. The third chapter is a progress report on gametic traits and progeny produced by upper Yakima River wild and hatchery origin fish spawned in 2004 including some comparisons with Little Naches River fish. In the fourth chapter, we present a progress report on comparisons naturally spawning wild and hatchery fish in the upper Yakima River and in an experimental spawning channel at CESRF in 2004. The chapters in this report are in various stages of development. Chapters One and Two will be submitted for peer reviewed publication. Chapters Three and Four should be considered preliminary and additional fieldwork and/or analysis are in progress related to these topics. Readers are cautioned that any preliminary conclusions are subject to future revision as more data and analytical results become available.

Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2005-2006 Annual Report

Author : Steven L. Schroder
Publisher :
ISBN 13 :
Total Pages : 57 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2005-2006 Annual Report by : Steven L. Schroder

Download or read book Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2005-2006 Annual Report written by Steven L. Schroder and published by . This book was released on 2006 with total page 57 pages. Available in PDF, EPUB and Kindle. Book excerpt: This report covers three of many topics under the Yakima/Klickitat Fisheries Project's Monitoring and Evaluation Program (YKFPME) and was completed by Oncorh Consulting as a contract deliverable to the Yakama Nation and Washington Department of Fish and Wildlife. The YKFPME (Project Number 1995-063-25) is funded under two BPA contracts, one for the Yakama Nation (Contract No. 00022449) and the other for the Washington Department of Fish and Wildlife (Contract No. 22370). A comprehensive summary report for all of the monitoring and evaluation topics will be submitted after all of the topical reports are completed. This approach to reporting enhances the ability of people to get the information they want, enhances timely reporting of results, and provides a condensed synthesis of the whole YKFPME.

Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook and Juvenile-to-Adult PIT-tag Retention ; Yakima

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ISBN 13 :
Total Pages : 86 pages
Book Rating : 4.:/5 (684 download)

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Book Synopsis Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook and Juvenile-to-Adult PIT-tag Retention ; Yakima by :

Download or read book Reproductive Ecology of Yakima River Hatchery and Wild Spring Chinook and Juvenile-to-Adult PIT-tag Retention ; Yakima written by and published by . This book was released on 2002 with total page 86 pages. Available in PDF, EPUB and Kindle. Book excerpt: This report is intended to satisfy two concurrent needs: (1) provide a contract deliverable from Oncorh Consulting to the Washington Department of Fish and Wildlife (WDFW), with emphasis on identification of salient results of value to ongoing Yakima/Klickitat Fisheries Project (YKFP) planning, and (2) summarize results of research that have broader scientific relevance. This is the first in an anticipated series of reports that address reproductive ecological research and monitoring of spring chinook in the Yakima River basin. In addition to within-year comparisons, between-year comparisons will be made to determine if traits of the wild Naches basin control population, the naturally spawning population in the upper Yakima River and the hatchery control population are diverging over time. This annual report summarizes data collected between April 1, 2001 and March 31, 2002. In the future, these data will be compared to previous years to identify general trends and make preliminary comparisons.

Yakima/Klickitat Fisheries Project Genetic Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report

Download Yakima/Klickitat Fisheries Project Genetic Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report PDF Online Free

Author : Craig A. Busack
Publisher :
ISBN 13 :
Total Pages : 120 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Yakima/Klickitat Fisheries Project Genetic Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report by : Craig A. Busack

Download or read book Yakima/Klickitat Fisheries Project Genetic Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report written by Craig A. Busack and published by . This book was released on 2003 with total page 120 pages. Available in PDF, EPUB and Kindle. Book excerpt: In chapter 1 we report on studies of the population genetic structure, using DNA microsatellites, of steelhead collected from different locations in the Yakima River basin (Roza Dam, Ahtanum Creek, Toppenish Creek, and Satus Creek) in 2000 and 2001. Of 28 pairwise tests of genotypic differentiation, only the 2000 and 2001 Roza Dam collections and the 2000 and 2001 Satus Creek collections did not exhibit significant differences. Similarly, pairwise tests of genetic differentiation (FST) were significant for all comparisons except the between-years comparisons of Roza Dam, Toppenish Creek, and Satus Creek collections. All tests between populations sampled from different localities were significant, indicating that these collections represent genetically differentiated stocks. In chapter 2 we report on genetic comparisons, again using microsatellites, of the three spring chinook populations in the Yakima basin (Upper Yakima, Naches, and American) with respect to our ability to be able to estimate the proportions of the three populations in mixed smolt samples collected at Chandler. We evaluated this both in terms of mixed fishery analysis, where proportions are estimated, but the likely provenance of any particular fish is unknown, and classification, where an attempt is made to assign individual fish to their population of origin. Simulations were done over the entire ranged of stock proportions observed in the Yakima basin in the last 20+ years. Stock proportions can be estimated very accurately by either method. Chapter 3 reports on our ongoing effort at cryopreserving semen from wild Upper Yakima spring chinook. In 2002, semen from 91 males, more than 50% of those spawned, was cryopreserved. Representation over the spawning season was excellent. Chapters 4,5, and 6 all relate to the continuing development of the domestication study design. Chapter 4 details the ISRP consultations and evolution of the design from last year's preferred alternative to the current plan of using the Naches population as a wild control, and maintaining a hatchery-only control line alongside the supplemented line. During discussions this year a major issue was the possible impact to the research and to the supplementation effort, of gene flow from precocious males from the hatchery control line into the supplemented line. At the end of the contracting period, this issue still had not been resolved. Along with the discussion of development of the domestication research design, chapter 4 presents the current monitoring plan document, with discussion of the approach to the various traits to be analyzed. Chapters 5 and 6 deal with experimental power of the domestication monitoring design. There is still much work to be done on power, but in chapter 5 we explore our power to detect differences among the three lines for traits measured on individual adults. Power was found to be quite good for effects of 5% per generation over three generations for traits having a coefficient of variation (CV) of 10-20%, but low if the CV was 50%. Power is higher for comparisons between the hatchery control line and supplemented line than between the supplemented line and the wild control, a consequence of trying to avoid heavy impacts to the Naches population. Power could be improved considerably improved by sampling more Naches fish in years of high abundance. Chapter 6 presents the same power analysis, but attempts to explore the effect of precocious males from the hatchery control line spawning in the wild. It is clear that if gene flow from precocious males is more than one or two percent that the between line comparisons will be biased, making the supplemented line appear to be more similar to the hatchery control line than it should and more different from the wild control line than it should. However, it was also clear that more analysis is desirable, as the heightened or diminished power is really just an enhancement or reduction of a real difference. A more straightforward analysis of the proportion of observed differences that can be attributed to precocious gene flow needs to be done.

Yakima/Klickitat Fisheries Project Genetic Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 1 of 7, 2003-2004 Annual Report

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Author : Craig A. Busack
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ISBN 13 :
Total Pages : 153 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Yakima/Klickitat Fisheries Project Genetic Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 1 of 7, 2003-2004 Annual Report by : Craig A. Busack

Download or read book Yakima/Klickitat Fisheries Project Genetic Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 1 of 7, 2003-2004 Annual Report written by Craig A. Busack and published by . This book was released on 2004 with total page 153 pages. Available in PDF, EPUB and Kindle. Book excerpt: Genetic work for 2003, as in previous years, was quite diverse. In chapter 1 we report on the use of DNA microsatellite markers to sex spring chinook collected at Roza. We have learned through comparison of sex determinations at Roza and then at CESRF that sexing green fish on the basis of morphology is somewhat inaccurate, and accurate sexing of fish at Roza is needed to estimate sex ratios of fish on the spawning grounds. Using DNA microsatellite markers, sexing accuracy was high, but not perfect. In chapter 2 we report on new genetic risk concepts currently being developed and their implications for the YKFP spring chinook program. The impact on domestication of gene flow between the natural and hatchery spawning components is now much better understood. It is now possible to compare the risk of different hatchery programs much more quantitatively in the past. Thus, we can now make good predictions of how much less domesticating the Yakima spring chinook supplementation effort is than other programs. In chapter 3 we present the initial results of morphological comparisons of adult (1) hatchery-origin Upper Yakima spring chinook, (2) natural-origin U. Yakima spring chinook, and (3) Naches spring chinook. Canonical variate analysis allowed both sexes of the three groups to be classified correctly with over accuracy. The differences are subtle, but hatchery-origin fish appear to be someone thinner than natural-origin fish. This is consistent with observations of hatchery vs wild morphology in coho. In chapter 4 we describe the ongoing work to refine the Domestication Research/Monitoring Plan. Work for last year included analysis of the impact of HC line precocious males spawning in the wild, development of a misting incubation system for off-site incubation of Naches eggs, and refinement of some aspects of experimental design. The misting incubation system has broad applicability outside the project. The most recent version of the domestication monitoring plan is included as an appendix. In chapter 5 we present a final report on computer simulations of factorial mating designs. Using three different schemes for combining breeding values of fish, we found that full factorial mating offers a substantial increase in effective size over single-pair mating. Although full factorial mating may be too difficult logistically, but a significant proportion of the full factorial mating advantage can be obtained by using 2 x 2 partial factorials. We have developed a method that allows us to determine the relative effective size advantage of mixed partial factorial designs. In chapter 6 we report on an analysis of stock origin of smolts collected at Chandler. The 702 Chinook salmon smolts collected at the Chandler trap in 2003 were screened at 12 microsatellite DNA loci. A new Yakima basin baseline, consisting of spring chinook from the upper Yakima, Naches, and American River populations and fall chinook from the Marion Drain and lower Yakima populations, was created for these same 12 loci. DNA template problems with the tissue collections from the Naches, and American River populations prompted the omission of four loci prior to analysis. The results indicated: 80% Naches spring, 13% American River spring, 7% upper Yakima spring, and less than 1% for the two fall populations combined. The estimated stock proportions in the 2003 Chandler collection differed substantially from those for the 2002 collection. The temporal pattern of sampling in both Chandler smolt collections was not proportional to the observed outmigration in each year, suggesting that both of these estimates should be regarded with caution. Strengthening of the baseline data set will be a high priority for future work with Chandler smolts.

Yakima/Klickitat Fisheries Project; Washington Department of Fish and Wildlife Policy/Technical Involvement and Planning, 2001-2002 Annual Report

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Author : Todd N. Pearsons
Publisher :
ISBN 13 :
Total Pages : 18 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Yakima/Klickitat Fisheries Project; Washington Department of Fish and Wildlife Policy/Technical Involvement and Planning, 2001-2002 Annual Report by : Todd N. Pearsons

Download or read book Yakima/Klickitat Fisheries Project; Washington Department of Fish and Wildlife Policy/Technical Involvement and Planning, 2001-2002 Annual Report written by Todd N. Pearsons and published by . This book was released on 2003 with total page 18 pages. Available in PDF, EPUB and Kindle. Book excerpt: The Yakima/Klickitat Fisheries Project (YKFP) is a supplementation project sponsored by the Northwest Power Planning Council (Columbia River Basin Fish and Wildlife Program 1994, Measure 7.4K). The objectives of the YKFP are: (1) to test the hypothesis that new supplementation techniques can be used in the Yakima River Basin to increase natural production and to improve harvest opportunities while maintaining the long-term genetic fitness of the wild and native salmonid populations and keeping adverse ecological interactions within acceptable limits (Yakima Fisheries Project Final Environment Impact Statement, 1996); (2) provide knowledge about the use of supplementation, so that it may be used to mitigate effects on anadromous fisheries throughout the Columbia River Basin; (3) to maintain and improve the quantity and productivity of salmon and steelhead habitat, including those areas made accessible by habitat improvements; (4) to ensure that Project implementation remains consistent with the Council's Fish and Wildlife Program; and (5) to implement the Project in a prudent and environmentally sound manner. Current YKFP operations have been designed to test the principles of supplementation (Busack et al. 1997). The Project's experimental design has focused on the following critical uncertainties affecting supplementation: (1) The survival and reproductive success of hatchery fish after release from the hatchery; (2) The impacts of hatchery fish as they interact with non-target species and stocks; and, (3) The effects of supplementation on the long-term genetic fitness of fish stocks. The YKFP endorses an adaptive management policy applied through a project management framework as described in the Yakima/Klickitat Fisheries Project Planning Status Report (1995), Fast and Craig (1997), Clune and Dauble 1991. The project is managed by a Policy Group consisting of a representative of the Yakama Nation (YN, lead agency) and a representative of the Washington Department of Fish and Wildlife (WDFW). The functions of the parties are described in an MOU between the YN and the WDFW. A Scientific and Technical Advisory Committee (STAC) consisting of one representative from each management entity reports to the Policy Group and provides technical input on policy and other issues. Additional committee's, such as the Monitoring Implementation and Planning Team (MIPT), serve as the discretion of STAC. The Policy Group and STAC meet periodically (usually monthly) to conduct the business of the YKFP. Although the YKFP is an all stocks initiative (BPA 1996), most effort to date has been directed at spring chinook salmon and coho salmon. This report is a compilation of the year's activities between August 1, 2001 and July 31, 2002. All findings should be considered preliminary until data collection is completed or the information is published in a peer-reviewed journal.

Spring Chinook Salmon Interactions Indices and Residual/Precocial Monitoring in the Upper Yakima Basin; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report

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Author : Christopher L. Johnson
Publisher :
ISBN 13 :
Total Pages : 60 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Spring Chinook Salmon Interactions Indices and Residual/Precocial Monitoring in the Upper Yakima Basin; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report by : Christopher L. Johnson

Download or read book Spring Chinook Salmon Interactions Indices and Residual/Precocial Monitoring in the Upper Yakima Basin; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2001-2002 Annual Report written by Christopher L. Johnson and published by . This book was released on 2003 with total page 60 pages. Available in PDF, EPUB and Kindle. Book excerpt: This report examines some of the factors that can influence the success of supplementation, which is currently being tested in the Yakima Basin using upper Yakima stock of spring chinook salmon. Supplementation success in the Yakima Basin is defined relative to four topic areas: natural production, genetics, ecological interactions, and harvest (Busack et al. 1997). The success of spring chinook salmon supplementation in the Yakima Basin is dependent, in part, upon fish culture practices and favorable physical and biological conditions in the natural environment (Busack et al. 1997). Shortfalls in either of these two topics (i.e., failure in culturing many fish that have high long-term fitness or environmental conditions that constrain spring chinook salmon production) will cause supplementation success to be limited. For example, inadvertent selection or propagation of spring chinook that residualize or precocially mature may hinder supplementation success. Spring chinook salmon that residualize (do not migrate during the normal migration period) may have lower survival rates than migrants and, additionally, may interact with wild fish and cause unacceptable impacts to non-target taxa. Large numbers of precocials (nonanadromous spawners) may increase competition for females and significantly skew ratios of offspring sired by nonanadromous males, which could result in more nonanadromous spring chinook in future generations. Conditions in the natural environment may also limit the success of spring chinook supplementation. For example, intra or interspecific competition may constrain spring chinook salmon production. Spring chinook salmon juveniles may compete with each other for food or space or compete with other species that have similar ecological requirements. Monitoring of spring chinook salmon residuals, precocials, prey abundance, carrying capacity, and competition will help researchers interpret why supplementation is working or not working (Busack et al. 1997). Monitoring ecological interactions will be accomplished using interactions indices. Interactions indices will be used to index the availability of prey and competition for food and space. The tasks described below represent various subject areas of juvenile spring chinook salmon monitoring but are treated together because they can be accomplished using similar methods and are therefore more cost efficient than if treated separately. Three areas of investigation we pursued in this work were: (1) strong interactor monitoring (competition index and prey index), (2) carrying capacity monitoring (microhabitat monitoring); (3) residual and precocial salmon monitoring (abundance). This report is organized into three chapters to represent these three areas of investigation. Data were collected during the summer and fall, 2002 in index sections of the upper Yakima Basin (Figure 1). Hatchery reared spring chinook salmon were first released during the spring of 1999. The monitoring plan for the Yakima/Klickitat Fisheries Project calls for the continued monitoring of the variables covered in this report. All findings in this report should be considered preliminary and subject to further revision as more data and analytical results become available.

Yakima River Species Interactions Study; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 7 of 7, 2003-2004 Annual Report

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Author : Todd N. Pearsons
Publisher :
ISBN 13 :
Total Pages : 93 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Yakima River Species Interactions Study; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 7 of 7, 2003-2004 Annual Report by : Todd N. Pearsons

Download or read book Yakima River Species Interactions Study; Yakima/Klickitat Fisheries Project Monitoring and Evaluation Report 7 of 7, 2003-2004 Annual Report written by Todd N. Pearsons and published by . This book was released on 2004 with total page 93 pages. Available in PDF, EPUB and Kindle. Book excerpt: This report is intended to satisfy two concurrent needs: (1) provide a contract deliverable from the Washington Department of Fish and Wildlife (WDFW) to the Bonneville Power Administration (BPA), with emphasis on identification of salient results of value to ongoing Yakima/Klickitat Fisheries Project (YKFP) planning, and (2) summarize results of research that have broader scientific relevance. This is the twelfth of a series of progress reports that address species interactions research and supplementation monitoring of fishes in response to supplementation of salmon and steelhead in the upper Yakima River basin (Hindman et al. 1991; McMichael et al. 1992; Pearsons et al. 1993; Pearsons et al. 1994; Pearsons et al. 1996; Pearsons et al. 1998, Pearsons et al. 1999, Pearsons et al. 2001a, Pearsons et al. 2001b, Pearsons et al. 2002, Pearsons et al. 2003). Journal articles and book chapters have also been published from our work (McMichael 1993; Martin et al. 1995; McMichael et al. 1997; McMichael and Pearsons 1998; McMichael et al. 1998; Pearsons and Fritts 1999; McMichael et al. 1999; McMichael et al. 1999; Pearsons and Hopley 1999; Ham and Pearsons 2000; Ham and Pearsons 2001; Amaral et al. 2001; McMichael and Pearsons 2001; Pearsons 2002, Fritts and Pearsons 2004, Pearsons et al. in press, Major et al. in press). This progress report summarizes data collected between January 1, 2003 and December 31, 2003. These data were compared to findings from previous years to identify general trends and make preliminary comparisons. Interactions between fish produced as part of the YKFP, termed target species or stocks, and other species or stocks (non-target taxa) may alter the population status of non-target species or stocks. This may occur through a variety of mechanisms, such as competition, predation, and interbreeding (Pearsons et al. 1994; Busack et al. 1997; Pearsons and Hopley 1999). Furthermore, the success of a supplementation program may be limited by strong ecological interactions such as predation or competition (Busack et al. 1997). Our work has adapted to new information needs as the YKFP has evolved. Initially, our work focused on interactions between anadromous steelhead and resident rainbow trout (for explanation see Pearsons et al. 1993), then interactions between spring chinook salmon and rainbow trout, and recently interactions between spring chinook salmon and highly valued non-target taxa (NTT; e.g., bull trout); and interactions between strong interactor taxa (e.g., those that may strongly influence the abundance of spring chinook salmon; e.g., smallmouth bass) and spring chinook salmon. The change in emphasis to spring chinook salmon has largely been influenced by the shift in the target species planned for supplementation (Bonneville Power Administration et al. 1996; Fast and Craig 1997). Originally, steelhead and spring chinook salmon were proposed to be supplemented simultaneously (Clune and Dauble 1991). However, due in part to the uncertainties associated with interactions between steelhead and rainbow trout, spring chinook and coho salmon were supplemented before steelhead. This redirection in the species to be supplemented has prompted us to prioritize interactions between spring chinook and rainbow trout, while beginning to investigate other ecological interactions of concern. Prefacility monitoring of variables such as rainbow trout density, distribution, and size structure was continued and monitoring of other NTT was initiated in 1997. This report is organized into three chapters that represent major topics associated with monitoring stewardship, utilization, and strong interactor taxa. Chapter 1 reports the results of non-target taxa monitoring after the fifth release of hatchery salmon smolts in the upper Yakima River basin. Chapter 2 describes our tributary sampling methodology for monitoring the status of tributary NTT. Chapter 3 describes predation on juvenile salmonids by smallmouth bass and channel catfish in the lower Yakima River. The chapters in this report are in various stages of development and should be considered preliminary unless they have been published in a peer-reviewed journal. Additional field-work and/or analysis is in progress for topics covered in this report. Throughout this report, a premium was placed on presenting data in tables so that other interested parties could have access to the data. Readers are cautioned that any preliminary conclusions are subject to future revision as more data and analytical results become available.

Yakima River Species Interactions Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report

Author : Todd N. Pearsons
Publisher :
ISBN 13 :
Total Pages : 114 pages
Book Rating : 4.:/5 (316 download)

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Book Synopsis Yakima River Species Interactions Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report by : Todd N. Pearsons

Download or read book Yakima River Species Interactions Studies; Yakima/Klickitat Fisheries Project Monitoring and Evaluation, 2004-2005 Annual Report written by Todd N. Pearsons and published by . This book was released on 2005 with total page 114 pages. Available in PDF, EPUB and Kindle. Book excerpt: This report is intended to satisfy two concurrent needs: (1) provide a contract deliverable from the Washington Department of Fish and Wildlife (WDFW) to the Bonneville Power Administration (BPA), with emphasis on identification of salient results of value to ongoing Yakima/Klickitat Fisheries Project (YKFP) planning, and (2) summarize results of research that have broader scientific relevance. This is the thirteenth of a series of progress reports that address species interactions research and supplementation monitoring of fishes in response to supplementation of salmon and steelhead in the upper Yakima River basin (Hindman et al. 1991; McMichael et al. 1992; Pearsons et al. 1993; Pearsons et al. 1994; Pearsons et al. 1996; Pearsons et al. 1998, Pearsons et al. 1999, Pearsons et al. 2001a, Pearsons et al. 2001b, Pearsons et al. 2002, Pearsons et al. 2003, Pearsons et al. 2004). Journal articles and book chapters have also been published from our work (McMichael 1993; Martin et al. 1995; McMichael et al. 1997; McMichael and Pearsons 1998; McMichael et al. 1998; Pearsons and Fritts 1999; McMichael et al. 1999; McMichael et al. 1999; Pearsons and Hopley 1999; Ham and Pearsons 2000; Ham and Pearsons 2001; Amaral et al. 2001; McMichael and Pearsons 2001; Pearsons 2002, Fritts and Pearsons 2004, Pearsons et al. in press, Major et al. in press). This progress report summarizes data collected between January 1, 2004 and December 31, 2004. These data were compared to findings from previous years to identify general trends and make preliminary comparisons. Interactions between fish produced as part of the YKFP, termed target species or stocks, and other species or stocks (non-target taxa) may alter the population status of non-target species or stocks. This may occur through a variety of mechanisms, such as competition, predation, and interbreeding (Pearsons et al. 1994; Busack et al. 1997; Pearsons and Hopley 1999). Furthermore, the success of a supplementation program may be limited by strong ecological interactions such as predation or competition (Busack et al. 1997). Our work has adapted to new information needs as the YKFP has evolved. Initially, our work focused on interactions between anadromous steelhead and resident rainbow trout (for explanation see Pearsons et al. 1993), then interactions between spring chinook salmon and rainbow trout, and recently interactions between spring chinook salmon and highly valued non-target taxa (NTT; e.g., bull trout); and interactions between strong interactor taxa (e.g., those that may strongly influence the abundance of spring chinook salmon; e.g., smallmouth bass) and spring chinook salmon. The change in emphasis to spring chinook salmon has largely been influenced by the shift in the target species planned for supplementation (Bonneville Power Administration et al. 1996; Fast and Craig 1997). Originally, steelhead and spring chinook salmon were proposed to be supplemented simultaneously (Clune and Dauble 1991). However, due in part to the uncertainties associated with interactions between steelhead and rainbow trout, spring chinook and coho salmon were supplemented before steelhead. This redirection in the species to be supplemented has prompted us to prioritize interactions between spring chinook and rainbow trout, while beginning to investigate other ecological interactions of concern. Prefacility monitoring of variables such as rainbow trout density, distribution, and size structure was continued and monitoring of other NTT was initiated in 1997. This report is organized into five chapters that represent major topics associated with monitoring stewardship, utilization, and strong interactor taxa. Chapter 1 reports the results of non-target taxa monitoring after the sixth release of hatchery salmon smolts in the upper Yakima River Basin. Chapter 2 reports on the impacts of supplementation and reintroduction of salmon to trout. Chapter 2 was submitted as a manuscript to the North American Journal of Fisheries Management. Chapter 3 is an essay that describes the problems associated with popular population estimators. This essay was submitted to Fisheries magazine. Chapter 4 describes an evaluation of recovery times on mark-recapture and multiple removal population estimates. Chapter 4 was submitted to the North American Journal of Fisheries Management as a manuscript. Chapter 5, which was submitted as a manuscript to Transactions of the American Fisheries Society, describes the role of predator and prey size in evaluating predation risk by smallmouth bass in the Yakima River. The chapters in this report are in various stages of development and should be considered preliminary unless they have been published in a peer-reviewed journal. Additional field-work and/or analysis is in progress for topics covered in this report.