Biology In The Grid

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Biology in the Grid

Author : Phillip Thurtle
Publisher : U of Minnesota Press
ISBN 13 : 1452957797
Total Pages : 308 pages
Book Rating : 4.4/5 (529 download)

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Book Synopsis Biology in the Grid by : Phillip Thurtle

Download or read book Biology in the Grid written by Phillip Thurtle and published by U of Minnesota Press. This book was released on 2018-10-19 with total page 308 pages. Available in PDF, EPUB and Kindle. Book excerpt: How grids paved the way for our biological understanding of organisms As one of the most visual sciences, biology has an aesthetic dimension that lends force and persuasion to scientific arguments: how things are arranged on a page, how texts are interspersed with images, and how images are composed reflect deep-seated beliefs about how life exists on Earth. Biology in the Grid traces how our current understanding of life and genetics emerged from the pervasive nineteenth- and twentieth-century graphic form of the grid, which allowed disparate pieces of information to form what media theorist Vilém Flusser called “technical images.” Phillip Thurtle explains how the grid came to dominate biology in the twentieth century, transforming biologists’ beliefs about how organisms were constructed. He demonstrates how this shift in our understanding of biological grids enabled new philosophies in endeavors such as advertising, entertainment, and even political theory. The implications of the arguments in Biology in the Grid are profound, touching on matters as fundamental as desire, our understanding of our bodies, and our view of how society is composed. Moreover, Thurtle’s beautifully written, tightly focused arguments allow readers to apply his claims to new disciplines and systems. Bristling with insight and potential, Biology in the Grid ultimately suggests that such a grid-organized understanding of natural life inevitably has social and political dimensions, with society recognized as being made of interchangeable, regulated parts rather than as an organic whole.

Grid Computing in Life Science

Author : Akihiko Konagaya
Publisher : Springer Science & Business Media
ISBN 13 : 3540252088
Total Pages : 198 pages
Book Rating : 4.5/5 (42 download)

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Book Synopsis Grid Computing in Life Science by : Akihiko Konagaya

Download or read book Grid Computing in Life Science written by Akihiko Konagaya and published by Springer Science & Business Media. This book was released on 2005-03-07 with total page 198 pages. Available in PDF, EPUB and Kindle. Book excerpt: This book constitutes the thoroughly refereed postproceedings of the First International Life Science Grid Workshop, LSGRID 2004, held in Kanazawa, Japan in May/ June 2004. The 10 revised full papers and 5 invited papers presented were carefully selected and went through two rounds of reviewing and revision. Among the topics addressed are grid environment for bioinformatics, grid architectures, database federation, proteome annotation, grid workflow software, functional genome annotation, protein classification, tree inference, parallel computing, high performance computing, grid infrastructures, functional genomics, and evolutionary algorithms.

Parallel Computing for Bioinformatics and Computational Biology

Author : Albert Y. Zomaya
Publisher : John Wiley & Sons
ISBN 13 : 0471718483
Total Pages : 817 pages
Book Rating : 4.4/5 (717 download)

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Book Synopsis Parallel Computing for Bioinformatics and Computational Biology by : Albert Y. Zomaya

Download or read book Parallel Computing for Bioinformatics and Computational Biology written by Albert Y. Zomaya and published by John Wiley & Sons. This book was released on 2006-04-21 with total page 817 pages. Available in PDF, EPUB and Kindle. Book excerpt: Discover how to streamline complex bioinformatics applications with parallel computing This publication enables readers to handle more complex bioinformatics applications and larger and richer data sets. As the editor clearly shows, using powerful parallel computing tools can lead to significant breakthroughs in deciphering genomes, understanding genetic disease, designing customized drug therapies, and understanding evolution. A broad range of bioinformatics applications is covered with demonstrations on how each one can be parallelized to improve performance and gain faster rates of computation. Current parallel computing techniques and technologies are examined, including distributed computing and grid computing. Readers are provided with a mixture of algorithms, experiments, and simulations that provide not only qualitative but also quantitative insights into the dynamic field of bioinformatics. Parallel Computing for Bioinformatics and Computational Biology is a contributed work that serves as a repository of case studies, collectively demonstrating how parallel computing streamlines difficult problems in bioinformatics and produces better results. Each of the chapters is authored by an established expert in the field and carefully edited to ensure a consistent approach and high standard throughout the publication. The work is organized into five parts: * Algorithms and models * Sequence analysis and microarrays * Phylogenetics * Protein folding * Platforms and enabling technologies Researchers, educators, and students in the field of bioinformatics will discover how high-performance computing can enable them to handle more complex data sets, gain deeper insights, and make new discoveries.

Single-Cell-Based Models in Biology and Medicine

Author : Alexander Anderson
Publisher : Springer Science & Business Media
ISBN 13 : 376438123X
Total Pages : 346 pages
Book Rating : 4.7/5 (643 download)

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Book Synopsis Single-Cell-Based Models in Biology and Medicine by : Alexander Anderson

Download or read book Single-Cell-Based Models in Biology and Medicine written by Alexander Anderson and published by Springer Science & Business Media. This book was released on 2007-08-08 with total page 346 pages. Available in PDF, EPUB and Kindle. Book excerpt: Aimed at postgraduate students in a variety of biology-related disciplines, this volume presents a collection of mathematical and computational single-cell-based models and their application. The main sections cover four general model groupings: hybrid cellular automata, cellular potts, lattice-free cells, and viscoelastic cells. Each section is introduced by a discussion of the applicability of the particular modelling approach and its advantages and disadvantages, which will make the book suitable for students starting research in mathematical biology as well as scientists modelling multicellular processes.

Advances in Protein Molecular and Structural Biology Methods

Author : Timir Tripathi
Publisher : Academic Press
ISBN 13 : 0323902650
Total Pages : 716 pages
Book Rating : 4.3/5 (239 download)

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Book Synopsis Advances in Protein Molecular and Structural Biology Methods by : Timir Tripathi

Download or read book Advances in Protein Molecular and Structural Biology Methods written by Timir Tripathi and published by Academic Press. This book was released on 2022-01-14 with total page 716 pages. Available in PDF, EPUB and Kindle. Book excerpt: Advances in Protein Molecular and Structural Biology Methods offers a complete overview of the latest tools and methods applicable to the study of proteins at the molecular and structural level. The book begins with sections exploring tools to optimize recombinant protein expression and biophysical techniques such as fluorescence spectroscopy, NMR, mass spectrometry, cryo-electron microscopy, and X-ray crystallography. It then moves towards computational approaches, considering structural bioinformatics, molecular dynamics simulations, and deep machine learning technologies. The book also covers methods applied to intrinsically disordered proteins (IDPs)followed by chapters on protein interaction networks, protein function, and protein design and engineering. It provides researchers with an extensive toolkit of methods and techniques to draw from when conducting their own experimental work, taking them from foundational concepts to practical application. - Presents a thorough overview of the latest and emerging methods and technologies for protein study - Explores biophysical techniques, including nuclear magnetic resonance, X-ray crystallography, and cryo-electron microscopy - Includes computational and machine learning methods - Features a section dedicated to tools and techniques specific to studying intrinsically disordered proteins

HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences

Author : Sandra Gesing
Publisher : IOS Press
ISBN 13 : 1614990530
Total Pages : 232 pages
Book Rating : 4.6/5 (149 download)

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Book Synopsis HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences by : Sandra Gesing

Download or read book HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences written by Sandra Gesing and published by IOS Press. This book was released on 2012 with total page 232 pages. Available in PDF, EPUB and Kindle. Book excerpt:

Encyclopedia of Bioinformatics and Computational Biology

Author :
Publisher : Elsevier
ISBN 13 : 0128114320
Total Pages : 3421 pages
Book Rating : 4.1/5 (281 download)

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Book Synopsis Encyclopedia of Bioinformatics and Computational Biology by :

Download or read book Encyclopedia of Bioinformatics and Computational Biology written by and published by Elsevier. This book was released on 2018-08-21 with total page 3421 pages. Available in PDF, EPUB and Kindle. Book excerpt: Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics, Three Volume Set combines elements of computer science, information technology, mathematics, statistics and biotechnology, providing the methodology and in silico solutions to mine biological data and processes. The book covers Theory, Topics and Applications, with a special focus on Integrative –omics and Systems Biology. The theoretical, methodological underpinnings of BCB, including phylogeny are covered, as are more current areas of focus, such as translational bioinformatics, cheminformatics, and environmental informatics. Finally, Applications provide guidance for commonly asked questions. This major reference work spans basic and cutting-edge methodologies authored by leaders in the field, providing an invaluable resource for students, scientists, professionals in research institutes, and a broad swath of researchers in biotechnology and the biomedical and pharmaceutical industries. Brings together information from computer science, information technology, mathematics, statistics and biotechnology Written and reviewed by leading experts in the field, providing a unique and authoritative resource Focuses on the main theoretical and methodological concepts before expanding on specific topics and applications Includes interactive images, multimedia tools and crosslinking to further resources and databases

Transactions on Computational Systems Biology X

Author : Corrado Priami
Publisher : Springer Science & Business Media
ISBN 13 : 3540922725
Total Pages : 204 pages
Book Rating : 4.5/5 (49 download)

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Book Synopsis Transactions on Computational Systems Biology X by : Corrado Priami

Download or read book Transactions on Computational Systems Biology X written by Corrado Priami and published by Springer Science & Business Media. This book was released on 2008-12-18 with total page 204 pages. Available in PDF, EPUB and Kindle. Book excerpt: Technology is taking us to a world where myriads of heavily networked devices interact with the physical world in multiple ways, and at many levels, from the globalInternetdowntomicroandnanodevices. Manyofthesedevicesarehighly mobile and autonomous and must adapt to the surrounding environment in a totally unsupervised way. A fundamental research challenge is the design of robust decentralized c- puting systemsthat arecapableofoperating in changing environmentsandwith noisy input, and yet exhibit the desired behavior and response time, under c- straints such as energy consumption, size, and processing power. These systems should be able to adapt and learn how to react to unforeseen scenarios as well as to display properties comparable to social entities. The observation of nature has brought us many great and unforeseen concepts. Biological systems are able to handle many of these challenges with an elegance and e?ciency far beyond currenthumanartifacts. Basedonthisobservation,bio-inspiredapproacheshave been proposed as a means of handling the complexity of such systems. The goal is to obtain methods to engineer technical systems, which are of a stability and e?ciency comparable to those found in biological entities. This Special Issue on Biological and Biologically-inspired Communication contains the best papers from the Second International Conference on Bio- Inspired Models of Network, Information, and Computing Systems (BIONET- ICS 2007). The BIONETICS conference aims to bring together researchers and scientistsfromseveraldisciplines incomputerscienceandengineeringwhereb- inspired methods are investigated, as well as from bioinformatics, to deepen the information exchange and collaboration among the di?erent communities.

Tools, Techniques and Assessment in Biology

Author : John Adds
Publisher : Nelson Thornes
ISBN 13 : 9780174482734
Total Pages : 164 pages
Book Rating : 4.4/5 (827 download)

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Book Synopsis Tools, Techniques and Assessment in Biology by : John Adds

Download or read book Tools, Techniques and Assessment in Biology written by John Adds and published by Nelson Thornes. This book was released on 1999 with total page 164 pages. Available in PDF, EPUB and Kindle. Book excerpt: Nelson Advanced Science Biology is a complete series of lively, high quality, affordable student books for senior secondary students of Biology and Human Biology.

The Biology of Thought

Author : Krishnagopal Dharani
Publisher : Academic Press
ISBN 13 : 0128011610
Total Pages : 248 pages
Book Rating : 4.1/5 (28 download)

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Book Synopsis The Biology of Thought by : Krishnagopal Dharani

Download or read book The Biology of Thought written by Krishnagopal Dharani and published by Academic Press. This book was released on 2014-08-28 with total page 248 pages. Available in PDF, EPUB and Kindle. Book excerpt: The question of "what is thought" has intrigued society for ages, yet it is still a puzzle how the human brain can produce a myriad of thoughts and can store seemingly endless memories. All we know is that sensations received from the outside world imprint some sort of molecular signatures in neurons – or perhaps synapses – for future retrieval. What are these molecular signatures, and how are they made? How are thoughts generated and stored in neurons? The Biology of Thought explores these issues and proposes a new molecular model that sheds light on the basis of human thought. Step-by-step it describes a new hypothesis for how thought is produced at the micro-level in the brain – right at the neuron. Despite its many advances, the neurobiology field lacks a comprehensive explanation of the fundamental aspects of thought generation at the neuron level, and its relation to intelligence and memory. Derived from existing research in the field, this book attempts to lay biological foundations for this phenomenon through a novel mechanism termed the "Molecular-Grid Model" that may explain how biological electrochemical events occurring at the neuron interact to generate thoughts. The proposed molecular model is a testable hypothesis that hopes to change the way we understand critical brain function, and provides a starting point for major advances in this field that will be of interest to neuroscientists the world over. - Written to provide a comprehensive coverage of the electro-chemical events that occur at the neuron and how they interact to generate thought - Provides physiology-based chapters (functional anatomy, neuron physiology, memory) and the molecular mechanisms that may shape thought - Contains a thorough description of the process by which neurons convert external stimuli to primary thoughts

Grid Computing for Bioinformatics and Computational Biology

Author : El-Ghazali Talbi
Publisher : John Wiley & Sons
ISBN 13 : 9780470191620
Total Pages : 400 pages
Book Rating : 4.1/5 (916 download)

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Book Synopsis Grid Computing for Bioinformatics and Computational Biology by : El-Ghazali Talbi

Download or read book Grid Computing for Bioinformatics and Computational Biology written by El-Ghazali Talbi and published by John Wiley & Sons. This book was released on 2007-12-04 with total page 400 pages. Available in PDF, EPUB and Kindle. Book excerpt: The only single, up-to-date source for Grid issues in bioinformatics and biology Bioinformatics is fast emerging as an important discipline for academic research and industrial applications, creating a need for the use of Grid computing techniques for large-scale distributed applications. This book successfully presents Grid algorithms and their real-world applications, provides details on modern and ongoing research, and explores software frameworks that integrate bioinformatics and computational biology. Additional coverage includes: * Bio-ontology and data mining * Data visualization * DNA assembly, clustering, and mapping * Molecular evolution and phylogeny * Gene expression and micro-arrays * Molecular modeling and simulation * Sequence search and alignment * Protein structure prediction * Grid infrastructure, middleware, and tools for bio data Grid Computing for Bioinformatics and Computational Biology is an indispensable resource for professionals in several research and development communities including bioinformatics, computational biology, Grid computing, data mining, and more. It also serves as an ideal textbook for undergraduate- and graduate-level courses in bioinformatics and Grid computing.

Distributed, High-Performance and Grid Computing in Computational Biology

Author : Werner Dubitzky
Publisher : Springer Science & Business Media
ISBN 13 : 3540698418
Total Pages : 202 pages
Book Rating : 4.5/5 (46 download)

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Book Synopsis Distributed, High-Performance and Grid Computing in Computational Biology by : Werner Dubitzky

Download or read book Distributed, High-Performance and Grid Computing in Computational Biology written by Werner Dubitzky and published by Springer Science & Business Media. This book was released on 2007-01-03 with total page 202 pages. Available in PDF, EPUB and Kindle. Book excerpt: The book constitutes the refereed proceedings of the International Workshop on Distributed, High-Performance and Grid Computing in Computational Biology, GCCB 2006, held in Eilat, Israel in January 2007 in conjunction with the 5th European Conference on Computational Biology, ECCB 2006. The 13 revised full papers presented were carefully reviewed and selected from many high quality submissions.

Computational Structural Biology: Methods And Applications

Author : Torsten Schwede
Publisher : World Scientific
ISBN 13 : 9814472417
Total Pages : 790 pages
Book Rating : 4.8/5 (144 download)

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Book Synopsis Computational Structural Biology: Methods And Applications by : Torsten Schwede

Download or read book Computational Structural Biology: Methods And Applications written by Torsten Schwede and published by World Scientific. This book was released on 2008-05-02 with total page 790 pages. Available in PDF, EPUB and Kindle. Book excerpt: Computational structural biology has made tremendous progress over the last two decades, and this book provides a recent and broad overview of such computational methods in structural biology. It covers the impact of computational structural biology on protein structure prediction methods, macromolecular function and protein design, and key methods in drug discovery. It also addresses the computational challenges of experimental approaches in structural biology. In addition to reviewing the current state of computational structural biology, each chapter ends with a brief, visionary discussion on the future outlook, whereby the main challenges for the coming years are elucidated. Written by an international panel of expert contributors, this book can serve as a reference manual for students and practitioners alike.

Cryo-Electron Microscopy in Structural Biology

Author : Krishnarao Appasani
Publisher : CRC Press
ISBN 13 : 1040118844
Total Pages : 488 pages
Book Rating : 4.0/5 (41 download)

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Book Synopsis Cryo-Electron Microscopy in Structural Biology by : Krishnarao Appasani

Download or read book Cryo-Electron Microscopy in Structural Biology written by Krishnarao Appasani and published by CRC Press. This book was released on 2024-10-17 with total page 488 pages. Available in PDF, EPUB and Kindle. Book excerpt: Cryo-electron microscopy, in combination with tomography, has emerged as a new technology for visualizing molecular structures at a resolution beyond even 1 Å. Using this technology has revealed the native molecular details of viruses, membranes, enzymes, ribosomes, and cells. This comprehensive volume brings together authoritative overviews of these methods from structural and biological perspectives. It is a must-have for researchers and graduate students, as well as those working in industry, primarily in the areas of biophysics, structural biology, crystallography, and genomics. Key Features • Focuses on the applications of cryo-EM to structural biology • Documents the importance of cryo-EM/ET approaches in studying the structural determinants of cellular organelle and membrane protein biochemistry • Reviews the applications of high-resolution structures of viruses • Emphasizes structural insights of nuclear and gene machineries • Includes a section focused entirely on the applications of cryo-EM/ET in drug discovery and therapeutic development

Modelling and Simulation in Science

Author : V. Di Ges
Publisher : World Scientific
ISBN 13 : 9812779442
Total Pages : 350 pages
Book Rating : 4.8/5 (127 download)

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Book Synopsis Modelling and Simulation in Science by : V. Di Ges

Download or read book Modelling and Simulation in Science written by V. Di Ges and published by World Scientific. This book was released on 2007 with total page 350 pages. Available in PDF, EPUB and Kindle. Book excerpt: This proceedings volume contains results presented at the Sixth International Workshop on Data Analysis in Astronomy ? ?Modeling and Simulation in Science? held on April 15-22, 2007, at the Ettore Majorana Foundation and Center for Scientific Culture, Erice, Italy. Recent progress and new trends in the field of simulation and modeling in three branches of science ? astrophysics, biology, and climatology ? are described in papers presented by outstanding scientists. The impact of new technologies on the design of novel data analysis systems and the interrelation among different fields are foremost in scientists' minds in the modern era. This book therefore focuses primarily on data analysis methodologies and techniques.

Modeling And Simulation In Science - Proceedings Of The 6th International Workshop On Data Analysis In Astronomy «Livio Scarsi»

Author : Giosue Lo Bosco
Publisher : World Scientific
ISBN 13 : 9814472271
Total Pages : 350 pages
Book Rating : 4.8/5 (144 download)

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Book Synopsis Modeling And Simulation In Science - Proceedings Of The 6th International Workshop On Data Analysis In Astronomy «Livio Scarsi» by : Giosue Lo Bosco

Download or read book Modeling And Simulation In Science - Proceedings Of The 6th International Workshop On Data Analysis In Astronomy «Livio Scarsi» written by Giosue Lo Bosco and published by World Scientific. This book was released on 2007-12-13 with total page 350 pages. Available in PDF, EPUB and Kindle. Book excerpt: This proceedings volume contains results presented at the Sixth International Workshop on Data Analysis in Astronomy — “Modeling and Simulation in Science” held on April 15-22, 2007, at the Ettore Majorana Foundation and Center for Scientific Culture, Erice, Italy. Recent progress and new trends in the field of simulation and modeling in three branches of science — astrophysics, biology, and climatology — are described in papers presented by outstanding scientists. The impact of new technologies on the design of novel data analysis systems and the interrelation among different fields are foremost in scientists' minds in the modern era. This book therefore focuses primarily on data analysis methodologies and techniques.

e-Research Collaboration

Author : Murugan Anandarajan
Publisher : Springer Science & Business Media
ISBN 13 : 3642122574
Total Pages : 333 pages
Book Rating : 4.6/5 (421 download)

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Book Synopsis e-Research Collaboration by : Murugan Anandarajan

Download or read book e-Research Collaboration written by Murugan Anandarajan and published by Springer Science & Business Media. This book was released on 2010-07-01 with total page 333 pages. Available in PDF, EPUB and Kindle. Book excerpt: Research 2.0 is now a critical component in research management. This book describes how Web 2.0 technologies can help researchers collaborate. It contains examples of web portals including MyNetResearch and discusses critical aspects of research management.